RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 IP6K1Q92551 441 aa19.04■□□□□ 0.64
CCHCR1-201ENST00000376266 CPDO75976 1380 aa19.03■□□□□ 0.64
CCHCR1-201ENST00000376266 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
CCHCR1-201ENST00000376266 IGHDP01880 384 aa19.03■□□□□ 0.64
CCHCR1-201ENST00000376266 PANK2Q9BZ23 570 aa19.03■□□□□ 0.64
CCHCR1-201ENST00000376266 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
CCHCR1-201ENST00000376266 GZF1Q9H116 711 aaPredicted RBP19.02■□□□□ 0.64
CCHCR1-201ENST00000376266 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
CCHCR1-201ENST00000376266 FSD2A1L4K1 749 aa19.01■□□□□ 0.63
CCHCR1-201ENST00000376266 LTV1Q96GA3 475 aaPredicted RBP19.01■□□□□ 0.63
CCHCR1-201ENST00000376266 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
CCHCR1-201ENST00000376266 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
CCHCR1-201ENST00000376266 COL3A1P02461 1466 aaPredicted RBP19■□□□□ 0.63
CCHCR1-201ENST00000376266 RTL1A6NKG5 1358 aa19■□□□□ 0.63
CCHCR1-201ENST00000376266 DIAPH1O60610 1272 aaKnown RBP19■□□□□ 0.63
CCHCR1-201ENST00000376266 SLFN5Q08AF3 891 aa19■□□□□ 0.63
CCHCR1-201ENST00000376266 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
CCHCR1-201ENST00000376266 ZNF521Q96K83 1311 aa18.99■□□□□ 0.63
CCHCR1-201ENST00000376266 EIF4A2Q14240 407 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-201ENST00000376266 BCAR3O75815 825 aa18.98■□□□□ 0.63
CCHCR1-201ENST00000376266 IL13P35225 146 aa18.98■□□□□ 0.63
CCHCR1-201ENST00000376266 COL18A1P39060 1754 aa18.98■□□□□ 0.63
CCHCR1-201ENST00000376266 LRP6O75581 1613 aa18.97■□□□□ 0.63
CCHCR1-201ENST00000376266 U2SURPO15042 1029 aaKnown RBP18.97■□□□□ 0.63
CCHCR1-201ENST00000376266 MCM4P33991 863 aa18.97■□□□□ 0.63
CCHCR1-201ENST00000376266 RGPD5Q99666 1765 aa18.97■□□□□ 0.63
CCHCR1-201ENST00000376266 TBC1D2Q9BYX2 928 aa18.96■□□□□ 0.63
CCHCR1-201ENST00000376266 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
CCHCR1-201ENST00000376266 CAMTA1Q9Y6Y1 1673 aa18.96■□□□□ 0.63
CCHCR1-201ENST00000376266 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
CCHCR1-201ENST00000376266 BTG4Q9NY30 223 aa18.95■□□□□ 0.62
CCHCR1-201ENST00000376266 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
CCHCR1-201ENST00000376266 ERBB3P21860 1342 aa18.94■□□□□ 0.62
CCHCR1-201ENST00000376266 U2AF1L5P0DN76 240 aaPredicted RBP18.94■□□□□ 0.62
CCHCR1-201ENST00000376266 MRE11P49959 708 aa18.94■□□□□ 0.62
CCHCR1-201ENST00000376266 U2AF1Q01081 240 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCHCR1-201ENST00000376266 LMO7Q8WWI1 1683 aa18.94■□□□□ 0.62
CCHCR1-201ENST00000376266 STRN4Q9NRL3 753 aa18.93■□□□□ 0.62
CCHCR1-201ENST00000376266 TBC1D32Q96NH3 1257 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 EYA1Q99502 592 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 COL14A1Q05707 1796 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 TRAK2O60296 914 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 CSB-PGBD3P0DP91 1061 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 MEX3CQ5U5Q3 659 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 TRMT2AQ8IZ69 625 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 CLUAP1Q96AJ1 413 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 NGLY1Q96IV0 654 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 MYH16Q9H6N6 1097 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 ABCC6O95255 1503 aa18.92■□□□□ 0.62
CCHCR1-201ENST00000376266 HMOX1P09601 288 aa18.91■□□□□ 0.62
CCHCR1-201ENST00000376266 EVA1CP58658 441 aa18.91■□□□□ 0.62
CCHCR1-201ENST00000376266 NBPF6Q5VWK0 638 aa18.91■□□□□ 0.62
CCHCR1-201ENST00000376266 NBPF4Q96M43 638 aa18.91■□□□□ 0.62
CCHCR1-201ENST00000376266 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-201ENST00000376266 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-201ENST00000376266 ESPNB1AK53 854 aa18.9■□□□□ 0.62
CCHCR1-201ENST00000376266 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
CCHCR1-201ENST00000376266 USHBP1Q8N6Y0 703 aa18.9■□□□□ 0.62
CCHCR1-201ENST00000376266 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
CCHCR1-201ENST00000376266 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.62
CCHCR1-201ENST00000376266 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.62
CCHCR1-201ENST00000376266 PDE3AQ14432 1141 aa18.89■□□□□ 0.61
CCHCR1-201ENST00000376266 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-201ENST00000376266 SULT6B1Q6IMI4 303 aa18.88■□□□□ 0.61
CCHCR1-201ENST00000376266 COG6Q9Y2V7 657 aa18.88■□□□□ 0.61
CCHCR1-201ENST00000376266 RGPD2P0DJD1 1756 aa18.88■□□□□ 0.61
CCHCR1-201ENST00000376266 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
CCHCR1-201ENST00000376266 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
CCHCR1-201ENST00000376266 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
CCHCR1-201ENST00000376266 GRPEL1Q9HAV7 217 aa18.87■□□□□ 0.61
CCHCR1-201ENST00000376266 SLIT2O94813 1529 aa18.87■□□□□ 0.61
CCHCR1-201ENST00000376266 TOM1L2Q6ZVM7 507 aa18.87■□□□□ 0.61
CCHCR1-201ENST00000376266 CHMP5Q9NZZ3 219 aa18.87■□□□□ 0.61
CCHCR1-201ENST00000376266 E9PSI1 815 aa18.87■□□□□ 0.61
CCHCR1-201ENST00000376266 PANK1Q8TE04 598 aa18.87■□□□□ 0.61
CCHCR1-201ENST00000376266 RGPD1P0DJD0 1748 aa18.86■□□□□ 0.61
CCHCR1-201ENST00000376266 APAF1O14727 1248 aa18.86■□□□□ 0.61
CCHCR1-201ENST00000376266 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
CCHCR1-201ENST00000376266 TRIM44Q96DX7 344 aaPredicted RBP18.86■□□□□ 0.61
CCHCR1-201ENST00000376266 ILDR1Q86SU0 546 aaPredicted RBP18.85■□□□□ 0.61
CCHCR1-201ENST00000376266 FCHSD2O94868 740 aa18.84■□□□□ 0.61
CCHCR1-201ENST00000376266 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
CCHCR1-201ENST00000376266 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
CCHCR1-201ENST00000376266 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
CCHCR1-201ENST00000376266 ERBB4Q15303 1308 aa18.84■□□□□ 0.61
CCHCR1-201ENST00000376266 USP21Q9UK80 565 aa18.83■□□□□ 0.61
CCHCR1-201ENST00000376266 AFF2P51816 1311 aa18.83■□□□□ 0.61
CCHCR1-201ENST00000376266 KDRP35968 1356 aa18.82■□□□□ 0.6
CCHCR1-201ENST00000376266 NWD2Q9ULI1 1742 aa18.82■□□□□ 0.6
CCHCR1-201ENST00000376266 TPM2P07951 284 aa18.82■□□□□ 0.6
CCHCR1-201ENST00000376266 PLEKHF1Q96S99 279 aa18.82■□□□□ 0.6
CCHCR1-201ENST00000376266 NRAPQ86VF7 1730 aa18.82■□□□□ 0.6
CCHCR1-201ENST00000376266 CRB1P82279 1406 aa18.81■□□□□ 0.6
CCHCR1-201ENST00000376266 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
CCHCR1-201ENST00000376266 ISY1Q9ULR0 285 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-201ENST00000376266 DDX11L8A8MPP1 907 aa18.81■□□□□ 0.6
CCHCR1-201ENST00000376266 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
CCHCR1-201ENST00000376266 PDZRN3Q9UPQ7 1066 aa18.81■□□□□ 0.6
CCHCR1-201ENST00000376266 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-201ENST00000376266 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms