RNA–Protein interactions for RNA: ENST00000375835.8

SHC3-202, Transcript of SHC adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC3, Length 9,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-202ENST00000375835 CCDC171Q6TFL3 1326 aa20.96■□□□□ 0.95
SHC3-202ENST00000375835 WDR66Q8TBY9 1149 aa20.95■□□□□ 0.94
SHC3-202ENST00000375835 SETSIPP0DME0 302 aa20.95■□□□□ 0.94
SHC3-202ENST00000375835 MNAT1P51948 309 aa20.95■□□□□ 0.94
SHC3-202ENST00000375835 SEPT6Q14141 434 aa20.95■□□□□ 0.94
SHC3-202ENST00000375835 TICAM2Q86XR7 235 aa20.95■□□□□ 0.94
SHC3-202ENST00000375835 CFAP100Q494V2 611 aa20.95■□□□□ 0.94
SHC3-202ENST00000375835 EIF2S2P20042 333 aaKnown RBP20.95■□□□□ 0.94
SHC3-202ENST00000375835 GPATCH11Q8N954 259 aa20.95■□□□□ 0.94
SHC3-202ENST00000375835 FAM177A1Q8N128 213 aaPredicted RBP20.94■□□□□ 0.94
SHC3-202ENST00000375835 SYCE3A1L190 88 aa20.94■□□□□ 0.94
SHC3-202ENST00000375835 EIF5P55010 431 aaKnown RBP20.94■□□□□ 0.94
SHC3-202ENST00000375835 TANGO6Q9C0B7 1094 aa20.94■□□□□ 0.94
SHC3-202ENST00000375835 STMN4Q9H169 189 aaPredicted RBP20.94■□□□□ 0.94
SHC3-202ENST00000375835 PPP4R3BQ5MIZ7 849 aa20.94■□□□□ 0.94
SHC3-202ENST00000375835 CEP112Q8N8E3 955 aa20.94■□□□□ 0.94
SHC3-202ENST00000375835 SMARCC1Q92922 1105 aaPredicted RBP20.94■□□□□ 0.94
SHC3-202ENST00000375835 CTNNA3Q9UI47 895 aa20.94■□□□□ 0.94
SHC3-202ENST00000375835 LRRC9Q6ZRR7 1453 aa20.94■□□□□ 0.94
SHC3-202ENST00000375835 SH2B1Q9NRF2 756 aaPredicted RBP20.93■□□□□ 0.94
SHC3-202ENST00000375835 CCDC69A6NI79 296 aa20.93■□□□□ 0.94
SHC3-202ENST00000375835 FKBP15Q5T1M5 1219 aa20.93■□□□□ 0.94
SHC3-202ENST00000375835 LTV1Q96GA3 475 aaPredicted RBP20.93■□□□□ 0.94
SHC3-202ENST00000375835 CCDC150Q8NCX0 1101 aa20.93■□□□□ 0.94
SHC3-202ENST00000375835 SREK1Q8WXA9 508 aaKnown RBP20.93■□□□□ 0.94
SHC3-202ENST00000375835 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
SHC3-202ENST00000375835 USO1O60763 962 aaKnown RBP20.92■□□□□ 0.94
SHC3-202ENST00000375835 CLIP2Q9UDT6 1046 aa20.92■□□□□ 0.94
SHC3-202ENST00000375835 TMEM132AQ24JP5 1023 aa20.92■□□□□ 0.94
SHC3-202ENST00000375835 CBX1P83916 185 aa20.92■□□□□ 0.94
SHC3-202ENST00000375835 NKTRP30414 1462 aaKnown RBP20.91■□□□□ 0.94
SHC3-202ENST00000375835 PYM1Q9BRP8 204 aaKnown RBP20.91■□□□□ 0.94
SHC3-202ENST00000375835 RNF187Q5TA31 235 aaPredicted RBP20.91■□□□□ 0.94
SHC3-202ENST00000375835 RIC3Q7Z5B4 369 aa20.91■□□□□ 0.94
SHC3-202ENST00000375835 DAAM2Q86T65 1068 aa20.9■□□□□ 0.94
SHC3-202ENST00000375835 NEUROD6Q96NK8 337 aa20.9■□□□□ 0.94
SHC3-202ENST00000375835 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
SHC3-202ENST00000375835 STX1AQ16623 288 aa20.9■□□□□ 0.94
SHC3-202ENST00000375835 FAM114A1Q8IWE2 563 aa20.9■□□□□ 0.94
SHC3-202ENST00000375835 PAFAH1B1P43034 410 aa20.9■□□□□ 0.94
SHC3-202ENST00000375835 HOOK3Q86VS8 718 aa20.89■□□□□ 0.93
SHC3-202ENST00000375835 PAF1Q8N7H5 531 aa20.89■□□□□ 0.93
SHC3-202ENST00000375835 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
SHC3-202ENST00000375835 TOP1P11387 765 aaKnown RBP20.89■□□□□ 0.93
SHC3-202ENST00000375835 WDR63Q8IWG1 891 aa20.89■□□□□ 0.93
SHC3-202ENST00000375835 SRRTQ9BXP5 876 aaKnown RBP20.89■□□□□ 0.93
SHC3-202ENST00000375835 CPSF2Q9P2I0 782 aaKnown RBP20.89■□□□□ 0.93
SHC3-202ENST00000375835 SWAP70Q9UH65 585 aa20.89■□□□□ 0.93
SHC3-202ENST00000375835 SSR1P43307 286 aaKnown RBP20.88■□□□□ 0.93
SHC3-202ENST00000375835 DDX46Q7L014 1031 aaKnown RBP20.88■□□□□ 0.93
SHC3-202ENST00000375835 UVSSAQ2YD98 709 aa20.88■□□□□ 0.93
SHC3-202ENST00000375835 MLECQ14165 292 aa20.88■□□□□ 0.93
SHC3-202ENST00000375835 CKAP4Q07065 602 aaKnown RBP20.88■□□□□ 0.93
SHC3-202ENST00000375835 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
SHC3-202ENST00000375835 ANAPC15P60006 121 aa20.88■□□□□ 0.93
SHC3-202ENST00000375835 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
SHC3-202ENST00000375835 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
SHC3-202ENST00000375835 CCDC158Q5M9N0 1113 aa20.87■□□□□ 0.93
SHC3-202ENST00000375835 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
SHC3-202ENST00000375835 CEBPZQ03701 1054 aaKnown RBP20.87■□□□□ 0.93
SHC3-202ENST00000375835 BLOC1S2Q6QNY1 142 aa20.87■□□□□ 0.93
SHC3-202ENST00000375835 HS1BP3Q53T59 392 aa20.87■□□□□ 0.93
SHC3-202ENST00000375835 TSG101Q99816 390 aa20.87■□□□□ 0.93
SHC3-202ENST00000375835 PDRG1Q9NUG6 133 aa20.87■□□□□ 0.93
SHC3-202ENST00000375835 SEPT11Q9NVA2 429 aaKnown RBP20.86■□□□□ 0.93
SHC3-202ENST00000375835 MVPQ14764 893 aaKnown RBP20.86■□□□□ 0.93
SHC3-202ENST00000375835 YEATS4O95619 227 aa20.86■□□□□ 0.93
SHC3-202ENST00000375835 KIF6Q6ZMV9 814 aa20.85■□□□□ 0.93
SHC3-202ENST00000375835 TTC14Q96N46 770 aa20.85■□□□□ 0.93
SHC3-202ENST00000375835 IFI16Q16666 785 aaKnown RBP20.85■□□□□ 0.93
SHC3-202ENST00000375835 FYB1O15117 783 aa20.85■□□□□ 0.93
SHC3-202ENST00000375835 ARFGAP3Q9NP61 516 aa20.85■□□□□ 0.93
SHC3-202ENST00000375835 TUBBP07437 444 aa20.84■□□□□ 0.93
SHC3-202ENST00000375835 TNNT1P13805 278 aa20.84■□□□□ 0.93
SHC3-202ENST00000375835 GOLIM4O00461 696 aa20.84■□□□□ 0.93
SHC3-202ENST00000375835 HSF2BPO75031 334 aa20.84■□□□□ 0.93
SHC3-202ENST00000375835 GSTTP1A0A1W2PQM5 241 aa20.83■□□□□ 0.93
SHC3-202ENST00000375835 EVA1CP58658 441 aa20.83■□□□□ 0.93
SHC3-202ENST00000375835 TTC39AQ5SRH9 613 aa20.83■□□□□ 0.93
SHC3-202ENST00000375835 DAPK1P53355 1430 aa20.83■□□□□ 0.93
SHC3-202ENST00000375835 WDR97A6NE52 1622 aa20.83■□□□□ 0.93
SHC3-202ENST00000375835 ITSN2Q9NZM3 1697 aa20.83■□□□□ 0.93
SHC3-202ENST00000375835 IKQ13123 557 aaPredicted RBP20.83■□□□□ 0.93
SHC3-202ENST00000375835 KIF20AO95235 890 aa20.83■□□□□ 0.92
SHC3-202ENST00000375835 GTF2F1P35269 517 aaKnown RBP eCLIP20.83■□□□□ 0.92
SHC3-202ENST00000375835 DDX19AQ9NUU7 478 aaKnown RBP20.83■□□□□ 0.92
SHC3-202ENST00000375835 HMGB1P09429 215 aaKnown RBP20.83■□□□□ 0.92
SHC3-202ENST00000375835 SNW1Q13573 536 aaKnown RBP20.83■□□□□ 0.92
SHC3-202ENST00000375835 SURF6O75683 361 aaKnown RBP20.82■□□□□ 0.92
SHC3-202ENST00000375835 LMAN1P49257 510 aa20.82■□□□□ 0.92
SHC3-202ENST00000375835 KIF4BQ2VIQ3 1234 aa20.82■□□□□ 0.92
SHC3-202ENST00000375835 HFM1A2PYH4 1435 aa20.82■□□□□ 0.92
SHC3-202ENST00000375835 TIAM1Q13009 1591 aa20.82■□□□□ 0.92
SHC3-202ENST00000375835 FSD2A1L4K1 749 aa20.82■□□□□ 0.92
SHC3-202ENST00000375835 IPO4Q8TEX9 1081 aaKnown RBP20.82■□□□□ 0.92
SHC3-202ENST00000375835 RSRC1Q96IZ7 334 aaKnown RBP20.82■□□□□ 0.92
SHC3-202ENST00000375835 CCDC113Q9H0I3 377 aa20.82■□□□□ 0.92
SHC3-202ENST00000375835 CEP135Q66GS9 1140 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 ARHGAP5Q13017 1502 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 PRDM10Q9NQV6 1147 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms