RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 WDR62O43379 1518 aa23.25■■□□□ 1.31
TGFBR1-201ENST00000374990 DHX8Q14562 1220 aaKnown RBP23.24■■□□□ 1.31
TGFBR1-201ENST00000374990 STK38Q15208 465 aa23.24■■□□□ 1.31
TGFBR1-201ENST00000374990 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
TGFBR1-201ENST00000374990 IL27Q8NEV9 243 aa23.24■■□□□ 1.31
TGFBR1-201ENST00000374990 PDRG1Q9NUG6 133 aa23.23■■□□□ 1.31
TGFBR1-201ENST00000374990 CWC27Q6UX04 472 aaKnown RBP23.23■■□□□ 1.31
TGFBR1-201ENST00000374990 JAKMIP1Q96N16 626 aaKnown RBP23.23■■□□□ 1.31
TGFBR1-201ENST00000374990 MIS18AQ9NYP9 233 aa23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 CTNNA3Q9UI47 895 aa23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 ESPNB1AK53 854 aa23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 IGHDP01880 384 aa23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 TBC1D32Q96NH3 1257 aa23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 TNNT3P45378 269 aaPredicted RBP23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 RBM33Q96EV2 1170 aaKnown RBP23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 CCDC57Q2TAC2 916 aa23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 ARGLU1Q9NWB6 273 aaPredicted RBP23.22■■□□□ 1.31
TGFBR1-201ENST00000374990 LARP1Q6PKG0 1096 aaKnown RBP23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 TOM1L2Q6ZVM7 507 aa23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 CNNM1Q9NRU3 951 aa23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 PIK3C2GO75747 1445 aa23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 TTC39AQ5SRH9 613 aa23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 ZSCAN25Q6NSZ9 544 aa23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 PRDM11Q9NQV5 511 aa23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 PCMTD1Q96MG8 357 aaPredicted RBP23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 RBM42Q9BTD8 480 aaKnown RBP23.21■■□□□ 1.31
TGFBR1-201ENST00000374990 FYB1O15117 783 aa23.2■■□□□ 1.31
TGFBR1-201ENST00000374990 KIAA0556O60303 1618 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 MYL6BP14649 208 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 VSIG10Q8N0Z9 540 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 MNS1Q8NEH6 495 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 CFAP45Q9UL16 551 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 AMOTL2Q9Y2J4 779 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 FBXW7Q969H0 707 aa23.2■■□□□ 1.3
TGFBR1-201ENST00000374990 TRIM34Q9BYJ4 488 aa23.19■■□□□ 1.3
TGFBR1-201ENST00000374990 TNMDQ9H2S6 317 aa23.19■■□□□ 1.3
TGFBR1-201ENST00000374990 NACAP1Q9BZK3 213 aa23.18■■□□□ 1.3
TGFBR1-201ENST00000374990 PHF8Q9UPP1 1060 aa23.18■■□□□ 1.3
TGFBR1-201ENST00000374990 MAP4K4O95819 1239 aaPredicted RBP23.18■■□□□ 1.3
TGFBR1-201ENST00000374990 FLIIQ13045 1269 aa23.18■■□□□ 1.3
TGFBR1-201ENST00000374990 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 A2MP01023 1474 aa23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 UHRF1BP1Q6BDS2 1440 aa23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 DBF4Q9UBU7 674 aaPredicted RBP23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 EIF2AK4Q9P2K8 1649 aaKnown RBP23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 MBIPQ9NS73 344 aa23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 GNL3LQ9NVN8 582 aaKnown RBP23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 PLEKHH1Q9ULM0 1364 aa23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 NUTM1Q86Y26 1132 aa23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 DNAAF4Q8WXU2 420 aa23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 UPF3BQ9BZI7 483 aaKnown RBP23.17■■□□□ 1.3
TGFBR1-201ENST00000374990 TRIM22Q8IYM9 498 aa23.16■■□□□ 1.3
TGFBR1-201ENST00000374990 STRN4Q9NRL3 753 aa23.16■■□□□ 1.3
TGFBR1-201ENST00000374990 PCDHB15Q9Y5E8 787 aa23.15■■□□□ 1.3
TGFBR1-201ENST00000374990 SMARCA5O60264 1052 aaPredicted RBP23.15■■□□□ 1.3
TGFBR1-201ENST00000374990 SH2B1Q9NRF2 756 aaPredicted RBP23.15■■□□□ 1.3
TGFBR1-201ENST00000374990 F6X3S4 739 aa23.15■■□□□ 1.3
TGFBR1-201ENST00000374990 SLC3A2P08195 630 aaKnown RBP23.15■■□□□ 1.3
TGFBR1-201ENST00000374990 CCP110O43303 1012 aa23.15■■□□□ 1.3
TGFBR1-201ENST00000374990 ME1P48163 572 aa23.15■■□□□ 1.3
TGFBR1-201ENST00000374990 TEX35Q5T0J7 233 aa23.14■■□□□ 1.3
TGFBR1-201ENST00000374990 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.3
TGFBR1-201ENST00000374990 PZPP20742 1482 aa23.14■■□□□ 1.3
TGFBR1-201ENST00000374990 STK3Q13188 491 aa23.14■■□□□ 1.3
TGFBR1-201ENST00000374990 SPATA32Q96LK8 384 aa23.14■■□□□ 1.3
TGFBR1-201ENST00000374990 TBC1D9Q6ZT07 1266 aa23.14■■□□□ 1.29
TGFBR1-201ENST00000374990 DDX54Q8TDD1 881 aaKnown RBP23.13■■□□□ 1.29
TGFBR1-201ENST00000374990 ZC3H6P61129 1189 aaKnown RBP23.13■■□□□ 1.29
TGFBR1-201ENST00000374990 CASTP20810 708 aaKnown RBP23.13■■□□□ 1.29
TGFBR1-201ENST00000374990 CDKL5O76039 1030 aa23.13■■□□□ 1.29
TGFBR1-201ENST00000374990 PIP4K2AP48426 406 aaPredicted RBP23.12■■□□□ 1.29
TGFBR1-201ENST00000374990 NUP62CLQ9H1M0 184 aa23.12■■□□□ 1.29
TGFBR1-201ENST00000374990 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
TGFBR1-201ENST00000374990 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
TGFBR1-201ENST00000374990 LRRFIP2Q9Y608 721 aaKnown RBP23.12■■□□□ 1.29
TGFBR1-201ENST00000374990 ZNF518AQ6AHZ1 1483 aa23.12■■□□□ 1.29
TGFBR1-201ENST00000374990 NUCB1Q02818 461 aa23.12■■□□□ 1.29
TGFBR1-201ENST00000374990 CEBPZQ03701 1054 aaKnown RBP23.11■■□□□ 1.29
TGFBR1-201ENST00000374990 ZSCAN30Q86W11 494 aa23.11■■□□□ 1.29
TGFBR1-201ENST00000374990 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
TGFBR1-201ENST00000374990 ATP2B1P20020 1258 aa23.11■■□□□ 1.29
TGFBR1-201ENST00000374990 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
TGFBR1-201ENST00000374990 FILIP1LQ4L180 1135 aa23.1■■□□□ 1.29
TGFBR1-201ENST00000374990 MPHOSPH8Q99549 860 aa23.1■■□□□ 1.29
TGFBR1-201ENST00000374990 SMC2O95347 1197 aa23.1■■□□□ 1.29
TGFBR1-201ENST00000374990 TXLNAP40222 546 aa23.1■■□□□ 1.29
TGFBR1-201ENST00000374990 RAD21O60216 631 aa23.1■■□□□ 1.29
TGFBR1-201ENST00000374990 TNPO1Q92973 898 aaKnown RBP23.1■■□□□ 1.29
TGFBR1-201ENST00000374990 FKBP4Q02790 459 aaKnown RBP eCLIP23.1■■□□□ 1.29
TGFBR1-201ENST00000374990 SCAND2PQ9GZW5 306 aaPredicted RBP23.09■■□□□ 1.29
TGFBR1-201ENST00000374990 DNMT1P26358 1616 aaKnown RBP23.09■■□□□ 1.29
TGFBR1-201ENST00000374990 ACEP12821 1306 aa23.09■■□□□ 1.29
TGFBR1-201ENST00000374990 RRP12Q5JTH9 1297 aaKnown RBP23.09■■□□□ 1.29
TGFBR1-201ENST00000374990 U3KPZ7 1027 aaPredicted RBP23.09■■□□□ 1.29
TGFBR1-201ENST00000374990 ZNF771Q7L3S4 317 aaPredicted RBP23.09■■□□□ 1.29
TGFBR1-201ENST00000374990 CEP57L1Q8IYX8 460 aa23.08■■□□□ 1.29
TGFBR1-201ENST00000374990 LIMCH1Q9UPQ0 1083 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms