RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
PHF1-202ENST00000374516 TWISTNBQ3B726 338 aaPredicted RBP21.3■■□□□ 1
PHF1-202ENST00000374516 KIF16BQ96L93 1317 aa21.3■■□□□ 1
PHF1-202ENST00000374516 ARHGEF10O15013 1369 aa21.3■■□□□ 1
PHF1-202ENST00000374516 TMEM57Q8N5G2 664 aa21.29■■□□□ 1
PHF1-202ENST00000374516 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
PHF1-202ENST00000374516 IPO8O15397 1037 aaKnown RBP21.29■■□□□ 1
PHF1-202ENST00000374516 L1TD1Q5T7N2 865 aaKnown RBP21.29■■□□□ 1
PHF1-202ENST00000374516 ZBTB7CA1YPR0 619 aa21.28■■□□□ 1
PHF1-202ENST00000374516 TBC1D2Q9BYX2 928 aa21.28■■□□□ 1
PHF1-202ENST00000374516 IGSF1Q8N6C5 1336 aa21.28■■□□□ 1
PHF1-202ENST00000374516 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
PHF1-202ENST00000374516 KRT24Q2M2I5 525 aa21.27■□□□□ 0.99
PHF1-202ENST00000374516 ZNF428Q96B54 188 aa21.27■□□□□ 0.99
PHF1-202ENST00000374516 MRPL50Q8N5N7 158 aaKnown RBP21.26■□□□□ 0.99
PHF1-202ENST00000374516 MARF1Q9Y4F3 1742 aaKnown RBP21.26■□□□□ 0.99
PHF1-202ENST00000374516 LMOD2Q6P5Q4 547 aa21.26■□□□□ 0.99
PHF1-202ENST00000374516 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
PHF1-202ENST00000374516 DDX19BQ9UMR2 479 aa21.26■□□□□ 0.99
PHF1-202ENST00000374516 KDRP35968 1356 aa21.25■□□□□ 0.99
PHF1-202ENST00000374516 UBE2Q2Q8WVN8 375 aa21.24■□□□□ 0.99
PHF1-202ENST00000374516 USHBP1Q8N6Y0 703 aa21.24■□□□□ 0.99
PHF1-202ENST00000374516 RWDD1Q9H446 243 aaPredicted RBP21.24■□□□□ 0.99
PHF1-202ENST00000374516 CHL1O00533 1208 aa21.23■□□□□ 0.99
PHF1-202ENST00000374516 HSPA2P54652 639 aa21.23■□□□□ 0.99
PHF1-202ENST00000374516 RTF1Q92541 710 aaKnown RBP21.23■□□□□ 0.99
PHF1-202ENST00000374516 BRPF1P55201 1214 aaPredicted RBP21.22■□□□□ 0.99
PHF1-202ENST00000374516 RRAGDQ9NQL2 400 aaPredicted RBP21.21■□□□□ 0.99
PHF1-202ENST00000374516 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
PHF1-202ENST00000374516 KIF24Q5T7B8 1368 aa21.2■□□□□ 0.99
PHF1-202ENST00000374516 ZBTB40Q9NUA8 1239 aa21.2■□□□□ 0.98
PHF1-202ENST00000374516 GAS2L2Q8NHY3 880 aa21.19■□□□□ 0.98
PHF1-202ENST00000374516 IP6K1Q92551 441 aa21.19■□□□□ 0.98
PHF1-202ENST00000374516 CRB1P82279 1406 aa21.19■□□□□ 0.98
PHF1-202ENST00000374516 NWD1Q149M9 1564 aa21.18■□□□□ 0.98
PHF1-202ENST00000374516 KCNH5Q8NCM2 988 aa21.18■□□□□ 0.98
PHF1-202ENST00000374516 KRT28Q7Z3Y7 464 aa21.17■□□□□ 0.98
PHF1-202ENST00000374516 GCP02774 474 aa21.17■□□□□ 0.98
PHF1-202ENST00000374516 XRCC6P12956 609 aaKnown RBP eCLIP21.17■□□□□ 0.98
PHF1-202ENST00000374516 MCM4P33991 863 aa21.17■□□□□ 0.98
PHF1-202ENST00000374516 ARHGAP45Q92619 1136 aa21.17■□□□□ 0.98
PHF1-202ENST00000374516 USP54Q70EL1 1684 aa21.16■□□□□ 0.98
PHF1-202ENST00000374516 NBPF6Q5VWK0 638 aa21.16■□□□□ 0.98
PHF1-202ENST00000374516 SPRYD3Q8NCJ5 442 aa21.16■□□□□ 0.98
PHF1-202ENST00000374516 NBPF4Q96M43 638 aa21.16■□□□□ 0.98
PHF1-202ENST00000374516 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
PHF1-202ENST00000374516 FSD2A1L4K1 749 aa21.16■□□□□ 0.98
PHF1-202ENST00000374516 GOLGA6L3A6NEY3 463 aa21.16■□□□□ 0.98
PHF1-202ENST00000374516 TMEM94Q12767 1356 aa21.15■□□□□ 0.98
PHF1-202ENST00000374516 DDX17Q92841 729 aaKnown RBP21.15■□□□□ 0.98
PHF1-202ENST00000374516 C1orf167Q5SNV9 1468 aa21.15■□□□□ 0.98
PHF1-202ENST00000374516 GNAT3A8MTJ3 354 aa21.15■□□□□ 0.98
PHF1-202ENST00000374516 ATF3P18847 181 aa21.15■□□□□ 0.98
PHF1-202ENST00000374516 NFAT5O94916 1531 aa21.15■□□□□ 0.98
PHF1-202ENST00000374516 RTL1A6NKG5 1358 aa21.14■□□□□ 0.98
PHF1-202ENST00000374516 LTN1O94822 1766 aa21.14■□□□□ 0.97
PHF1-202ENST00000374516 LRRC59Q96AG4 307 aaKnown RBP21.14■□□□□ 0.97
PHF1-202ENST00000374516 ZBTB7BO15156 539 aaPredicted RBP21.13■□□□□ 0.97
PHF1-202ENST00000374516 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
PHF1-202ENST00000374516 C1orf115Q9H7X2 142 aa21.13■□□□□ 0.97
PHF1-202ENST00000374516 HDAC1Q13547 482 aaPredicted RBP21.12■□□□□ 0.97
PHF1-202ENST00000374516 CHMP5Q9NZZ3 219 aa21.12■□□□□ 0.97
PHF1-202ENST00000374516 KIAA0232Q92628 1395 aa21.11■□□□□ 0.97
PHF1-202ENST00000374516 ABCC4O15439 1325 aa21.11■□□□□ 0.97
PHF1-202ENST00000374516 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
PHF1-202ENST00000374516 ARHGEF25Q86VW2 580 aa21.11■□□□□ 0.97
PHF1-202ENST00000374516 ARXQ96QS3 562 aa21.11■□□□□ 0.97
PHF1-202ENST00000374516 API5Q9BZZ5 524 aaKnown RBP21.11■□□□□ 0.97
PHF1-202ENST00000374516 GZF1Q9H116 711 aaPredicted RBP21.1■□□□□ 0.97
PHF1-202ENST00000374516 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
PHF1-202ENST00000374516 TRAK2O60296 914 aa21.09■□□□□ 0.97
PHF1-202ENST00000374516 SLC4A2P04920 1241 aa21.09■□□□□ 0.97
PHF1-202ENST00000374516 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
PHF1-202ENST00000374516 MFAP1P55081 439 aaKnown RBP21.09■□□□□ 0.97
PHF1-202ENST00000374516 AXIN2Q9Y2T1 843 aa21.08■□□□□ 0.97
PHF1-202ENST00000374516 MSH6P52701 1360 aa21.08■□□□□ 0.96
PHF1-202ENST00000374516 MAP3K5Q99683 1374 aa21.08■□□□□ 0.96
PHF1-202ENST00000374516 ZC3H6P61129 1189 aaKnown RBP21.07■□□□□ 0.96
PHF1-202ENST00000374516 PANK2Q9BZ23 570 aa21.07■□□□□ 0.96
PHF1-202ENST00000374516 STRCP1A6NGW2 1772 aa21.07■□□□□ 0.96
PHF1-202ENST00000374516 MST1RQ04912 1400 aa21.05■□□□□ 0.96
PHF1-202ENST00000374516 SMC5Q8IY18 1101 aa21.05■□□□□ 0.96
PHF1-202ENST00000374516 ANKRD24Q8TF21 1146 aa21.05■□□□□ 0.96
PHF1-202ENST00000374516 NECTIN2Q92692 538 aa21.04■□□□□ 0.96
PHF1-202ENST00000374516 G2E3Q7L622 706 aa21.04■□□□□ 0.96
PHF1-202ENST00000374516 LGR6Q9HBX8 967 aa21.04■□□□□ 0.96
PHF1-202ENST00000374516 TAF7Q15545 349 aaPredicted RBP21.03■□□□□ 0.96
PHF1-202ENST00000374516 CHMP4BQ9H444 224 aaKnown RBP21.03■□□□□ 0.96
PHF1-202ENST00000374516 KDM4FA0A1W2PPD8 638 aa21.03■□□□□ 0.96
PHF1-202ENST00000374516 CLCN1P35523 988 aa21.03■□□□□ 0.96
PHF1-202ENST00000374516 MRE11P49959 708 aa21.03■□□□□ 0.96
PHF1-202ENST00000374516 CADPS2Q86UW7 1296 aa21.03■□□□□ 0.96
PHF1-202ENST00000374516 TRPM3Q9HCF6 1732 aaPredicted RBP21.02■□□□□ 0.96
PHF1-202ENST00000374516 SIRT2Q8IXJ6 389 aa21.02■□□□□ 0.96
PHF1-202ENST00000374516 CABLES1Q8TDN4 633 aa21.02■□□□□ 0.96
PHF1-202ENST00000374516 SLIT3O75094 1523 aa21.02■□□□□ 0.96
PHF1-202ENST00000374516 RGPD2P0DJD1 1756 aa21.02■□□□□ 0.95
PHF1-202ENST00000374516 HSCBQ8IWL3 235 aa21.01■□□□□ 0.95
PHF1-202ENST00000374516 RGS12O14924 1447 aa21.01■□□□□ 0.95
PHF1-202ENST00000374516 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms