RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
HLA-DQA1-202ENST00000374949 MAP3K5Q99683 1374 aa15.03■□□□□ -0
HLA-DQA1-202ENST00000374949 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
HLA-DQA1-202ENST00000374949 LY75O60449 1722 aa15.03■□□□□ -0
HLA-DQA1-202ENST00000374949 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
HLA-DQA1-202ENST00000374949 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
HLA-DQA1-202ENST00000374949 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
HLA-DQA1-202ENST00000374949 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
HLA-DQA1-202ENST00000374949 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
HLA-DQA1-202ENST00000374949 KCNQ4P56696 695 aa15□□□□□ -0.01
HLA-DQA1-202ENST00000374949 CDCA8Q53HL2 280 aa15□□□□□ -0.01
HLA-DQA1-202ENST00000374949 MEGF6O75095 1541 aa15□□□□□ -0.01
HLA-DQA1-202ENST00000374949 NSD2O96028 1365 aa14.99□□□□□ -0.01
HLA-DQA1-202ENST00000374949 PNPLA7Q6ZV29 1317 aa14.99□□□□□ -0.01
HLA-DQA1-202ENST00000374949 IP6K1Q92551 441 aa14.99□□□□□ -0.01
HLA-DQA1-202ENST00000374949 MAP3K19Q56UN5 1328 aa14.98□□□□□ -0.01
HLA-DQA1-202ENST00000374949 SLC27A3Q5K4L6 730 aa14.98□□□□□ -0.01
HLA-DQA1-202ENST00000374949 SYTL4Q96C24 671 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQA1-202ENST00000374949 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
HLA-DQA1-202ENST00000374949 FBLN1P23142 703 aa14.96□□□□□ -0.01
HLA-DQA1-202ENST00000374949 HOXC9P31274 260 aa14.96□□□□□ -0.01
HLA-DQA1-202ENST00000374949 PRIM1P49642 420 aaKnown RBP14.96□□□□□ -0.01
HLA-DQA1-202ENST00000374949 GPR162Q16538 588 aa14.96□□□□□ -0.01
HLA-DQA1-202ENST00000374949 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.01
HLA-DQA1-202ENST00000374949 MIER1Q8N108 512 aa14.96□□□□□ -0.01
HLA-DQA1-202ENST00000374949 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
HLA-DQA1-202ENST00000374949 POLD1P28340 1107 aa14.95□□□□□ -0.02
HLA-DQA1-202ENST00000374949 COG3Q96JB2 828 aa14.95□□□□□ -0.02
HLA-DQA1-202ENST00000374949 TFCP2L1Q9NZI6 479 aa14.95□□□□□ -0.02
HLA-DQA1-202ENST00000374949 C5P01031 1676 aa14.95□□□□□ -0.02
HLA-DQA1-202ENST00000374949 AMPHP49418 695 aa14.94□□□□□ -0.02
HLA-DQA1-202ENST00000374949 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
HLA-DQA1-202ENST00000374949 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
HLA-DQA1-202ENST00000374949 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
HLA-DQA1-202ENST00000374949 KIF20BQ96Q89 1820 aa14.94□□□□□ -0.02
HLA-DQA1-202ENST00000374949 PUS7Q96PZ0 661 aaKnown RBP14.93□□□□□ -0.02
HLA-DQA1-202ENST00000374949 CCNL1Q9UK58 526 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQA1-202ENST00000374949 ANP32CO43423 234 aa14.92□□□□□ -0.02
HLA-DQA1-202ENST00000374949 C1QTNF8P60827 252 aa14.92□□□□□ -0.02
HLA-DQA1-202ENST00000374949 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
HLA-DQA1-202ENST00000374949 ZCRB1Q8TBF4 217 aaKnown RBP14.92□□□□□ -0.02
HLA-DQA1-202ENST00000374949 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
HLA-DQA1-202ENST00000374949 GOLGB1Q14789 3259 aaKnown RBP14.91□□□□□ -0.02
HLA-DQA1-202ENST00000374949 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
HLA-DQA1-202ENST00000374949 TAF1LQ8IZX4 1826 aa14.91□□□□□ -0.02
HLA-DQA1-202ENST00000374949 MSH5O43196 834 aa14.9□□□□□ -0.02
HLA-DQA1-202ENST00000374949 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
HLA-DQA1-202ENST00000374949 NBPF6Q5VWK0 638 aa14.89□□□□□ -0.03
HLA-DQA1-202ENST00000374949 MSL1Q68DK7 614 aa14.89□□□□□ -0.03
HLA-DQA1-202ENST00000374949 NBPF4Q96M43 638 aa14.89□□□□□ -0.03
HLA-DQA1-202ENST00000374949 GIGYF1O75420 1035 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQA1-202ENST00000374949 YBX3P16989 372 aaKnown RBP eCLIP14.88□□□□□ -0.03
HLA-DQA1-202ENST00000374949 COL23A1Q86Y22 540 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQA1-202ENST00000374949 GGNBP2Q9H3C7 697 aa14.88□□□□□ -0.03
HLA-DQA1-202ENST00000374949 ITGB4P16144 1822 aa14.87□□□□□ -0.03
HLA-DQA1-202ENST00000374949 PKD1L3Q7Z443 1732 aa14.87□□□□□ -0.03
HLA-DQA1-202ENST00000374949 RAPGEF4Q8WZA2 1011 aa14.86□□□□□ -0.03
HLA-DQA1-202ENST00000374949 PANK3Q9H999 370 aa14.86□□□□□ -0.03
HLA-DQA1-202ENST00000374949 C4BP0C0L5 1744 aa14.86□□□□□ -0.03
HLA-DQA1-202ENST00000374949 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
HLA-DQA1-202ENST00000374949 FYB1O15117 783 aa14.85□□□□□ -0.03
HLA-DQA1-202ENST00000374949 CGNL1Q0VF96 1302 aa14.85□□□□□ -0.03
HLA-DQA1-202ENST00000374949 PCDH11XQ9BZA7 1347 aa14.85□□□□□ -0.03
HLA-DQA1-202ENST00000374949 PCDH11YQ9BZA8 1340 aa14.85□□□□□ -0.03
HLA-DQA1-202ENST00000374949 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
HLA-DQA1-202ENST00000374949 UBR3Q6ZT12 1888 aa14.84□□□□□ -0.03
HLA-DQA1-202ENST00000374949 INSRP06213 1382 aa14.84□□□□□ -0.03
HLA-DQA1-202ENST00000374949 FLT4P35916 1363 aa14.84□□□□□ -0.03
HLA-DQA1-202ENST00000374949 ANKRD26Q9UPS8 1709 aa14.83□□□□□ -0.03
HLA-DQA1-202ENST00000374949 HSP90AB2PQ58FF8 381 aa14.83□□□□□ -0.04
HLA-DQA1-202ENST00000374949 ATP10DQ9P241 1426 aa14.83□□□□□ -0.04
HLA-DQA1-202ENST00000374949 PER1O15534 1290 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQA1-202ENST00000374949 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
HLA-DQA1-202ENST00000374949 GRIN3BO60391 1043 aa14.81□□□□□ -0.04
HLA-DQA1-202ENST00000374949 MAP2P11137 1827 aaKnown RBP14.8□□□□□ -0.04
HLA-DQA1-202ENST00000374949 CCER2I3L3R5 266 aa14.8□□□□□ -0.04
HLA-DQA1-202ENST00000374949 CYP27B1O15528 508 aa14.8□□□□□ -0.04
HLA-DQA1-202ENST00000374949 AMIGO3Q86WK7 504 aa14.8□□□□□ -0.04
HLA-DQA1-202ENST00000374949 PRKRIP1Q9H875 184 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQA1-202ENST00000374949 KNSTRNQ9Y448 316 aa14.8□□□□□ -0.04
HLA-DQA1-202ENST00000374949 PHF14O94880 888 aa14.79□□□□□ -0.04
HLA-DQA1-202ENST00000374949 KIF24Q5T7B8 1368 aa14.79□□□□□ -0.04
HLA-DQA1-202ENST00000374949 NSD3Q9BZ95 1437 aa14.79□□□□□ -0.04
HLA-DQA1-202ENST00000374949 EMILIN1Q9Y6C2 1016 aa14.79□□□□□ -0.04
HLA-DQA1-202ENST00000374949 NCAPD2Q15021 1401 aa14.78□□□□□ -0.04
HLA-DQA1-202ENST00000374949 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
HLA-DQA1-202ENST00000374949 AK7Q96M32 723 aa14.78□□□□□ -0.04
HLA-DQA1-202ENST00000374949 WWC3Q9ULE0 1092 aa14.78□□□□□ -0.04
HLA-DQA1-202ENST00000374949 ADCY9O60503 1353 aa14.77□□□□□ -0.04
HLA-DQA1-202ENST00000374949 FLAD1Q8NFF5 587 aa14.77□□□□□ -0.05
HLA-DQA1-202ENST00000374949 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.05
HLA-DQA1-202ENST00000374949 RALBP1Q15311 655 aa14.76□□□□□ -0.05
HLA-DQA1-202ENST00000374949 PIGBQ92521 554 aa14.76□□□□□ -0.05
HLA-DQA1-202ENST00000374949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.75□□□□□ -0.05
HLA-DQA1-202ENST00000374949 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
HLA-DQA1-202ENST00000374949 ZNF526Q8TF50 670 aaPredicted RBP14.75□□□□□ -0.05
HLA-DQA1-202ENST00000374949 SMARCC1Q92922 1105 aaPredicted RBP14.75□□□□□ -0.05
HLA-DQA1-202ENST00000374949 CARD14Q9BXL6 1004 aa14.75□□□□□ -0.05
HLA-DQA1-202ENST00000374949 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
HLA-DQA1-202ENST00000374949 PPM1GO15355 546 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms