RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 EXOSC9Q06265 439 aaKnown RBP14.37□□□□□ -0.11
PDPN-202ENST00000376057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDPN-202ENST00000376057 CEMIPQ8WUJ3 1361 aa14.36□□□□□ -0.11
PDPN-202ENST00000376057 IRX6P78412 446 aaPredicted RBP14.36□□□□□ -0.11
PDPN-202ENST00000376057 MBIPQ9NS73 344 aa14.36□□□□□ -0.11
PDPN-202ENST00000376057 MS4A1P11836 297 aa14.35□□□□□ -0.11
PDPN-202ENST00000376057 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
PDPN-202ENST00000376057 PLEKHO1Q53GL0 409 aaPredicted RBP14.35□□□□□ -0.11
PDPN-202ENST00000376057 RTF1Q92541 710 aaKnown RBP14.35□□□□□ -0.11
PDPN-202ENST00000376057 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
PDPN-202ENST00000376057 BCAR3O75815 825 aa14.34□□□□□ -0.11
PDPN-202ENST00000376057 COL14A1Q05707 1796 aaKnown RBP14.34□□□□□ -0.11
PDPN-202ENST00000376057 COL16A1Q07092 1604 aaPredicted RBP14.34□□□□□ -0.11
PDPN-202ENST00000376057 PARP4Q9UKK3 1724 aaKnown RBP14.34□□□□□ -0.11
PDPN-202ENST00000376057 AKAP4Q5JQC9 854 aa14.33□□□□□ -0.11
PDPN-202ENST00000376057 VAMP4O75379 141 aa14.33□□□□□ -0.12
PDPN-202ENST00000376057 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
PDPN-202ENST00000376057 LTV1Q96GA3 475 aaPredicted RBP14.33□□□□□ -0.12
PDPN-202ENST00000376057 SIPA1L3O60292 1781 aaPredicted RBP14.33□□□□□ -0.12
PDPN-202ENST00000376057 VIRMAQ69YN4 1812 aaKnown RBP14.33□□□□□ -0.12
PDPN-202ENST00000376057 KDM3BQ7LBC6 1761 aa14.33□□□□□ -0.12
PDPN-202ENST00000376057 FAM83GA6ND36 823 aa14.33□□□□□ -0.12
PDPN-202ENST00000376057 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.12
PDPN-202ENST00000376057 COL5A2P05997 1499 aaPredicted RBP14.32□□□□□ -0.12
PDPN-202ENST00000376057 PHLPP1O60346 1717 aa14.32□□□□□ -0.12
PDPN-202ENST00000376057 KIF16BQ96L93 1317 aa14.32□□□□□ -0.12
PDPN-202ENST00000376057 PLIN1O60240 522 aa14.31□□□□□ -0.12
PDPN-202ENST00000376057 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
PDPN-202ENST00000376057 THUMPD2Q9BTF0 503 aaKnown RBP14.31□□□□□ -0.12
PDPN-202ENST00000376057 WDR17Q8IZU2 1322 aa14.31□□□□□ -0.12
PDPN-202ENST00000376057 MCM10Q7L590 875 aa14.3□□□□□ -0.12
PDPN-202ENST00000376057 CABLES1Q8TDN4 633 aa14.3□□□□□ -0.12
PDPN-202ENST00000376057 CRBNQ96SW2 442 aa14.3□□□□□ -0.12
PDPN-202ENST00000376057 SCN11AQ9UI33 1791 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 IPO8O15397 1037 aaKnown RBP14.29□□□□□ -0.12
PDPN-202ENST00000376057 ZKSCAN2Q63HK3 967 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 IL17REQ8NFR9 667 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 SSH1Q8WYL5 1049 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 TOM1O60784 492 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 DCTN1Q14203 1278 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 C20orf194Q5TEA3 1177 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
PDPN-202ENST00000376057 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
PDPN-202ENST00000376057 MRC1P22897 1456 aa14.28□□□□□ -0.12
PDPN-202ENST00000376057 PLCH1Q4KWH8 1693 aa14.28□□□□□ -0.12
PDPN-202ENST00000376057 TWISTNBQ3B726 338 aaPredicted RBP14.28□□□□□ -0.12
PDPN-202ENST00000376057 CACNA1FO60840 1977 aa14.28□□□□□ -0.12
PDPN-202ENST00000376057 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.12
PDPN-202ENST00000376057 MRPL50Q8N5N7 158 aaKnown RBP14.27□□□□□ -0.12
PDPN-202ENST00000376057 SMC4Q9NTJ3 1288 aa14.27□□□□□ -0.12
PDPN-202ENST00000376057 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
PDPN-202ENST00000376057 CARD10Q9BWT7 1032 aa14.27□□□□□ -0.13
PDPN-202ENST00000376057 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
PDPN-202ENST00000376057 PRDM11Q9NQV5 511 aa14.27□□□□□ -0.13
PDPN-202ENST00000376057 SPG7Q9UQ90 795 aa14.27□□□□□ -0.13
PDPN-202ENST00000376057 LAS1LQ9Y4W2 734 aaKnown RBP14.27□□□□□ -0.13
PDPN-202ENST00000376057 MEGF6O75095 1541 aa14.26□□□□□ -0.13
PDPN-202ENST00000376057 TATP17735 454 aaPredicted RBP14.26□□□□□ -0.13
PDPN-202ENST00000376057 C8orf58Q8NAV2 365 aa14.26□□□□□ -0.13
PDPN-202ENST00000376057 RAPGEF4Q8WZA2 1011 aa14.26□□□□□ -0.13
PDPN-202ENST00000376057 ATF7IPQ6VMQ6 1270 aa14.26□□□□□ -0.13
PDPN-202ENST00000376057 HOXB7P09629 217 aa14.25□□□□□ -0.13
PDPN-202ENST00000376057 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
PDPN-202ENST00000376057 C1orf141Q5JVX7 400 aa14.25□□□□□ -0.13
PDPN-202ENST00000376057 TSPYL6Q8N831 410 aa14.25□□□□□ -0.13
PDPN-202ENST00000376057 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
PDPN-202ENST00000376057 RNMTO43148 476 aaKnown RBP14.24□□□□□ -0.13
PDPN-202ENST00000376057 TSPYL4Q9UJ04 414 aa14.24□□□□□ -0.13
PDPN-202ENST00000376057 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
PDPN-202ENST00000376057 CANXP27824 592 aaKnown RBP14.24□□□□□ -0.13
PDPN-202ENST00000376057 CHRNA2Q15822 529 aa14.24□□□□□ -0.13
PDPN-202ENST00000376057 DZIP1LQ8IYY4 767 aaKnown RBP14.24□□□□□ -0.13
PDPN-202ENST00000376057 B4GALNT3Q6L9W6 998 aa14.23□□□□□ -0.13
PDPN-202ENST00000376057 SHANK3Q9BYB0 1731 aa14.23□□□□□ -0.13
PDPN-202ENST00000376057 WNK3Q9BYP7 1800 aa14.23□□□□□ -0.13
PDPN-202ENST00000376057 HSP90AB1P08238 724 aaKnown RBP14.23□□□□□ -0.13
PDPN-202ENST00000376057 HEG1Q9ULI3 1381 aa14.23□□□□□ -0.13
PDPN-202ENST00000376057 NRAPQ86VF7 1730 aa14.23□□□□□ -0.13
PDPN-202ENST00000376057 MVPQ14764 893 aaKnown RBP14.23□□□□□ -0.13
PDPN-202ENST00000376057 NOB1Q9ULX3 412 aaKnown RBP14.23□□□□□ -0.13
PDPN-202ENST00000376057 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
PDPN-202ENST00000376057 TRIM27P14373 513 aa14.22□□□□□ -0.13
PDPN-202ENST00000376057 CHMP4BQ9H444 224 aaKnown RBP14.22□□□□□ -0.13
PDPN-202ENST00000376057 PTPRCP08575 1304 aa14.22□□□□□ -0.13
PDPN-202ENST00000376057 PHKG2P15735 406 aa14.22□□□□□ -0.13
PDPN-202ENST00000376057 IFNL2Q8IZJ0 200 aa14.22□□□□□ -0.13
PDPN-202ENST00000376057 N4BP2Q86UW6 1770 aaPredicted RBP14.22□□□□□ -0.13
PDPN-202ENST00000376057 KDM2BQ8NHM5 1336 aa14.21□□□□□ -0.13
PDPN-202ENST00000376057 FRAT1Q92837 279 aaPredicted RBP14.21□□□□□ -0.13
PDPN-202ENST00000376057 ABCC4O15439 1325 aa14.21□□□□□ -0.13
PDPN-202ENST00000376057 NKX1-1Q15270 411 aaPredicted RBP14.21□□□□□ -0.14
PDPN-202ENST00000376057 API5Q9BZZ5 524 aaKnown RBP14.21□□□□□ -0.14
PDPN-202ENST00000376057 DDX19BQ9UMR2 479 aa14.2□□□□□ -0.14
PDPN-202ENST00000376057 KDM6AO15550 1401 aaPredicted RBP14.2□□□□□ -0.14
PDPN-202ENST00000376057 RLBP1P12271 317 aa14.2□□□□□ -0.14
PDPN-202ENST00000376057 PANK1Q8TE04 598 aa14.2□□□□□ -0.14
PDPN-202ENST00000376057 CLUAP1Q96AJ1 413 aa14.2□□□□□ -0.14
PDPN-202ENST00000376057 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
PDPN-202ENST00000376057 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
PDPN-202ENST00000376057 DISP2A7MBM2 1401 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms