RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 NSD2O96028 1365 aa19.54■□□□□ 0.72
CLCN6-203ENST00000376490 PARD3Q8TEW0 1356 aa19.54■□□□□ 0.72
CLCN6-203ENST00000376490 RGPD3A6NKT7 1758 aaPredicted RBP19.53■□□□□ 0.72
CLCN6-203ENST00000376490 RGPD4Q7Z3J3 1758 aa19.53■□□□□ 0.72
CLCN6-203ENST00000376490 BTAF1O14981 1849 aa19.53■□□□□ 0.72
CLCN6-203ENST00000376490 PER1O15534 1290 aaPredicted RBP19.52■□□□□ 0.72
CLCN6-203ENST00000376490 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.72
CLCN6-203ENST00000376490 RAPGEF4Q8WZA2 1011 aa19.52■□□□□ 0.72
CLCN6-203ENST00000376490 TATP17735 454 aaPredicted RBP19.51■□□□□ 0.71
CLCN6-203ENST00000376490 AMER1Q5JTC6 1135 aaPredicted RBP19.51■□□□□ 0.71
CLCN6-203ENST00000376490 PROM2Q8N271 834 aa19.5■□□□□ 0.71
CLCN6-203ENST00000376490 EYA1Q99502 592 aa19.5■□□□□ 0.71
CLCN6-203ENST00000376490 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
CLCN6-203ENST00000376490 EIF4A2Q14240 407 aaKnown RBP19.48■□□□□ 0.71
CLCN6-203ENST00000376490 NBPF14Q5TI25 921 aa19.47■□□□□ 0.71
CLCN6-203ENST00000376490 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
CLCN6-203ENST00000376490 NCAPD2Q15021 1401 aa19.45■□□□□ 0.7
CLCN6-203ENST00000376490 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
CLCN6-203ENST00000376490 CNGB1Q14028 1251 aaPredicted RBP19.45■□□□□ 0.7
CLCN6-203ENST00000376490 TXNRD1Q16881 649 aa19.45■□□□□ 0.7
CLCN6-203ENST00000376490 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
CLCN6-203ENST00000376490 SYTL4Q96C24 671 aaPredicted RBP19.44■□□□□ 0.7
CLCN6-203ENST00000376490 ITGB4P16144 1822 aa19.44■□□□□ 0.7
CLCN6-203ENST00000376490 CYP27B1O15528 508 aa19.42■□□□□ 0.7
CLCN6-203ENST00000376490 PCDH11XQ9BZA7 1347 aa19.41■□□□□ 0.7
CLCN6-203ENST00000376490 PCDH11YQ9BZA8 1340 aa19.41■□□□□ 0.7
CLCN6-203ENST00000376490 MTHFSP49914 203 aa19.4■□□□□ 0.7
CLCN6-203ENST00000376490 ANO8Q9HCE9 1232 aaPredicted RBP19.4■□□□□ 0.7
CLCN6-203ENST00000376490 SPG7Q9UQ90 795 aa19.39■□□□□ 0.69
CLCN6-203ENST00000376490 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.69
CLCN6-203ENST00000376490 LY75O60449 1722 aa19.38■□□□□ 0.69
CLCN6-203ENST00000376490 TOGARAM1Q9Y4F4 1720 aa19.37■□□□□ 0.69
CLCN6-203ENST00000376490 LRP5O75197 1615 aa19.37■□□□□ 0.69
CLCN6-203ENST00000376490 IL13P35225 146 aa19.37■□□□□ 0.69
CLCN6-203ENST00000376490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.694e-9■■□□□ 12.8
CLCN6-203ENST00000376490 NPC1L1Q9UHC9 1359 aa19.36■□□□□ 0.69
CLCN6-203ENST00000376490 LRRC4BQ9NT99 713 aa19.36■□□□□ 0.69
CLCN6-203ENST00000376490 NKX1-1Q15270 411 aaPredicted RBP19.35■□□□□ 0.69
CLCN6-203ENST00000376490 AEBP1Q8IUX7 1158 aa19.35■□□□□ 0.69
CLCN6-203ENST00000376490 KCNQ4P56696 695 aa19.34■□□□□ 0.69
CLCN6-203ENST00000376490 SLC15A2Q16348 729 aa19.34■□□□□ 0.69
CLCN6-203ENST00000376490 SULT6B1Q6IMI4 303 aa19.34■□□□□ 0.69
CLCN6-203ENST00000376490 MPRIPQ6WCQ1 1025 aa19.34■□□□□ 0.69
CLCN6-203ENST00000376490 STK32BQ9NY57 414 aa19.34■□□□□ 0.69
CLCN6-203ENST00000376490 PHKG2P15735 406 aa19.33■□□□□ 0.68
CLCN6-203ENST00000376490 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
CLCN6-203ENST00000376490 PDGFDQ9GZP0 370 aaPredicted RBP19.33■□□□□ 0.68
CLCN6-203ENST00000376490 CASZ1Q86V15 1759 aa19.32■□□□□ 0.68
CLCN6-203ENST00000376490 PAPPAQ13219 1627 aa19.32■□□□□ 0.68
CLCN6-203ENST00000376490 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
CLCN6-203ENST00000376490 SLC27A3Q5K4L6 730 aa19.31■□□□□ 0.68
CLCN6-203ENST00000376490 TAF1LQ8IZX4 1826 aa19.3■□□□□ 0.68
CLCN6-203ENST00000376490 DIAPH1O60610 1272 aaKnown RBP19.29■□□□□ 0.68
CLCN6-203ENST00000376490 PIGBQ92521 554 aa19.29■□□□□ 0.68
CLCN6-203ENST00000376490 VIRMAQ69YN4 1812 aaKnown RBP19.29■□□□□ 0.68
CLCN6-203ENST00000376490 TUBGCP6Q96RT7 1819 aa19.28■□□□□ 0.68
CLCN6-203ENST00000376490 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
CLCN6-203ENST00000376490 ZNF827Q17R98 1081 aa19.28■□□□□ 0.68
CLCN6-203ENST00000376490 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
CLCN6-203ENST00000376490 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
CLCN6-203ENST00000376490 HMOX1P09601 288 aa19.27■□□□□ 0.68
CLCN6-203ENST00000376490 ZNF530Q6P9A1 599 aaPredicted RBP19.27■□□□□ 0.68
CLCN6-203ENST00000376490 AKT1S1Q96B36 256 aa19.27■□□□□ 0.68
CLCN6-203ENST00000376490 SPON1Q9HCB6 807 aa19.27■□□□□ 0.68
CLCN6-203ENST00000376490 KDRP35968 1356 aa19.27■□□□□ 0.68
CLCN6-203ENST00000376490 PLEKHG2Q9H7P9 1386 aa19.27■□□□□ 0.68
CLCN6-203ENST00000376490 QSER1Q2KHR3 1735 aa19.25■□□□□ 0.67
CLCN6-203ENST00000376490 ZBTB7AO95365 584 aa19.25■□□□□ 0.67
CLCN6-203ENST00000376490 TMOD3Q9NYL9 352 aa19.25■□□□□ 0.67
CLCN6-203ENST00000376490 C5P01031 1676 aa19.24■□□□□ 0.67
CLCN6-203ENST00000376490 COL3A1P02461 1466 aaPredicted RBP19.24■□□□□ 0.67
CLCN6-203ENST00000376490 PALLDQ8WX93 1383 aa19.24■□□□□ 0.67
CLCN6-203ENST00000376490 SMARCC1Q92922 1105 aaPredicted RBP19.24■□□□□ 0.67
CLCN6-203ENST00000376490 ATF5Q9Y2D1 282 aaPredicted RBP19.24■□□□□ 0.67
CLCN6-203ENST00000376490 SCN11AQ9UI33 1791 aa19.24■□□□□ 0.67
CLCN6-203ENST00000376490 PPP2R1AP30153 589 aa19.23■□□□□ 0.67
CLCN6-203ENST00000376490 DCAF5Q96JK2 942 aa19.23■□□□□ 0.67
CLCN6-203ENST00000376490 ASAP1Q9ULH1 1129 aa19.23■□□□□ 0.67
CLCN6-203ENST00000376490 U2SURPO15042 1029 aaKnown RBP19.22■□□□□ 0.67
CLCN6-203ENST00000376490 HSP90AB1P08238 724 aaKnown RBP19.22■□□□□ 0.67
CLCN6-203ENST00000376490 C1orf141Q5JVX7 400 aa19.22■□□□□ 0.67
CLCN6-203ENST00000376490 TFCP2L1Q9NZI6 479 aa19.22■□□□□ 0.67
CLCN6-203ENST00000376490 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
CLCN6-203ENST00000376490 KDM6AO15550 1401 aaPredicted RBP19.2■□□□□ 0.66
CLCN6-203ENST00000376490 ATG3Q9NT62 314 aa19.2■□□□□ 0.66
CLCN6-203ENST00000376490 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
CLCN6-203ENST00000376490 PNPLA7Q6ZV29 1317 aa19.19■□□□□ 0.66
CLCN6-203ENST00000376490 PTGER2P43116 358 aa19.18■□□□□ 0.66
CLCN6-203ENST00000376490 CABP4P57796 275 aa19.18■□□□□ 0.66
CLCN6-203ENST00000376490 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
CLCN6-203ENST00000376490 MTHFSDQ2M296 383 aaKnown RBP19.18■□□□□ 0.66
CLCN6-203ENST00000376490 MTFR1LQ9H019 292 aa19.18■□□□□ 0.66
CLCN6-203ENST00000376490 PPP1R1BQ9UD71 204 aaPredicted RBP19.18■□□□□ 0.66
CLCN6-203ENST00000376490 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
CLCN6-203ENST00000376490 SIK1P57059 783 aa19.17■□□□□ 0.66
CLCN6-203ENST00000376490 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
CLCN6-203ENST00000376490 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
CLCN6-203ENST00000376490 LGR6Q9HBX8 967 aa19.17■□□□□ 0.66
CLCN6-203ENST00000376490 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
CLCN6-203ENST00000376490 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms