RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 FHDC1Q9C0D6 1143 aaPredicted RBP20.93■□□□□ 0.94
CLCN6-204ENST00000376491 RTL1A6NKG5 1358 aa20.93■□□□□ 0.94
CLCN6-204ENST00000376491 KIF20BQ96Q89 1820 aa20.92■□□□□ 0.94
CLCN6-204ENST00000376491 AKT1S1Q96B36 256 aa20.92■□□□□ 0.94
CLCN6-204ENST00000376491 LY75O60449 1722 aa20.91■□□□□ 0.94
CLCN6-204ENST00000376491 NSD2O96028 1365 aa20.91■□□□□ 0.94
CLCN6-204ENST00000376491 QSER1Q2KHR3 1735 aa20.91■□□□□ 0.94
CLCN6-204ENST00000376491 SYTL4Q96C24 671 aaPredicted RBP20.91■□□□□ 0.94
CLCN6-204ENST00000376491 KCNQ4P56696 695 aa20.9■□□□□ 0.94
CLCN6-204ENST00000376491 SLC27A3Q5K4L6 730 aa20.9■□□□□ 0.94
CLCN6-204ENST00000376491 USHBP1Q8N6Y0 703 aa20.9■□□□□ 0.94
CLCN6-204ENST00000376491 TUBGCP6Q96RT7 1819 aa20.9■□□□□ 0.94
CLCN6-204ENST00000376491 HSP90AB2PQ58FF8 381 aa20.88■□□□□ 0.93
CLCN6-204ENST00000376491 CARD14Q9BXL6 1004 aa20.88■□□□□ 0.93
CLCN6-204ENST00000376491 ARXQ96QS3 562 aa20.87■□□□□ 0.93
CLCN6-204ENST00000376491 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
CLCN6-204ENST00000376491 COL24A1Q17RW2 1714 aa20.86■□□□□ 0.93
CLCN6-204ENST00000376491 INSRP06213 1382 aa20.85■□□□□ 0.93
CLCN6-204ENST00000376491 PNPLA7Q6ZV29 1317 aa20.85■□□□□ 0.93
CLCN6-204ENST00000376491 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
CLCN6-204ENST00000376491 SMG6Q86US8 1419 aaKnown RBP20.84■□□□□ 0.93
CLCN6-204ENST00000376491 FLT4P35916 1363 aa20.84■□□□□ 0.93
CLCN6-204ENST00000376491 SLC16A10Q8TF71 515 aa20.83■□□□□ 0.93
CLCN6-204ENST00000376491 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
CLCN6-204ENST00000376491 MAP3K5Q99683 1374 aa20.83■□□□□ 0.92
CLCN6-204ENST00000376491 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
CLCN6-204ENST00000376491 TFCP2L1Q9NZI6 479 aa20.82■□□□□ 0.92
CLCN6-204ENST00000376491 CHD4Q14839 1912 aa20.82■□□□□ 0.92
CLCN6-204ENST00000376491 KIF24Q5T7B8 1368 aa20.82■□□□□ 0.92
CLCN6-204ENST00000376491 TATP17735 454 aaPredicted RBP20.81■□□□□ 0.92
CLCN6-204ENST00000376491 CCNL1Q9UK58 526 aaPredicted RBP20.81■□□□□ 0.92
CLCN6-204ENST00000376491 EMILIN1Q9Y6C2 1016 aa20.81■□□□□ 0.92
CLCN6-204ENST00000376491 MAP2P11137 1827 aaKnown RBP20.79■□□□□ 0.92
CLCN6-204ENST00000376491 UTRNP46939 3433 aa20.78■□□□□ 0.92
CLCN6-204ENST00000376491 CYP27B1O15528 508 aa20.78■□□□□ 0.92
CLCN6-204ENST00000376491 TIMELESSQ9UNS1 1208 aa20.78■□□□□ 0.92
CLCN6-204ENST00000376491 ANKRD26Q9UPS8 1709 aa20.78■□□□□ 0.92
CLCN6-204ENST00000376491 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
CLCN6-204ENST00000376491 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
CLCN6-204ENST00000376491 ITGB4P16144 1822 aa20.77■□□□□ 0.92
CLCN6-204ENST00000376491 TOGARAM1Q9Y4F4 1720 aa20.77■□□□□ 0.92
CLCN6-204ENST00000376491 PKD1L3Q7Z443 1732 aa20.76■□□□□ 0.91
CLCN6-204ENST00000376491 POLD1P28340 1107 aa20.76■□□□□ 0.91
CLCN6-204ENST00000376491 NCAPD2Q15021 1401 aa20.76■□□□□ 0.91
CLCN6-204ENST00000376491 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
CLCN6-204ENST00000376491 C5P01031 1676 aa20.75■□□□□ 0.91
CLCN6-204ENST00000376491 COL23A1Q86Y22 540 aaPredicted RBP20.75■□□□□ 0.91
CLCN6-204ENST00000376491 ZNF784Q8NCA9 323 aaPredicted RBP20.75■□□□□ 0.91
CLCN6-204ENST00000376491 PPM1GO15355 546 aaPredicted RBP20.74■□□□□ 0.91
CLCN6-204ENST00000376491 KLHL34Q8N239 644 aa20.74■□□□□ 0.91
CLCN6-204ENST00000376491 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
CLCN6-204ENST00000376491 WASHC2AQ641Q2 1341 aa20.73■□□□□ 0.91
CLCN6-204ENST00000376491 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
CLCN6-204ENST00000376491 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
CLCN6-204ENST00000376491 CLSPNQ9HAW4 1339 aa20.72■□□□□ 0.91
CLCN6-204ENST00000376491 NLGN2Q8NFZ4 835 aa20.71■□□□□ 0.91
CLCN6-204ENST00000376491 EYA1Q99502 592 aa20.71■□□□□ 0.91
CLCN6-204ENST00000376491 POLKQ9UBT6 870 aa20.71■□□□□ 0.91
CLCN6-204ENST00000376491 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
CLCN6-204ENST00000376491 GPR162Q16538 588 aa20.7■□□□□ 0.9
CLCN6-204ENST00000376491 MSH5O43196 834 aa20.69■□□□□ 0.9
CLCN6-204ENST00000376491 MSL1Q68DK7 614 aa20.68■□□□□ 0.9
CLCN6-204ENST00000376491 PIGBQ92521 554 aa20.68■□□□□ 0.9
CLCN6-204ENST00000376491 POLR3GLQ9BT43 218 aa20.68■□□□□ 0.9
CLCN6-204ENST00000376491 C4BP0C0L5 1744 aa20.67■□□□□ 0.9
CLCN6-204ENST00000376491 AMIGO3Q86WK7 504 aa20.66■□□□□ 0.9
CLCN6-204ENST00000376491 SMARCC1Q92922 1105 aaPredicted RBP20.66■□□□□ 0.9
CLCN6-204ENST00000376491 SPG7Q9UQ90 795 aa20.66■□□□□ 0.9
CLCN6-204ENST00000376491 UBR3Q6ZT12 1888 aa20.65■□□□□ 0.9
CLCN6-204ENST00000376491 PELP1Q8IZL8 1130 aaKnown RBP20.65■□□□□ 0.9
CLCN6-204ENST00000376491 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.89
CLCN6-204ENST00000376491 EIF4A2Q14240 407 aaKnown RBP20.64■□□□□ 0.89
CLCN6-204ENST00000376491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.64■□□□□ 0.894e-9■■□□□ 12.8
CLCN6-204ENST00000376491 SMIM5Q71RC9 77 aa20.63■□□□□ 0.89
CLCN6-204ENST00000376491 HSPA5P11021 654 aaKnown RBP20.62■□□□□ 0.89
CLCN6-204ENST00000376491 PHKG2P15735 406 aa20.62■□□□□ 0.89
CLCN6-204ENST00000376491 YBX3P16989 372 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLCN6-204ENST00000376491 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
CLCN6-204ENST00000376491 FLAD1Q8NFF5 587 aa20.62■□□□□ 0.89
CLCN6-204ENST00000376491 EIF4G2P78344 907 aaKnown RBP eCLIP20.61■□□□□ 0.89
CLCN6-204ENST00000376491 PANK3Q9H999 370 aa20.61■□□□□ 0.89
CLCN6-204ENST00000376491 GOLGB1Q14789 3259 aaKnown RBP20.61■□□□□ 0.89
CLCN6-204ENST00000376491 LOC102724428A0A0B4J2F2 783 aa20.6■□□□□ 0.89
CLCN6-204ENST00000376491 SIK1P57059 783 aa20.6■□□□□ 0.89
CLCN6-204ENST00000376491 IFNL2Q8IZJ0 200 aa20.6■□□□□ 0.89
CLCN6-204ENST00000376491 LINC00116Q8NCU8 138 aa20.6■□□□□ 0.89
CLCN6-204ENST00000376491 AK7Q96M32 723 aa20.6■□□□□ 0.89
CLCN6-204ENST00000376491 ASAP1Q9ULH1 1129 aa20.6■□□□□ 0.89
CLCN6-204ENST00000376491 TMOD3Q9NYL9 352 aa20.59■□□□□ 0.89
CLCN6-204ENST00000376491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.89
CLCN6-204ENST00000376491 PHF14O94880 888 aa20.58■□□□□ 0.89
CLCN6-204ENST00000376491 IGSF1Q8N6C5 1336 aa20.57■□□□□ 0.88
CLCN6-204ENST00000376491 ITPK1Q13572 414 aa20.57■□□□□ 0.88
CLCN6-204ENST00000376491 CD2APQ9Y5K6 639 aa20.57■□□□□ 0.88
CLCN6-204ENST00000376491 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
CLCN6-204ENST00000376491 GRIN3BO60391 1043 aa20.54■□□□□ 0.88
CLCN6-204ENST00000376491 SSFA2P28290 1259 aa20.54■□□□□ 0.88
CLCN6-204ENST00000376491 ATP6V1AP38606 617 aa20.54■□□□□ 0.88
CLCN6-204ENST00000376491 PLEKHG2Q9H7P9 1386 aa20.54■□□□□ 0.88
CLCN6-204ENST00000376491 C1QTNF8P60827 252 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms