RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
COL15A1-201ENST00000375001 GNAI2P04899 355 aa23.24■■□□□ 1.31
COL15A1-201ENST00000375001 CCDC30Q5VVM6 783 aa23.24■■□□□ 1.31
COL15A1-201ENST00000375001 JAKMIP3Q5VZ66 844 aa23.24■■□□□ 1.31
COL15A1-201ENST00000375001 DDX11Q96FC9 970 aa23.24■■□□□ 1.31
COL15A1-201ENST00000375001 C16orf45Q96MC5 204 aaPredicted RBP23.24■■□□□ 1.31
COL15A1-201ENST00000375001 TAF4BQ92750 862 aa23.24■■□□□ 1.31
COL15A1-201ENST00000375001 MAP4K4O95819 1239 aaPredicted RBP23.23■■□□□ 1.31
COL15A1-201ENST00000375001 CCDC113Q9H0I3 377 aa23.23■■□□□ 1.31
COL15A1-201ENST00000375001 SLC26A8Q96RN1 970 aa23.23■■□□□ 1.31
COL15A1-201ENST00000375001 ZHX3Q9H4I2 956 aa23.23■■□□□ 1.31
COL15A1-201ENST00000375001 TBC1D2BQ9UPU7 963 aa23.23■■□□□ 1.31
COL15A1-201ENST00000375001 PSME1Q06323 249 aa23.22■■□□□ 1.31
COL15A1-201ENST00000375001 ZSCAN12O43309 604 aa23.22■■□□□ 1.31
COL15A1-201ENST00000375001 GBP2P32456 591 aaPredicted RBP23.22■■□□□ 1.31
COL15A1-201ENST00000375001 ZFP91Q96JP5 570 aaPredicted RBP23.22■■□□□ 1.31
COL15A1-201ENST00000375001 ARHGAP5Q13017 1502 aa23.22■■□□□ 1.31
COL15A1-201ENST00000375001 MAP9Q49MG5 647 aa23.22■■□□□ 1.31
COL15A1-201ENST00000375001 CASQ1P31415 396 aa23.22■■□□□ 1.31
COL15A1-201ENST00000375001 KIF4BQ2VIQ3 1234 aa23.21■■□□□ 1.31
COL15A1-201ENST00000375001 TIGD1Q96MW7 591 aa23.21■■□□□ 1.31
COL15A1-201ENST00000375001 FAM107BQ9H098 131 aa23.21■■□□□ 1.31
COL15A1-201ENST00000375001 IKQ13123 557 aaPredicted RBP23.21■■□□□ 1.31
COL15A1-201ENST00000375001 SEPT11Q9NVA2 429 aaKnown RBP23.21■■□□□ 1.31
COL15A1-201ENST00000375001 TRMT1Q9NXH9 659 aaKnown RBP23.21■■□□□ 1.31
COL15A1-201ENST00000375001 EIF5P55010 431 aaKnown RBP23.21■■□□□ 1.31
COL15A1-201ENST00000375001 EFCAB5A4FU69 1503 aa23.21■■□□□ 1.31
COL15A1-201ENST00000375001 PAF1Q8N7H5 531 aa23.21■■□□□ 1.31
COL15A1-201ENST00000375001 PDRG1Q9NUG6 133 aa23.21■■□□□ 1.31
COL15A1-201ENST00000375001 USP25Q9UHP3 1055 aa23.2■■□□□ 1.31
COL15A1-201ENST00000375001 DAPK1P53355 1430 aa23.2■■□□□ 1.31
COL15A1-201ENST00000375001 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
COL15A1-201ENST00000375001 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
COL15A1-201ENST00000375001 LMAN1P49257 510 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 TRIM22Q8IYM9 498 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 TMEM57Q8N5G2 664 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 MNAT1P51948 309 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 MICALCLQ6ZW33 695 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 BLOC1S2Q6QNY1 142 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 PPP6R1Q9UPN7 881 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 NF2P35240 595 aa23.19■■□□□ 1.3
COL15A1-201ENST00000375001 NLRP6P59044 892 aa23.18■■□□□ 1.3
COL15A1-201ENST00000375001 KIF5CO60282 957 aa23.18■■□□□ 1.3
COL15A1-201ENST00000375001 SMARCC1Q92922 1105 aaPredicted RBP23.18■■□□□ 1.3
COL15A1-201ENST00000375001 JAKMIP1Q96N16 626 aaKnown RBP23.18■■□□□ 1.3
COL15A1-201ENST00000375001 CLIP2Q9UDT6 1046 aa23.18■■□□□ 1.3
COL15A1-201ENST00000375001 EVA1CP58658 441 aa23.18■■□□□ 1.3
COL15A1-201ENST00000375001 FERMT3Q86UX7 667 aa23.18■■□□□ 1.3
COL15A1-201ENST00000375001 DYNC1I1O14576 645 aa23.18■■□□□ 1.3
COL15A1-201ENST00000375001 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
COL15A1-201ENST00000375001 SYTL4Q96C24 671 aaPredicted RBP23.17■■□□□ 1.3
COL15A1-201ENST00000375001 GTF2A1P52655 376 aaPredicted RBP23.17■■□□□ 1.3
COL15A1-201ENST00000375001 ZSCAN31Q96LW9 406 aaPredicted RBP23.17■■□□□ 1.3
COL15A1-201ENST00000375001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.3
COL15A1-201ENST00000375001 SULT6B1Q6IMI4 303 aa23.16■■□□□ 1.3
COL15A1-201ENST00000375001 CCDC183Q5T5S1 534 aa23.16■■□□□ 1.3
COL15A1-201ENST00000375001 TMEM132AQ24JP5 1023 aa23.16■■□□□ 1.3
COL15A1-201ENST00000375001 TMX1Q9H3N1 280 aa23.16■■□□□ 1.3
COL15A1-201ENST00000375001 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
COL15A1-201ENST00000375001 GAS2L2Q8NHY3 880 aa23.15■■□□□ 1.3
COL15A1-201ENST00000375001 ERC1Q8IUD2 1116 aa23.15■■□□□ 1.3
COL15A1-201ENST00000375001 CABP1Q9NZU7 370 aa23.15■■□□□ 1.3
COL15A1-201ENST00000375001 RAI14Q9P0K7 980 aa23.15■■□□□ 1.3
COL15A1-201ENST00000375001 DNAAF4Q8WXU2 420 aa23.14■■□□□ 1.3
COL15A1-201ENST00000375001 BCCIPQ9P287 314 aaKnown RBP eCLIP23.14■■□□□ 1.3
COL15A1-201ENST00000375001 MCM3P25205 808 aa23.13■■□□□ 1.29
COL15A1-201ENST00000375001 RAPGEF4Q8WZA2 1011 aa23.13■■□□□ 1.29
COL15A1-201ENST00000375001 CCT4P50991 539 aaKnown RBP23.13■■□□□ 1.29
COL15A1-201ENST00000375001 IFFO1Q0D2I5 559 aa23.13■■□□□ 1.29
COL15A1-201ENST00000375001 TBC1D2Q9BYX2 928 aa23.12■■□□□ 1.29
COL15A1-201ENST00000375001 BMS1Q14692 1282 aaKnown RBP23.12■■□□□ 1.29
COL15A1-201ENST00000375001 IMMTQ16891 758 aaKnown RBP23.12■■□□□ 1.29
COL15A1-201ENST00000375001 CCDC91Q7Z6B0 441 aa23.12■■□□□ 1.29
COL15A1-201ENST00000375001 SSFA2P28290 1259 aa23.12■■□□□ 1.29
COL15A1-201ENST00000375001 RARSP54136 660 aaKnown RBP23.12■■□□□ 1.29
COL15A1-201ENST00000375001 NUP133Q8WUM0 1156 aa23.12■■□□□ 1.29
COL15A1-201ENST00000375001 TOP1P11387 765 aaKnown RBP23.11■■□□□ 1.29
COL15A1-201ENST00000375001 CWC27Q6UX04 472 aaKnown RBP23.11■■□□□ 1.29
COL15A1-201ENST00000375001 LUZP1Q86V48 1076 aa23.11■■□□□ 1.29
COL15A1-201ENST00000375001 ZNF428Q96B54 188 aa23.11■■□□□ 1.29
COL15A1-201ENST00000375001 NOL7Q9UMY1 257 aaKnown RBP23.11■■□□□ 1.29
COL15A1-201ENST00000375001 CCDC69A6NI79 296 aa23.11■■□□□ 1.29
COL15A1-201ENST00000375001 SPA17Q15506 151 aa23.11■■□□□ 1.29
COL15A1-201ENST00000375001 ANO10Q9NW15 660 aa23.11■■□□□ 1.29
COL15A1-201ENST00000375001 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
COL15A1-201ENST00000375001 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
COL15A1-201ENST00000375001 ANKRD30BQ9BXX2 1392 aa23.1■■□□□ 1.29
COL15A1-201ENST00000375001 TMPOP42166 694 aaKnown RBP23.1■■□□□ 1.29
COL15A1-201ENST00000375001 TNPO1Q92973 898 aaKnown RBP23.1■■□□□ 1.29
COL15A1-201ENST00000375001 SSBP05455 408 aaKnown RBP eCLIP23.1■■□□□ 1.29
COL15A1-201ENST00000375001 CCDC175P0C221 793 aa23.1■■□□□ 1.29
COL15A1-201ENST00000375001 SMC1AQ14683 1233 aaKnown RBP23.1■■□□□ 1.29
COL15A1-201ENST00000375001 MCM5P33992 734 aa23.09■■□□□ 1.29
COL15A1-201ENST00000375001 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
COL15A1-201ENST00000375001 CTR9Q6PD62 1173 aa23.09■■□□□ 1.29
COL15A1-201ENST00000375001 ZNF397Q8NF99 534 aaPredicted RBP23.09■■□□□ 1.29
COL15A1-201ENST00000375001 DNA2P51530 1060 aa23.09■■□□□ 1.29
COL15A1-201ENST00000375001 SLC3A2P08195 630 aaKnown RBP23.08■■□□□ 1.29
COL15A1-201ENST00000375001 SIL1Q9H173 461 aa23.08■■□□□ 1.29
COL15A1-201ENST00000375001 NLRP2Q9NX02 1062 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms