RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PROM2Q8N271 834 aa21.5■■□□□ 1.03
SDHB-201ENST00000375499 SMG6Q86US8 1419 aaKnown RBP21.49■■□□□ 1.03
SDHB-201ENST00000375499 STK32BQ9NY57 414 aa21.49■■□□□ 1.03
SDHB-201ENST00000375499 ANO8Q9HCE9 1232 aaPredicted RBP21.48■■□□□ 1.03
SDHB-201ENST00000375499 CASZ1Q86V15 1759 aa21.47■■□□□ 1.03
SDHB-201ENST00000375499 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
SDHB-201ENST00000375499 ACSBG1Q96GR2 724 aa21.47■■□□□ 1.03
SDHB-201ENST00000375499 POLKQ9UBT6 870 aa21.47■■□□□ 1.03
SDHB-201ENST00000375499 BTAF1O14981 1849 aa21.47■■□□□ 1.03
SDHB-201ENST00000375499 KAT6BQ8WYB5 2073 aa21.46■■□□□ 1.03
SDHB-201ENST00000375499 PPM1GO15355 546 aaPredicted RBP21.46■■□□□ 1.03
SDHB-201ENST00000375499 PTGER2P43116 358 aa21.46■■□□□ 1.03
SDHB-201ENST00000375499 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
SDHB-201ENST00000375499 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
SDHB-201ENST00000375499 DOT1LQ8TEK3 1739 aa21.46■■□□□ 1.03
SDHB-201ENST00000375499 NCAPD2Q15021 1401 aa21.46■■□□□ 1.03
SDHB-201ENST00000375499 MTFR1LQ9H019 292 aa21.45■■□□□ 1.02
SDHB-201ENST00000375499 NSD2O96028 1365 aa21.45■■□□□ 1.02
SDHB-201ENST00000375499 ZBTB7AO95365 584 aa21.44■■□□□ 1.02
SDHB-201ENST00000375499 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
SDHB-201ENST00000375499 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
SDHB-201ENST00000375499 ZNF784Q8NCA9 323 aaPredicted RBP21.43■■□□□ 1.02
SDHB-201ENST00000375499 DDX54Q8TDD1 881 aaKnown RBP21.43■■□□□ 1.02
SDHB-201ENST00000375499 PKD1L3Q7Z443 1732 aa21.42■■□□□ 1.02
SDHB-201ENST00000375499 ATF5Q9Y2D1 282 aaPredicted RBP21.42■■□□□ 1.02
SDHB-201ENST00000375499 AMER1Q5JTC6 1135 aaPredicted RBP21.41■■□□□ 1.02
SDHB-201ENST00000375499 PDGFDQ9GZP0 370 aaPredicted RBP21.41■■□□□ 1.02
SDHB-201ENST00000375499 ZCRB1Q8TBF4 217 aaKnown RBP21.4■■□□□ 1.02
SDHB-201ENST00000375499 CHD4Q14839 1912 aa21.39■■□□□ 1.02
SDHB-201ENST00000375499 FHDC1Q9C0D6 1143 aaPredicted RBP21.39■■□□□ 1.01
SDHB-201ENST00000375499 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.01
SDHB-201ENST00000375499 PER1O15534 1290 aaPredicted RBP21.38■■□□□ 1.01
SDHB-201ENST00000375499 EIF4A2Q14240 407 aaKnown RBP21.38■■□□□ 1.01
SDHB-201ENST00000375499 EYA1Q99502 592 aa21.38■■□□□ 1.01
SDHB-201ENST00000375499 SGIP1Q9BQI5 828 aa21.38■■□□□ 1.01
SDHB-201ENST00000375499 TOGARAM1Q9Y4F4 1720 aa21.38■■□□□ 1.01
SDHB-201ENST00000375499 MORC1Q86VD1 984 aa21.37■■□□□ 1.01
SDHB-201ENST00000375499 RAPGEF4Q8WZA2 1011 aa21.37■■□□□ 1.01
SDHB-201ENST00000375499 TATP17735 454 aaPredicted RBP21.36■■□□□ 1.01
SDHB-201ENST00000375499 PAPPAQ13219 1627 aa21.36■■□□□ 1.01
SDHB-201ENST00000375499 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
SDHB-201ENST00000375499 ARXQ96QS3 562 aa21.35■■□□□ 1.01
SDHB-201ENST00000375499 CYP27B1O15528 508 aa21.33■■□□□ 1.01
SDHB-201ENST00000375499 PRIM1P49642 420 aaKnown RBP21.32■■□□□ 1
SDHB-201ENST00000375499 SLC16A10Q8TF71 515 aa21.32■■□□□ 1
SDHB-201ENST00000375499 LY75O60449 1722 aa21.32■■□□□ 1
SDHB-201ENST00000375499 PCDH11XQ9BZA7 1347 aa21.31■■□□□ 1
SDHB-201ENST00000375499 PCDH11YQ9BZA8 1340 aa21.31■■□□□ 1
SDHB-201ENST00000375499 C1QTNF8P60827 252 aa21.31■■□□□ 1
SDHB-201ENST00000375499 IGSF1Q8N6C5 1336 aa21.3■■□□□ 1
SDHB-201ENST00000375499 ITGB4P16144 1822 aa21.3■■□□□ 1
SDHB-201ENST00000375499 CC2D1BQ5T0F9 858 aaKnown RBP21.3■■□□□ 1
SDHB-201ENST00000375499 SYTL4Q96C24 671 aaPredicted RBP21.3■■□□□ 1
SDHB-201ENST00000375499 LRRC4BQ9NT99 713 aa21.29■■□□□ 1
SDHB-201ENST00000375499 SENP3-EIF4A1A0A087X0R7 540 aa21.26■□□□□ 0.99
SDHB-201ENST00000375499 SLC27A3Q5K4L6 730 aa21.26■□□□□ 0.99
SDHB-201ENST00000375499 AEBP1Q8IUX7 1158 aa21.26■□□□□ 0.99
SDHB-201ENST00000375499 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
SDHB-201ENST00000375499 TUBGCP6Q96RT7 1819 aa21.25■□□□□ 0.99
SDHB-201ENST00000375499 KCNQ4P56696 695 aa21.25■□□□□ 0.99
SDHB-201ENST00000375499 CNGB1Q14028 1251 aaPredicted RBP21.25■□□□□ 0.99
SDHB-201ENST00000375499 GPR162Q16538 588 aa21.25■□□□□ 0.99
SDHB-201ENST00000375499 POLD1P28340 1107 aa21.24■□□□□ 0.99
SDHB-201ENST00000375499 ZNF827Q17R98 1081 aa21.24■□□□□ 0.99
SDHB-201ENST00000375499 IL13P35225 146 aa21.23■□□□□ 0.99
SDHB-201ENST00000375499 MTHFSP49914 203 aa21.23■□□□□ 0.99
SDHB-201ENST00000375499 UTRNP46939 3433 aa21.22■□□□□ 0.99
SDHB-201ENST00000375499 COL3A1P02461 1466 aaPredicted RBP21.22■□□□□ 0.99
SDHB-201ENST00000375499 SPG7Q9UQ90 795 aa21.22■□□□□ 0.99
SDHB-201ENST00000375499 HMGB2P26583 209 aaKnown RBP21.21■□□□□ 0.99
SDHB-201ENST00000375499 NKX1-1Q15270 411 aaPredicted RBP21.21■□□□□ 0.99
SDHB-201ENST00000375499 AKT1S1Q96B36 256 aa21.21■□□□□ 0.99
SDHB-201ENST00000375499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.21■□□□□ 0.99
SDHB-201ENST00000375499 PHKG2P15735 406 aa21.2■□□□□ 0.98
SDHB-201ENST00000375499 KDRP35968 1356 aa21.2■□□□□ 0.98
SDHB-201ENST00000375499 PLEKHG2Q9H7P9 1386 aa21.2■□□□□ 0.98
SDHB-201ENST00000375499 QSER1Q2KHR3 1735 aa21.19■□□□□ 0.98
SDHB-201ENST00000375499 TAF1LQ8IZX4 1826 aa21.18■□□□□ 0.98
SDHB-201ENST00000375499 MPRIPQ6WCQ1 1025 aa21.18■□□□□ 0.98
SDHB-201ENST00000375499 C5P01031 1676 aa21.18■□□□□ 0.98
SDHB-201ENST00000375499 GIGYF1O75420 1035 aaPredicted RBP21.17■□□□□ 0.98
SDHB-201ENST00000375499 SULT6B1Q6IMI4 303 aa21.17■□□□□ 0.98
SDHB-201ENST00000375499 PALLDQ8WX93 1383 aa21.17■□□□□ 0.98
SDHB-201ENST00000375499 KDM6AO15550 1401 aaPredicted RBP21.17■□□□□ 0.98
SDHB-201ENST00000375499 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
SDHB-201ENST00000375499 IFNL2Q8IZJ0 200 aa21.16■□□□□ 0.98
SDHB-201ENST00000375499 PIGBQ92521 554 aa21.16■□□□□ 0.98
SDHB-201ENST00000375499 TFCP2L1Q9NZI6 479 aa21.15■□□□□ 0.98
SDHB-201ENST00000375499 CCNL1Q9UK58 526 aaPredicted RBP21.15■□□□□ 0.98
SDHB-201ENST00000375499 COL24A1Q17RW2 1714 aa21.14■□□□□ 0.97
SDHB-201ENST00000375499 ZNF530Q6P9A1 599 aaPredicted RBP21.13■□□□□ 0.97
SDHB-201ENST00000375499 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
SDHB-201ENST00000375499 HMOX1P09601 288 aa21.12■□□□□ 0.97
SDHB-201ENST00000375499 PLEKHO1Q53GL0 409 aaPredicted RBP21.12■□□□□ 0.97
SDHB-201ENST00000375499 VIRMAQ69YN4 1812 aaKnown RBP21.11■□□□□ 0.97
SDHB-201ENST00000375499 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
SDHB-201ENST00000375499 DIAPH1O60610 1272 aaKnown RBP21.1■□□□□ 0.97
SDHB-201ENST00000375499 IFFO2Q5TF58 517 aa21.1■□□□□ 0.97
SDHB-201ENST00000375499 TMOD3Q9NYL9 352 aa21.1■□□□□ 0.97
SDHB-201ENST00000375499 C4BP0C0L5 1744 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms