RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 CNGA1P29973 690 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 MAP2K2P36507 400 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 FSD2A1L4K1 749 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 POTEDQ86YR6 584 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC114Q96M63 670 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 RAB3IPQ96QF0 476 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 BCL11BQ9C0K0 894 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CTAGE15A4D2H0 777 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 KIF1CO43896 1103 aaKnown RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 B4GALNT3Q6L9W6 998 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 KIF7Q2M1P5 1343 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 UBXN4Q92575 508 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CTDP1Q9Y5B0 961 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 PALM2Q8IXS6 379 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 ANKRD24Q8TF21 1146 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CBFA2T2O43439 604 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 APBB1IPQ7Z5R6 666 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC68Q9H2F9 335 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CDCA8Q53HL2 280 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 COMMD10Q9Y6G5 202 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 NLRP5P59047 1200 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TNIP1Q15025 636 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 SPATS2Q86XZ4 545 aaKnown RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TSNARE1Q96NA8 513 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 EFCC1Q9HA90 598 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 VCX3AQ9NNX9 186 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 SSBP05455 408 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 BASP1P80723 227 aaKnown RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC170Q8IYT3 715 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 EHBP1Q8NDI1 1231 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 MXRA7P84157 204 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC178Q5BJE1 867 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 UTP14CQ5TAP6 766 aaKnown RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TMEM57Q8N5G2 664 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TRIM8Q9BZR9 551 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TTC19Q6DKK2 380 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TRIM5Q9C035 493 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 ZMYND15Q9H091 742 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TOMM22Q9NS69 142 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 SSX2IPQ9Y2D8 614 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 HIP1RO75146 1068 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 AMOTL1Q8IY63 956 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC89Q8N998 374 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 SELENOSQ9BQE4 189 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 TSPY26PQ9H489 355 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CAPN9O14815 690 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 ZFXP17010 805 aaPredicted RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PDCLQ13371 301 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 GSTTP1A0A1W2PQM5 241 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 TCERG1LQ5VWI1 586 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PLPPR3Q6T4P5 718 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 SPDL1Q96EA4 605 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 E9PMD0 336 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CHGAP10645 457 aaKnown RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 MAN1A2O60476 641 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 KIF4AO95239 1232 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PSMA4P25789 261 aaKnown RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 GFM2Q969S9 779 aaKnown RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 THEGQ9P2T0 379 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC69A6NI79 296 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PPP1R14CQ8TAE6 165 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 USO1O60763 962 aaKnown RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 G3V3G9 751 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 IMMTQ16891 758 aaKnown RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DCAF8Q5TAQ9 597 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 HYPKQ9NX55 129 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ATAD2Q6PL18 1390 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 A0A1B0GW55 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L2P0CJ85 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L3P0CJ86 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L4P0CJ87 422 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L5P0CJ88 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L6P0CJ89 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L7P0CJ90 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ZNF280CQ8ND82 737 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 SCLT1Q96NL6 688 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4Q9UBX2 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 CLIP2Q9UDT6 1046 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 PRC1O43663 620 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ATP11AP98196 1134 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 HVCN1Q96D96 273 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ZHX1Q9UKY1 873 aaPredicted RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 TRDNQ13061 729 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 LONP1P36776 959 aaKnown RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 PCYT1AP49585 367 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 SAFBQ15424 915 aaKnown RBP eCLIP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 TSNAXIP1Q2TAA8 658 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC38Q502W7 563 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 TMCO4Q5TGY1 634 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 PPFIBP1Q86W92 1011 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 JAKMIP1Q96N16 626 aaKnown RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 NOL10Q9BSC4 688 aaKnown RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 PCK1P35558 622 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 EIF5P55010 431 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms