RNA–Protein interactions for RNA: ENST00000374762.3

NIPSNAP3B-201, Transcript of nipsnap homolog 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3B, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3B-201ENST00000374762 SPATA31A1Q5TZJ5 1347 aa13□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 SPATA31A5Q5VU36 1347 aa13□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 SPATA31A7Q8IWB4 1347 aa13□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 HNRNPUQ00839 825 aaKnown RBP eCLIP13□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 VPS72Q15906 364 aa13□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 TCP11L2Q8N4U5 519 aa13□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 IL2RBP14784 551 aa12.99□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 MEGF6O75095 1541 aa12.98□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 QTRT2Q9H974 415 aaKnown RBP12.97□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
NIPSNAP3B-201ENST00000374762 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 NFE2L2Q16236 605 aa12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 ZNF772Q68DY9 489 aaPredicted RBP12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 ATRNO75882 1429 aa12.96□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 RIPK4P57078 832 aa12.95□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 PARP4Q9UKK3 1724 aaKnown RBP12.95□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 DISP2A7MBM2 1401 aa12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 A0A0G2JS52 829 aa12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 ZCRB1Q8TBF4 217 aaKnown RBP12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 GLI3P10071 1580 aa12.93□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 WNK3Q9BYP7 1800 aa12.93□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 EXOC5O00471 708 aa12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 C1orf141Q5JVX7 400 aa12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 DDB1Q16531 1140 aa12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 RGS17Q9UGC6 210 aaPredicted RBP12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 CYP27B1O15528 508 aa12.91□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 ZBED9Q6R2W3 1325 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 PHKG2P15735 406 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 DCTN1Q14203 1278 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 CCDC27Q2M243 656 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 IFNL2Q8IZJ0 200 aa12.9□□□□□ -0.34
NIPSNAP3B-201ENST00000374762 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 MCM10Q7L590 875 aa12.89□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 TNS2Q63HR2 1409 aa12.89□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 LRRC37A3O60309 1634 aa12.89□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 THUMPD2Q9BTF0 503 aaKnown RBP12.89□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 RXRBP28702 533 aa12.88□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 SEPT12Q8IYM1 358 aa12.88□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 ZNF521Q96K83 1311 aa12.87□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 PDE3BQ13370 1112 aa12.86□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 CALD1Q05682 793 aaKnown RBP12.84□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 LAS1LQ9Y4W2 734 aaKnown RBP12.84□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 TEFQ10587 303 aa12.84□□□□□ -0.35
NIPSNAP3B-201ENST00000374762 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
NIPSNAP3B-201ENST00000374762 FAM182BQ5T319 152 aa12.82□□□□□ -0.36
NIPSNAP3B-201ENST00000374762 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
NIPSNAP3B-201ENST00000374762 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
NIPSNAP3B-201ENST00000374762 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
NIPSNAP3B-201ENST00000374762 IL16Q14005 1332 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms