RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 CNGA1P29973 690 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 MAP2K2P36507 400 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 FSD2A1L4K1 749 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 POTEDQ86YR6 584 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC114Q96M63 670 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 RAB3IPQ96QF0 476 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 BCL11BQ9C0K0 894 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CTAGE15A4D2H0 777 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 KIF1CO43896 1103 aaKnown RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 B4GALNT3Q6L9W6 998 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 KIF7Q2M1P5 1343 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 UBXN4Q92575 508 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CTDP1Q9Y5B0 961 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 PALM2Q8IXS6 379 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 ANKRD24Q8TF21 1146 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 CBFA2T2O43439 604 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 APBB1IPQ7Z5R6 666 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC68Q9H2F9 335 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CDCA8Q53HL2 280 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 COMMD10Q9Y6G5 202 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 NLRP5P59047 1200 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TNIP1Q15025 636 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 SPATS2Q86XZ4 545 aaKnown RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TSNARE1Q96NA8 513 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 EFCC1Q9HA90 598 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 VCX3AQ9NNX9 186 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 SSBP05455 408 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 BASP1P80723 227 aaKnown RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC170Q8IYT3 715 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 EHBP1Q8NDI1 1231 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 MXRA7P84157 204 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC178Q5BJE1 867 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 UTP14CQ5TAP6 766 aaKnown RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TMEM57Q8N5G2 664 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TRIM8Q9BZR9 551 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TTC19Q6DKK2 380 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TRIM5Q9C035 493 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 ZMYND15Q9H091 742 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 TOMM22Q9NS69 142 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 SSX2IPQ9Y2D8 614 aa6.93□□□□□ -1.3
SCN2A-202ENST00000375427 HIP1RO75146 1068 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 AMOTL1Q8IY63 956 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC89Q8N998 374 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 SELENOSQ9BQE4 189 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 TSPY26PQ9H489 355 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CAPN9O14815 690 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 ZFXP17010 805 aaPredicted RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PDCLQ13371 301 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 GSTTP1A0A1W2PQM5 241 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 TCERG1LQ5VWI1 586 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PLPPR3Q6T4P5 718 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 SPDL1Q96EA4 605 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 E9PMD0 336 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CHGAP10645 457 aaKnown RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 MAN1A2O60476 641 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 KIF4AO95239 1232 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PSMA4P25789 261 aaKnown RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 GFM2Q969S9 779 aaKnown RBP6.92□□□□□ -1.3
SCN2A-202ENST00000375427 THEGQ9P2T0 379 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC69A6NI79 296 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 PPP1R14CQ8TAE6 165 aa6.92□□□□□ -1.3
SCN2A-202ENST00000375427 USO1O60763 962 aaKnown RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 G3V3G9 751 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 IMMTQ16891 758 aaKnown RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DCAF8Q5TAQ9 597 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 HYPKQ9NX55 129 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ATAD2Q6PL18 1390 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 A0A1B0GW55 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L2P0CJ85 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L3P0CJ86 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L4P0CJ87 422 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L5P0CJ88 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L6P0CJ89 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4L7P0CJ90 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ZNF280CQ8ND82 737 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 SCLT1Q96NL6 688 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 DUX4Q9UBX2 424 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 CLIP2Q9UDT6 1046 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 PRC1O43663 620 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ATP11AP98196 1134 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 HVCN1Q96D96 273 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 ZHX1Q9UKY1 873 aaPredicted RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 TRDNQ13061 729 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 LONP1P36776 959 aaKnown RBP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 PCYT1AP49585 367 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 SAFBQ15424 915 aaKnown RBP eCLIP6.91□□□□□ -1.3
SCN2A-202ENST00000375427 TSNAXIP1Q2TAA8 658 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC38Q502W7 563 aa6.91□□□□□ -1.3
SCN2A-202ENST00000375427 TMCO4Q5TGY1 634 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 PPFIBP1Q86W92 1011 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 JAKMIP1Q96N16 626 aaKnown RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 NOL10Q9BSC4 688 aaKnown RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 PCK1P35558 622 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 EIF5P55010 431 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms