RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
SDHD-201ENST00000375549 RAPGEF4Q8WZA2 1011 aa16.16■□□□□ 0.18
SDHD-201ENST00000375549 USP35Q9P2H5 1018 aa16.16■□□□□ 0.18
SDHD-201ENST00000375549 CRB1P82279 1406 aa16.16■□□□□ 0.18
SDHD-201ENST00000375549 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
SDHD-201ENST00000375549 PLCH1Q4KWH8 1693 aa16.15■□□□□ 0.18
SDHD-201ENST00000375549 FAM208AQ9UK61 1670 aaKnown RBP16.15■□□□□ 0.18
SDHD-201ENST00000375549 SLIT2O94813 1529 aa16.14■□□□□ 0.17
SDHD-201ENST00000375549 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
SDHD-201ENST00000375549 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
SDHD-201ENST00000375549 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
SDHD-201ENST00000375549 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
SDHD-201ENST00000375549 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
SDHD-201ENST00000375549 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
SDHD-201ENST00000375549 USP21Q9UK80 565 aa16.12■□□□□ 0.17
SDHD-201ENST00000375549 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
SDHD-201ENST00000375549 CCDC27Q2M243 656 aa16.11■□□□□ 0.17
SDHD-201ENST00000375549 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
SDHD-201ENST00000375549 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
SDHD-201ENST00000375549 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
SDHD-201ENST00000375549 MEGF6O75095 1541 aa16.11■□□□□ 0.17
SDHD-201ENST00000375549 IL2RBP14784 551 aa16.11■□□□□ 0.17
SDHD-201ENST00000375549 AFF2P51816 1311 aa16.1■□□□□ 0.17
SDHD-201ENST00000375549 ZNF521Q96K83 1311 aa16.1■□□□□ 0.17
SDHD-201ENST00000375549 NRAPQ86VF7 1730 aa16.1■□□□□ 0.17
SDHD-201ENST00000375549 NWD2Q9ULI1 1742 aa16.1■□□□□ 0.17
SDHD-201ENST00000375549 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
SDHD-201ENST00000375549 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
SDHD-201ENST00000375549 SPG7Q9UQ90 795 aa16.1■□□□□ 0.17
SDHD-201ENST00000375549 BCL9LQ86UU0 1499 aa16.09■□□□□ 0.17
SDHD-201ENST00000375549 GOLGA2Q08379 1002 aa16.09■□□□□ 0.17
SDHD-201ENST00000375549 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.17
SDHD-201ENST00000375549 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.17
SDHD-201ENST00000375549 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.17
SDHD-201ENST00000375549 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.16
SDHD-201ENST00000375549 PDE3BQ13370 1112 aa16.08■□□□□ 0.16
SDHD-201ENST00000375549 DCTN1Q14203 1278 aa16.08■□□□□ 0.16
SDHD-201ENST00000375549 VPS72Q15906 364 aa16.08■□□□□ 0.16
SDHD-201ENST00000375549 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.16
SDHD-201ENST00000375549 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
SDHD-201ENST00000375549 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
SDHD-201ENST00000375549 MCM10Q7L590 875 aa16.07■□□□□ 0.16
SDHD-201ENST00000375549 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
SDHD-201ENST00000375549 THUMPD2Q9BTF0 503 aaKnown RBP16.07■□□□□ 0.16
SDHD-201ENST00000375549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.16
SDHD-201ENST00000375549 THRAP3Q9Y2W1 955 aaKnown RBP16.07■□□□□ 0.16
SDHD-201ENST00000375549 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
SDHD-201ENST00000375549 MAP3K5Q99683 1374 aa16.06■□□□□ 0.16
SDHD-201ENST00000375549 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
SDHD-201ENST00000375549 ZCRB1Q8TBF4 217 aaKnown RBP16.06■□□□□ 0.16
SDHD-201ENST00000375549 PLEKHG2Q9H7P9 1386 aa16.05■□□□□ 0.16
SDHD-201ENST00000375549 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
SDHD-201ENST00000375549 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
SDHD-201ENST00000375549 E9PSI1 815 aa16.03■□□□□ 0.16
SDHD-201ENST00000375549 CALD1Q05682 793 aaKnown RBP16.03■□□□□ 0.16
SDHD-201ENST00000375549 SLFN5Q08AF3 891 aa16.03■□□□□ 0.16
SDHD-201ENST00000375549 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
SDHD-201ENST00000375549 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
SDHD-201ENST00000375549 CYP27B1O15528 508 aa16.02■□□□□ 0.16
SDHD-201ENST00000375549 PHKG2P15735 406 aa16.02■□□□□ 0.16
SDHD-201ENST00000375549 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.16
SDHD-201ENST00000375549 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
SDHD-201ENST00000375549 BARGINQ6ZT62 677 aa16.02■□□□□ 0.16
SDHD-201ENST00000375549 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
SDHD-201ENST00000375549 CDCA7Q9BWT1 371 aaPredicted RBP16.02■□□□□ 0.16
SDHD-201ENST00000375549 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
SDHD-201ENST00000375549 PARP4Q9UKK3 1724 aaKnown RBP16.02■□□□□ 0.16
SDHD-201ENST00000375549 PCDH11XQ9BZA7 1347 aa16.02■□□□□ 0.16
SDHD-201ENST00000375549 PCDH11YQ9BZA8 1340 aa16.02■□□□□ 0.16
SDHD-201ENST00000375549 EXOC5O00471 708 aa16.02■□□□□ 0.15
SDHD-201ENST00000375549 IL17REQ8NFR9 667 aa16.02■□□□□ 0.15
SDHD-201ENST00000375549 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.15
SDHD-201ENST00000375549 LGR6Q9HBX8 967 aa16.02■□□□□ 0.15
SDHD-201ENST00000375549 IL16Q14005 1332 aa16.01■□□□□ 0.15
SDHD-201ENST00000375549 GJD4Q96KN9 370 aaPredicted RBP16.01■□□□□ 0.15
SDHD-201ENST00000375549 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
SDHD-201ENST00000375549 TNKS1BP1Q9C0C2 1729 aaKnown RBP16■□□□□ 0.15
SDHD-201ENST00000375549 ATRNO75882 1429 aa16■□□□□ 0.15
SDHD-201ENST00000375549 DLG5Q8TDM6 1919 aa16■□□□□ 0.15
SDHD-201ENST00000375549 A0A0G2JS52 829 aa16■□□□□ 0.15
SDHD-201ENST00000375549 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
SDHD-201ENST00000375549 MYT1Q01538 1121 aa16■□□□□ 0.15
SDHD-201ENST00000375549 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
SDHD-201ENST00000375549 HSP90AB1P08238 724 aaKnown RBP15.99■□□□□ 0.15
SDHD-201ENST00000375549 DDB1Q16531 1140 aa15.99■□□□□ 0.15
SDHD-201ENST00000375549 DUSP27Q5VZP5 1158 aa15.99■□□□□ 0.15
SDHD-201ENST00000375549 GNAI1P63096 354 aa15.98■□□□□ 0.15
SDHD-201ENST00000375549 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
SDHD-201ENST00000375549 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
SDHD-201ENST00000375549 TSR2Q969E8 191 aaKnown RBP15.98■□□□□ 0.15
SDHD-201ENST00000375549 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
SDHD-201ENST00000375549 TEFQ10587 303 aa15.97■□□□□ 0.15
SDHD-201ENST00000375549 DCAF5Q96JK2 942 aa15.97■□□□□ 0.15
SDHD-201ENST00000375549 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
SDHD-201ENST00000375549 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
SDHD-201ENST00000375549 TNS2Q63HR2 1409 aa15.96■□□□□ 0.15
SDHD-201ENST00000375549 CEMIPQ8WUJ3 1361 aa15.96■□□□□ 0.15
SDHD-201ENST00000375549 FANCIQ9NVI1 1328 aa15.96■□□□□ 0.15
SDHD-201ENST00000375549 ZNF853P0CG23 659 aa15.96■□□□□ 0.15
SDHD-201ENST00000375549 KDM6AO15550 1401 aaPredicted RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms