RNA–Protein interactions for RNA: ENST00000374738.3

PGAP1-202, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 5

Gene PGAP1, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-202ENST00000374738 LRRC37A3O60309 1634 aa29.42■■■□□ 2.3
PGAP1-202ENST00000374738 SULT6B1Q6IMI4 303 aa29.41■■■□□ 2.3
PGAP1-202ENST00000374738 SPG7Q9UQ90 795 aa29.4■■■□□ 2.3
PGAP1-202ENST00000374738 BRWD3Q6RI45 1802 aa29.4■■■□□ 2.3
PGAP1-202ENST00000374738 UPF1Q92900 1129 aaKnown RBP eCLIP29.39■■■□□ 2.3
PGAP1-202ENST00000374738 RGPD1P0DJD0 1748 aa29.39■■■□□ 2.3
PGAP1-202ENST00000374738 RGPD2P0DJD1 1756 aa29.39■■■□□ 2.29
PGAP1-202ENST00000374738 AMOTQ4VCS5 1084 aa29.38■■■□□ 2.29
PGAP1-202ENST00000374738 ANP32CO43423 234 aa29.37■■■□□ 2.29
PGAP1-202ENST00000374738 PCDH11XQ9BZA7 1347 aa29.36■■■□□ 2.29
PGAP1-202ENST00000374738 PCDH11YQ9BZA8 1340 aa29.36■■■□□ 2.29
PGAP1-202ENST00000374738 U2SURPO15042 1029 aaKnown RBP29.35■■■□□ 2.29
PGAP1-202ENST00000374738 PLEKHO1Q53GL0 409 aaPredicted RBP29.35■■■□□ 2.29
PGAP1-202ENST00000374738 AEBP1Q8IUX7 1158 aa29.35■■■□□ 2.29
PGAP1-202ENST00000374738 DDX54Q8TDD1 881 aaKnown RBP29.33■■■□□ 2.29
PGAP1-202ENST00000374738 FCHSD2O94868 740 aa29.32■■■□□ 2.28
PGAP1-202ENST00000374738 FAM182BQ5T319 152 aa29.32■■■□□ 2.28
PGAP1-202ENST00000374738 NKX1-1Q15270 411 aaPredicted RBP29.31■■■□□ 2.28
PGAP1-202ENST00000374738 CYP27B1O15528 508 aa29.29■■■□□ 2.28
PGAP1-202ENST00000374738 HMOX1P09601 288 aa29.29■■■□□ 2.28
PGAP1-202ENST00000374738 U2AF1L5P0DN76 240 aaPredicted RBP29.29■■■□□ 2.28
PGAP1-202ENST00000374738 U2AF1Q01081 240 aaKnown RBP eCLIP29.29■■■□□ 2.28
PGAP1-202ENST00000374738 IFNL2Q8IZJ0 200 aa29.29■■■□□ 2.28
PGAP1-202ENST00000374738 BCL11BQ9C0K0 894 aaPredicted RBP29.27■■■□□ 2.28
PGAP1-202ENST00000374738 SF3B2Q13435 895 aaKnown RBP29.26■■■□□ 2.27
PGAP1-202ENST00000374738 RSPH6AQ9H0K4 717 aa29.26■■■□□ 2.27
PGAP1-202ENST00000374738 PNNQ9H307 717 aaKnown RBP29.26■■■□□ 2.27
PGAP1-202ENST00000374738 PKD1L3Q7Z443 1732 aa29.25■■■□□ 2.27
PGAP1-202ENST00000374738 HSP90AB1P08238 724 aaKnown RBP29.25■■■□□ 2.27
PGAP1-202ENST00000374738 PHKG2P15735 406 aa29.25■■■□□ 2.27
PGAP1-202ENST00000374738 TRIM37O94972 964 aa29.24■■■□□ 2.27
PGAP1-202ENST00000374738 ZNF530Q6P9A1 599 aaPredicted RBP29.2■■■□□ 2.26
PGAP1-202ENST00000374738 GAS2L2Q8NHY3 880 aa29.2■■■□□ 2.26
PGAP1-202ENST00000374738 PRKAR2BP31323 418 aa29.19■■■□□ 2.26
PGAP1-202ENST00000374738 AKAP4Q5JQC9 854 aa29.19■■■□□ 2.26
PGAP1-202ENST00000374738 C1orf141Q5JVX7 400 aa29.19■■■□□ 2.26
PGAP1-202ENST00000374738 DCAF5Q96JK2 942 aa29.19■■■□□ 2.26
PGAP1-202ENST00000374738 SHANK3Q9BYB0 1731 aa29.19■■■□□ 2.26
PGAP1-202ENST00000374738 BAG6P46379 1132 aa29.18■■■□□ 2.26
PGAP1-202ENST00000374738 PLSCR1O15162 318 aa29.17■■■□□ 2.26
PGAP1-202ENST00000374738 MTHFSDQ2M296 383 aaKnown RBP29.17■■■□□ 2.26
PGAP1-202ENST00000374738 NEFMP07197 916 aa29.15■■■□□ 2.26
PGAP1-202ENST00000374738 WDR43Q15061 677 aaKnown RBP eCLIP29.15■■■□□ 2.26
PGAP1-202ENST00000374738 PLEKHF1Q96S99 279 aa29.15■■■□□ 2.26
PGAP1-202ENST00000374738 EP400Q96L91 3159 aa29.15■■■□□ 2.26
PGAP1-202ENST00000374738 ERVV-2B6SEH9 535 aa29.14■■■□□ 2.26
PGAP1-202ENST00000374738 APBA3O96018 575 aa29.14■■■□□ 2.26
PGAP1-202ENST00000374738 PRIM1P49642 420 aaKnown RBP29.14■■■□□ 2.26
PGAP1-202ENST00000374738 PHACTR3Q96KR7 559 aa29.14■■■□□ 2.26
PGAP1-202ENST00000374738 KCNQ2O43526 872 aa29.13■■■□□ 2.25
PGAP1-202ENST00000374738 ACSBG1Q96GR2 724 aa29.13■■■□□ 2.25
PGAP1-202ENST00000374738 NHSQ6T4R5 1651 aa29.09■■■□□ 2.25
PGAP1-202ENST00000374738 CAMKK2Q96RR4 588 aa29.09■■■□□ 2.25
PGAP1-202ENST00000374738 SBF2Q86WG5 1849 aa29.08■■■□□ 2.25
PGAP1-202ENST00000374738 GNAT3A8MTJ3 354 aa29.08■■■□□ 2.25
PGAP1-202ENST00000374738 HTATSF1O43719 755 aaKnown RBP29.08■■■□□ 2.25
PGAP1-202ENST00000374738 PTF1AQ7RTS3 328 aa29.08■■■□□ 2.25
PGAP1-202ENST00000374738 ADAMTS8Q9UP79 889 aa29.08■■■□□ 2.25
PGAP1-202ENST00000374738 TNS1Q9HBL0 1735 aaKnown RBP29.06■■■□□ 2.24
PGAP1-202ENST00000374738 DIEXFQ68CQ4 756 aaKnown RBP29.06■■■□□ 2.24
PGAP1-202ENST00000374738 DEFB132Q7Z7B7 95 aa29.06■■■□□ 2.24
PGAP1-202ENST00000374738 PNISRQ8TF01 805 aaKnown RBP29.06■■■□□ 2.24
PGAP1-202ENST00000374738 SYTL4Q96C24 671 aaPredicted RBP29.06■■■□□ 2.24
PGAP1-202ENST00000374738 MRS2Q9HD23 443 aa29.06■■■□□ 2.24
PGAP1-202ENST00000374738 MAP3K5Q99683 1374 aa29.05■■■□□ 2.24
PGAP1-202ENST00000374738 MAPK8IP3Q9UPT6 1336 aa29.05■■■□□ 2.24
PGAP1-202ENST00000374738 EN1Q05925 392 aaPredicted RBP29.05■■■□□ 2.24
PGAP1-202ENST00000374738 CCDC184Q52MB2 194 aa29.05■■■□□ 2.24
PGAP1-202ENST00000374738 MPRIPQ6WCQ1 1025 aa29.05■■■□□ 2.24
PGAP1-202ENST00000374738 KDM6AO15550 1401 aaPredicted RBP29.04■■■□□ 2.24
PGAP1-202ENST00000374738 RUNDC1Q96C34 613 aa29.04■■■□□ 2.24
PGAP1-202ENST00000374738 TMOD3Q9NYL9 352 aa29.04■■■□□ 2.24
PGAP1-202ENST00000374738 RNMTO43148 476 aaKnown RBP29.03■■■□□ 2.24
PGAP1-202ENST00000374738 HMGB2P26583 209 aaKnown RBP29.03■■■□□ 2.24
PGAP1-202ENST00000374738 PIGBQ92521 554 aa29.03■■■□□ 2.24
PGAP1-202ENST00000374738 NFE2L2Q16236 605 aa29.02■■■□□ 2.24
PGAP1-202ENST00000374738 SMARCC1Q92922 1105 aaPredicted RBP29.02■■■□□ 2.24
PGAP1-202ENST00000374738 CCER2I3L3R5 266 aa29.01■■■□□ 2.23
PGAP1-202ENST00000374738 CABP4P57796 275 aa29.01■■■□□ 2.23
PGAP1-202ENST00000374738 LGR6Q9HBX8 967 aa29■■■□□ 2.23
PGAP1-202ENST00000374738 EZH2Q15910 746 aaKnown RBP28.99■■■□□ 2.23
PGAP1-202ENST00000374738 IL17REQ8NFR9 667 aa28.99■■■□□ 2.23
PGAP1-202ENST00000374738 RTF1Q92541 710 aaKnown RBP28.99■■■□□ 2.23
PGAP1-202ENST00000374738 SLC52A2Q9HAB3 445 aa28.99■■■□□ 2.23
PGAP1-202ENST00000374738 DOT1LQ8TEK3 1739 aa28.99■■■□□ 2.23
PGAP1-202ENST00000374738 CEMIPQ8WUJ3 1361 aa28.99■■■□□ 2.23
PGAP1-202ENST00000374738 SLC27A3Q5K4L6 730 aa28.98■■■□□ 2.23
PGAP1-202ENST00000374738 RGPD3A6NKT7 1758 aaPredicted RBP28.98■■■□□ 2.23
PGAP1-202ENST00000374738 RGPD4Q7Z3J3 1758 aa28.98■■■□□ 2.23
PGAP1-202ENST00000374738 ADAMTS7Q9UKP4 1686 aa28.97■■■□□ 2.23
PGAP1-202ENST00000374738 NFATC2IPQ8NCF5 419 aa28.97■■■□□ 2.23
PGAP1-202ENST00000374738 PROM2Q8N271 834 aa28.96■■■□□ 2.23
PGAP1-202ENST00000374738 TOGARAM1Q9Y4F4 1720 aa28.96■■■□□ 2.23
PGAP1-202ENST00000374738 TXNRD1Q16881 649 aa28.95■■■□□ 2.22
PGAP1-202ENST00000374738 MRC1P22897 1456 aa28.95■■■□□ 2.22
PGAP1-202ENST00000374738 TMPOP42166 694 aaKnown RBP28.94■■■□□ 2.22
PGAP1-202ENST00000374738 LMOD3Q0VAK6 560 aa28.93■■■□□ 2.22
PGAP1-202ENST00000374738 ATG3Q9NT62 314 aa28.93■■■□□ 2.22
PGAP1-202ENST00000374738 BTAF1O14981 1849 aa28.92■■■□□ 2.22
PGAP1-202ENST00000374738 TEFQ10587 303 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms