RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 PTGER2P43116 358 aa20.35■□□□□ 0.85
CLIC1-206ENST00000375779 DDX54Q8TDD1 881 aaKnown RBP20.35■□□□□ 0.85
CLIC1-206ENST00000375779 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
CLIC1-206ENST00000375779 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
CLIC1-206ENST00000375779 MEGF6O75095 1541 aa20.34■□□□□ 0.85
CLIC1-206ENST00000375779 SGIP1Q9BQI5 828 aa20.34■□□□□ 0.85
CLIC1-206ENST00000375779 WASHC2AQ641Q2 1341 aa20.33■□□□□ 0.85
CLIC1-206ENST00000375779 STK32BQ9NY57 414 aa20.33■□□□□ 0.85
CLIC1-206ENST00000375779 NSD3Q9BZ95 1437 aa20.33■□□□□ 0.84
CLIC1-206ENST00000375779 NSD2O96028 1365 aa20.33■□□□□ 0.84
CLIC1-206ENST00000375779 UTRNP46939 3433 aa20.33■□□□□ 0.84
CLIC1-206ENST00000375779 SLC27A3Q5K4L6 730 aa20.32■□□□□ 0.84
CLIC1-206ENST00000375779 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
CLIC1-206ENST00000375779 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.841e-7■■■■■ 36.9
CLIC1-206ENST00000375779 AKT1S1Q96B36 256 aa20.31■□□□□ 0.84
CLIC1-206ENST00000375779 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
CLIC1-206ENST00000375779 POLKQ9UBT6 870 aa20.3■□□□□ 0.84
CLIC1-206ENST00000375779 EMILIN1Q9Y6C2 1016 aa20.3■□□□□ 0.84
CLIC1-206ENST00000375779 MAP2P11137 1827 aaKnown RBP20.3■□□□□ 0.84
CLIC1-206ENST00000375779 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
CLIC1-206ENST00000375779 MTFR1LQ9H019 292 aa20.28■□□□□ 0.84
CLIC1-206ENST00000375779 LY75O60449 1722 aa20.27■□□□□ 0.84
CLIC1-206ENST00000375779 NKX1-1Q15270 411 aaPredicted RBP20.27■□□□□ 0.84
CLIC1-206ENST00000375779 ZNF827Q17R98 1081 aa20.27■□□□□ 0.84
CLIC1-206ENST00000375779 USHBP1Q8N6Y0 703 aa20.27■□□□□ 0.84
CLIC1-206ENST00000375779 RAPGEF4Q8WZA2 1011 aa20.27■□□□□ 0.84
CLIC1-206ENST00000375779 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.83
CLIC1-206ENST00000375779 CYP27B1O15528 508 aa20.26■□□□□ 0.83
CLIC1-206ENST00000375779 QSER1Q2KHR3 1735 aa20.25■□□□□ 0.83
CLIC1-206ENST00000375779 ZBTB7AO95365 584 aa20.25■□□□□ 0.83
CLIC1-206ENST00000375779 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
CLIC1-206ENST00000375779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLIC1-206ENST00000375779 SLC16A10Q8TF71 515 aa20.24■□□□□ 0.83
CLIC1-206ENST00000375779 EYA1Q99502 592 aa20.24■□□□□ 0.83
CLIC1-206ENST00000375779 COL24A1Q17RW2 1714 aa20.24■□□□□ 0.83
CLIC1-206ENST00000375779 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
CLIC1-206ENST00000375779 CCER1Q8TC90 406 aaPredicted RBP20.23■□□□□ 0.83
CLIC1-206ENST00000375779 DOT1LQ8TEK3 1739 aa20.23■□□□□ 0.83
CLIC1-206ENST00000375779 PPP1R1BQ9UD71 204 aaPredicted RBP20.23■□□□□ 0.83
CLIC1-206ENST00000375779 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
CLIC1-206ENST00000375779 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
CLIC1-206ENST00000375779 PANK3Q9H999 370 aa20.22■□□□□ 0.83
CLIC1-206ENST00000375779 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
CLIC1-206ENST00000375779 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
CLIC1-206ENST00000375779 PKD1L3Q7Z443 1732 aa20.21■□□□□ 0.83
CLIC1-206ENST00000375779 SYT17Q9BSW7 474 aa20.2■□□□□ 0.82
CLIC1-206ENST00000375779 MAP3K5Q99683 1374 aa20.2■□□□□ 0.82
CLIC1-206ENST00000375779 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
CLIC1-206ENST00000375779 PNPLA7Q6ZV29 1317 aa20.19■□□□□ 0.82
CLIC1-206ENST00000375779 GOLGB1Q14789 3259 aaKnown RBP20.17■□□□□ 0.82
CLIC1-206ENST00000375779 HMGB2P26583 209 aaKnown RBP20.17■□□□□ 0.82
CLIC1-206ENST00000375779 KCNQ4P56696 695 aa20.17■□□□□ 0.82
CLIC1-206ENST00000375779 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
CLIC1-206ENST00000375779 ITGB4P16144 1822 aa20.16■□□□□ 0.82
CLIC1-206ENST00000375779 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
CLIC1-206ENST00000375779 FHDC1Q9C0D6 1143 aaPredicted RBP20.15■□□□□ 0.82
CLIC1-206ENST00000375779 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
CLIC1-206ENST00000375779 SPG7Q9UQ90 795 aa20.15■□□□□ 0.82
CLIC1-206ENST00000375779 TUBGCP6Q96RT7 1819 aa20.15■□□□□ 0.82
CLIC1-206ENST00000375779 IGSF1Q8N6C5 1336 aa20.14■□□□□ 0.81
CLIC1-206ENST00000375779 PIGBQ92521 554 aa20.14■□□□□ 0.81
CLIC1-206ENST00000375779 ARXQ96QS3 562 aa20.14■□□□□ 0.81
CLIC1-206ENST00000375779 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
CLIC1-206ENST00000375779 PER1O15534 1290 aaPredicted RBP20.13■□□□□ 0.81
CLIC1-206ENST00000375779 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
CLIC1-206ENST00000375779 TAF1LQ8IZX4 1826 aa20.12■□□□□ 0.81
CLIC1-206ENST00000375779 AMER1Q5JTC6 1135 aaPredicted RBP20.12■□□□□ 0.81
CLIC1-206ENST00000375779 PHKG2P15735 406 aa20.11■□□□□ 0.81
CLIC1-206ENST00000375779 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
CLIC1-206ENST00000375779 COL23A1Q86Y22 540 aaPredicted RBP20.11■□□□□ 0.81
CLIC1-206ENST00000375779 SMARCC1Q92922 1105 aaPredicted RBP20.11■□□□□ 0.81
CLIC1-206ENST00000375779 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
CLIC1-206ENST00000375779 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
CLIC1-206ENST00000375779 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
CLIC1-206ENST00000375779 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.81
CLIC1-206ENST00000375779 DCAF8L1A6NGE4 600 aa20.07■□□□□ 0.8
CLIC1-206ENST00000375779 FLAD1Q8NFF5 587 aa20.07■□□□□ 0.8
CLIC1-206ENST00000375779 KNSTRNQ9Y448 316 aa20.07■□□□□ 0.8
CLIC1-206ENST00000375779 KIF7Q2M1P5 1343 aa20.06■□□□□ 0.8
CLIC1-206ENST00000375779 YY1P25490 414 aa20.06■□□□□ 0.8
CLIC1-206ENST00000375779 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
CLIC1-206ENST00000375779 C5P01031 1676 aa20.06■□□□□ 0.8
CLIC1-206ENST00000375779 ERVV-2B6SEH9 535 aa20.05■□□□□ 0.8
CLIC1-206ENST00000375779 KDRP35968 1356 aa20.05■□□□□ 0.8
CLIC1-206ENST00000375779 IL13P35225 146 aa20.04■□□□□ 0.8
CLIC1-206ENST00000375779 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
CLIC1-206ENST00000375779 POLD1P28340 1107 aa20.03■□□□□ 0.8
CLIC1-206ENST00000375779 SIK1P57059 783 aa20.03■□□□□ 0.8
CLIC1-206ENST00000375779 AMOTQ4VCS5 1084 aa20.03■□□□□ 0.8
CLIC1-206ENST00000375779 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
CLIC1-206ENST00000375779 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
CLIC1-206ENST00000375779 DCAF5Q96JK2 942 aa20.02■□□□□ 0.8
CLIC1-206ENST00000375779 ATG3Q9NT62 314 aa20.02■□□□□ 0.8
CLIC1-206ENST00000375779 C4BP0C0L5 1744 aa20.02■□□□□ 0.79
CLIC1-206ENST00000375779 UBR3Q6ZT12 1888 aa20.01■□□□□ 0.79
CLIC1-206ENST00000375779 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
CLIC1-206ENST00000375779 TMOD3Q9NYL9 352 aa20.01■□□□□ 0.79
CLIC1-206ENST00000375779 ZNF831Q5JPB2 1677 aa20■□□□□ 0.79
CLIC1-206ENST00000375779 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
CLIC1-206ENST00000375779 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms