RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
VSIG4-201ENST00000374737 DDX54Q8TDD1 881 aaKnown RBP11.98□□□□□ -0.49
VSIG4-201ENST00000374737 FAM208AQ9UK61 1670 aaKnown RBP11.98□□□□□ -0.49
VSIG4-201ENST00000374737 GLI3P10071 1580 aa11.98□□□□□ -0.49
VSIG4-201ENST00000374737 NCAPD2Q15021 1401 aa11.98□□□□□ -0.49
VSIG4-201ENST00000374737 EXOC5O00471 708 aa11.97□□□□□ -0.49
VSIG4-201ENST00000374737 NEFMP07197 916 aa11.97□□□□□ -0.49
VSIG4-201ENST00000374737 MTHFSDQ2M296 383 aaKnown RBP11.97□□□□□ -0.49
VSIG4-201ENST00000374737 SEPT12Q8IYM1 358 aa11.97□□□□□ -0.49
VSIG4-201ENST00000374737 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
VSIG4-201ENST00000374737 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
VSIG4-201ENST00000374737 PNNQ9H307 717 aaKnown RBP11.97□□□□□ -0.49
VSIG4-201ENST00000374737 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
VSIG4-201ENST00000374737 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
VSIG4-201ENST00000374737 MAPK8IP3Q9UPT6 1336 aa11.97□□□□□ -0.49
VSIG4-201ENST00000374737 APAF1O14727 1248 aa11.97□□□□□ -0.49
VSIG4-201ENST00000374737 DDB1Q16531 1140 aa11.97□□□□□ -0.49
VSIG4-201ENST00000374737 PLEKHO1Q53GL0 409 aaPredicted RBP11.97□□□□□ -0.49
VSIG4-201ENST00000374737 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
VSIG4-201ENST00000374737 FAM182BQ5T319 152 aa11.96□□□□□ -0.49
VSIG4-201ENST00000374737 CDCA7Q9BWT1 371 aaPredicted RBP11.96□□□□□ -0.49
VSIG4-201ENST00000374737 DISP2A7MBM2 1401 aa11.96□□□□□ -0.5
VSIG4-201ENST00000374737 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
VSIG4-201ENST00000374737 PDE3BQ13370 1112 aa11.95□□□□□ -0.5
VSIG4-201ENST00000374737 AMOTQ4VCS5 1084 aa11.95□□□□□ -0.5
VSIG4-201ENST00000374737 ZNF530Q6P9A1 599 aaPredicted RBP11.95□□□□□ -0.5
VSIG4-201ENST00000374737 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
VSIG4-201ENST00000374737 CYP27B1O15528 508 aa11.94□□□□□ -0.5
VSIG4-201ENST00000374737 TMPOP42166 694 aaKnown RBP11.93□□□□□ -0.5
VSIG4-201ENST00000374737 RIPK4P57078 832 aa11.93□□□□□ -0.5
VSIG4-201ENST00000374737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
VSIG4-201ENST00000374737 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
VSIG4-201ENST00000374737 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
VSIG4-201ENST00000374737 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
VSIG4-201ENST00000374737 MARCH10Q8NA82 808 aaPredicted RBP11.93□□□□□ -0.5
VSIG4-201ENST00000374737 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
VSIG4-201ENST00000374737 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
VSIG4-201ENST00000374737 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
VSIG4-201ENST00000374737 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
VSIG4-201ENST00000374737 PHKG2P15735 406 aa11.92□□□□□ -0.5
VSIG4-201ENST00000374737 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
VSIG4-201ENST00000374737 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
VSIG4-201ENST00000374737 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
VSIG4-201ENST00000374737 LGR6Q9HBX8 967 aa11.91□□□□□ -0.5
VSIG4-201ENST00000374737 GNAT3A8MTJ3 354 aa11.9□□□□□ -0.5
VSIG4-201ENST00000374737 MSH5O43196 834 aa11.9□□□□□ -0.5
VSIG4-201ENST00000374737 HNRNPUQ00839 825 aaKnown RBP eCLIP11.9□□□□□ -0.5
VSIG4-201ENST00000374737 MCM10Q7L590 875 aa11.9□□□□□ -0.5
VSIG4-201ENST00000374737 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
VSIG4-201ENST00000374737 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
VSIG4-201ENST00000374737 PARP4Q9UKK3 1724 aaKnown RBP11.9□□□□□ -0.5
VSIG4-201ENST00000374737 RGS12O14924 1447 aa11.9□□□□□ -0.5
VSIG4-201ENST00000374737 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
VSIG4-201ENST00000374737 TNS2Q63HR2 1409 aa11.9□□□□□ -0.51
VSIG4-201ENST00000374737 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
VSIG4-201ENST00000374737 IL17REQ8NFR9 667 aa11.89□□□□□ -0.51
VSIG4-201ENST00000374737 ACSBG1Q96GR2 724 aa11.89□□□□□ -0.51
VSIG4-201ENST00000374737 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
VSIG4-201ENST00000374737 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
VSIG4-201ENST00000374737 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
VSIG4-201ENST00000374737 MAP3K5Q99683 1374 aa11.88□□□□□ -0.51
VSIG4-201ENST00000374737 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
VSIG4-201ENST00000374737 PKD1L3Q7Z443 1732 aa11.87□□□□□ -0.51
VSIG4-201ENST00000374737 RNMTO43148 476 aaKnown RBP11.87□□□□□ -0.51
VSIG4-201ENST00000374737 DCAF5Q96JK2 942 aa11.87□□□□□ -0.51
VSIG4-201ENST00000374737 HSP90AB1P08238 724 aaKnown RBP11.86□□□□□ -0.51
VSIG4-201ENST00000374737 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
VSIG4-201ENST00000374737 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
VSIG4-201ENST00000374737 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
VSIG4-201ENST00000374737 KCNQ2O43526 872 aa11.86□□□□□ -0.51
VSIG4-201ENST00000374737 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
VSIG4-201ENST00000374737 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
VSIG4-201ENST00000374737 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
VSIG4-201ENST00000374737 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
VSIG4-201ENST00000374737 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
VSIG4-201ENST00000374737 KDM6AO15550 1401 aaPredicted RBP11.85□□□□□ -0.51
VSIG4-201ENST00000374737 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
VSIG4-201ENST00000374737 CABP4P57796 275 aa11.85□□□□□ -0.51
VSIG4-201ENST00000374737 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
VSIG4-201ENST00000374737 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
VSIG4-201ENST00000374737 MIS18AQ9NYP9 233 aa11.85□□□□□ -0.51
VSIG4-201ENST00000374737 EP400Q96L91 3159 aa11.84□□□□□ -0.51
VSIG4-201ENST00000374737 TEFQ10587 303 aa11.84□□□□□ -0.51
VSIG4-201ENST00000374737 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
VSIG4-201ENST00000374737 DLG5Q8TDM6 1919 aa11.83□□□□□ -0.52
VSIG4-201ENST00000374737 TRIM37O94972 964 aa11.83□□□□□ -0.52
VSIG4-201ENST00000374737 CCDC27Q2M243 656 aa11.83□□□□□ -0.52
VSIG4-201ENST00000374737 SLC52A2Q9HAB3 445 aa11.83□□□□□ -0.52
VSIG4-201ENST00000374737 CEMIPQ8WUJ3 1361 aa11.82□□□□□ -0.52
VSIG4-201ENST00000374737 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
VSIG4-201ENST00000374737 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
VSIG4-201ENST00000374737 PIGBQ92521 554 aa11.82□□□□□ -0.52
VSIG4-201ENST00000374737 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
VSIG4-201ENST00000374737 SLC39A6Q13433 755 aa11.81□□□□□ -0.52
VSIG4-201ENST00000374737 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
VSIG4-201ENST00000374737 CDCA7LQ96GN5 454 aa11.81□□□□□ -0.52
VSIG4-201ENST00000374737 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
VSIG4-201ENST00000374737 BTBD11A6QL63 1104 aa11.81□□□□□ -0.52
VSIG4-201ENST00000374737 ILDR2Q71H61 639 aa11.81□□□□□ -0.52
VSIG4-201ENST00000374737 NGEFQ8N5V2 710 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms