RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
CD28-202ENST00000374481 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
CD28-202ENST00000374481 FOSBP53539 338 aa12.04□□□□□ -0.48
CD28-202ENST00000374481 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
CD28-202ENST00000374481 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
CD28-202ENST00000374481 VPS18Q9P253 973 aa12.04□□□□□ -0.48
CD28-202ENST00000374481 HNRNPH2P55795 449 aaKnown RBP12.04□□□□□ -0.48
CD28-202ENST00000374481 ICE2Q659A1 982 aa12.04□□□□□ -0.48
CD28-202ENST00000374481 OLFM4Q6UX06 510 aa12.04□□□□□ -0.48
CD28-202ENST00000374481 LRCH2Q5VUJ6 765 aa12.03□□□□□ -0.48
CD28-202ENST00000374481 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
CD28-202ENST00000374481 CNPY4Q8N129 248 aa12.03□□□□□ -0.48
CD28-202ENST00000374481 DNAI1Q9UI46 699 aa12.03□□□□□ -0.48
CD28-202ENST00000374481 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
CD28-202ENST00000374481 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
CD28-202ENST00000374481 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
CD28-202ENST00000374481 DYDC1Q8WWB3 177 aa12.03□□□□□ -0.48
CD28-202ENST00000374481 TMX3Q96JJ7 454 aa12.03□□□□□ -0.48
CD28-202ENST00000374481 RNF187Q5TA31 235 aaPredicted RBP12.03□□□□□ -0.48
CD28-202ENST00000374481 GBP2P32456 591 aaPredicted RBP12.02□□□□□ -0.48
CD28-202ENST00000374481 HDAC1Q13547 482 aaPredicted RBP12.02□□□□□ -0.48
CD28-202ENST00000374481 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.48
CD28-202ENST00000374481 BCCIPQ9P287 314 aaKnown RBP eCLIP12.02□□□□□ -0.48
CD28-202ENST00000374481 PCF11O94913 1555 aaKnown RBP12.02□□□□□ -0.48
CD28-202ENST00000374481 LOC102724159A0A0B4J2E5 919 aa12.02□□□□□ -0.49
CD28-202ENST00000374481 PWP2Q15269 919 aaKnown RBP12.02□□□□□ -0.49
CD28-202ENST00000374481 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.49
CD28-202ENST00000374481 CHMP4CQ96CF2 233 aa12.02□□□□□ -0.49
CD28-202ENST00000374481 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 EBAG9O00559 213 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 SRRTQ9BXP5 876 aaKnown RBP12.01□□□□□ -0.49
CD28-202ENST00000374481 MICALCLQ6ZW33 695 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 ZSWIM4Q9H7M6 989 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 DDX19AQ9NUU7 478 aaKnown RBP12.01□□□□□ -0.49
CD28-202ENST00000374481 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
CD28-202ENST00000374481 GOLGA6L7A0A1B0GV03 622 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 CBFA2T2O43439 604 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 MTHFSP49914 203 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 RPAINQ86UA6 219 aa12.01□□□□□ -0.49
CD28-202ENST00000374481 SCAND2PQ9GZW5 306 aaPredicted RBP12.01□□□□□ -0.49
CD28-202ENST00000374481 POTEB2H3BUK9 544 aa12□□□□□ -0.49
CD28-202ENST00000374481 ZNF215Q9UL58 517 aaPredicted RBP12□□□□□ -0.49
CD28-202ENST00000374481 RRP12Q5JTH9 1297 aaKnown RBP12□□□□□ -0.49
CD28-202ENST00000374481 ANO10Q9NW15 660 aa12□□□□□ -0.49
CD28-202ENST00000374481 HOOK1Q9UJC3 728 aaKnown RBP12□□□□□ -0.49
CD28-202ENST00000374481 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
CD28-202ENST00000374481 CAVIN2O95810 425 aa12□□□□□ -0.49
CD28-202ENST00000374481 MAP9Q49MG5 647 aa12□□□□□ -0.49
CD28-202ENST00000374481 ANO6Q4KMQ2 910 aa12□□□□□ -0.49
CD28-202ENST00000374481 CEP57Q86XR8 500 aa12□□□□□ -0.49
CD28-202ENST00000374481 STX6O43752 255 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 OAS2P29728 719 aaKnown RBP11.99□□□□□ -0.49
CD28-202ENST00000374481 NUCB1Q02818 461 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 SYT10Q6XYQ8 523 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 PHACTR2O75167 634 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 TRIM27P14373 513 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 CFAP100Q494V2 611 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 NBPF11Q86T75 865 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 DDX41Q9UJV9 622 aaKnown RBP11.99□□□□□ -0.49
CD28-202ENST00000374481 ME1P48163 572 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 GNG11P61952 73 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 E2F4Q16254 413 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 SYNE3Q6ZMZ3 975 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 A0A1B0GUA9 196 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 TUBB4AP04350 444 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 TMC6Q7Z403 805 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 CYP46A1Q9Y6A2 500 aa11.99□□□□□ -0.49
CD28-202ENST00000374481 MPHOSPH10O00566 681 aaKnown RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 EZRP15311 586 aaKnown RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 AKAP17AQ02040 695 aaKnown RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 CPSF2Q9P2I0 782 aaKnown RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 PPP6R1Q9UPN7 881 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 ANKRD30BQ9BXX2 1392 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 CCDC69A6NI79 296 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 PSMA5P28066 241 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 RRP15Q9Y3B9 282 aaKnown RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 RAD51AP2Q09MP3 1159 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 DNAJC21Q5F1R6 531 aaKnown RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 PDLIM2Q96JY6 352 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 PAIP2Q9BPZ3 127 aaKnown RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 CFAP45Q9UL16 551 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 MYO6Q9UM54 1294 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 USP19O94966 1318 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 MYO1CO00159 1063 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 GNAI1P63096 354 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
CD28-202ENST00000374481 KIAA1328Q86T90 577 aa11.98□□□□□ -0.49
CD28-202ENST00000374481 RLBP1P12271 317 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 NEBLO76041 1014 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 TYRO3Q06418 890 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 LUZP1Q86V48 1076 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 CCDC150Q8NCX0 1101 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 GOLGA5Q8TBA6 731 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 ZSCAN31Q96LW9 406 aaPredicted RBP11.97□□□□□ -0.49
CD28-202ENST00000374481 SMARCE1Q969G3 411 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms