RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 OVOS2A0A0G2JMS6 1433 aa13.23□□□□□ -0.29
PDZD11-202ENST00000374454 DDB1Q16531 1140 aa13.23□□□□□ -0.29
PDZD11-202ENST00000374454 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
PDZD11-202ENST00000374454 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
PDZD11-202ENST00000374454 MEGF6O75095 1541 aa13.23□□□□□ -0.29
PDZD11-202ENST00000374454 THSD7AQ9UPZ6 1657 aa13.22□□□□□ -0.29
PDZD11-202ENST00000374454 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
PDZD11-202ENST00000374454 PLEKHO1Q53GL0 409 aaPredicted RBP13.22□□□□□ -0.29
PDZD11-202ENST00000374454 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
PDZD11-202ENST00000374454 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
PDZD11-202ENST00000374454 A0A0G2JS52 829 aa13.21□□□□□ -0.29
PDZD11-202ENST00000374454 MYT1Q01538 1121 aa13.21□□□□□ -0.29
PDZD11-202ENST00000374454 PLEKHF1Q96S99 279 aa13.21□□□□□ -0.29
PDZD11-202ENST00000374454 RGS12O14924 1447 aa13.21□□□□□ -0.3
PDZD11-202ENST00000374454 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
PDZD11-202ENST00000374454 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
PDZD11-202ENST00000374454 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
PDZD11-202ENST00000374454 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
PDZD11-202ENST00000374454 MARCH10Q8NA82 808 aaPredicted RBP13.19□□□□□ -0.3
PDZD11-202ENST00000374454 PCDH11XQ9BZA7 1347 aa13.18□□□□□ -0.3
PDZD11-202ENST00000374454 PCDH11YQ9BZA8 1340 aa13.18□□□□□ -0.3
PDZD11-202ENST00000374454 NEFMP07197 916 aa13.18□□□□□ -0.3
PDZD11-202ENST00000374454 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
PDZD11-202ENST00000374454 RUNDC1Q96C34 613 aa13.18□□□□□ -0.3
PDZD11-202ENST00000374454 PHACTR3Q96KR7 559 aa13.18□□□□□ -0.3
PDZD11-202ENST00000374454 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
PDZD11-202ENST00000374454 CYP27B1O15528 508 aa13.17□□□□□ -0.3
PDZD11-202ENST00000374454 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
PDZD11-202ENST00000374454 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
PDZD11-202ENST00000374454 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
PDZD11-202ENST00000374454 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
PDZD11-202ENST00000374454 BCL9O00512 1426 aa13.16□□□□□ -0.3
PDZD11-202ENST00000374454 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
PDZD11-202ENST00000374454 PHKG2P15735 406 aa13.16□□□□□ -0.3
PDZD11-202ENST00000374454 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
PDZD11-202ENST00000374454 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
PDZD11-202ENST00000374454 LRRC37A3O60309 1634 aa13.16□□□□□ -0.3
PDZD11-202ENST00000374454 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
PDZD11-202ENST00000374454 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
PDZD11-202ENST00000374454 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
PDZD11-202ENST00000374454 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
PDZD11-202ENST00000374454 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
PDZD11-202ENST00000374454 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
PDZD11-202ENST00000374454 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
PDZD11-202ENST00000374454 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
PDZD11-202ENST00000374454 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
PDZD11-202ENST00000374454 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
PDZD11-202ENST00000374454 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
PDZD11-202ENST00000374454 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
PDZD11-202ENST00000374454 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
PDZD11-202ENST00000374454 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
PDZD11-202ENST00000374454 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
PDZD11-202ENST00000374454 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
PDZD11-202ENST00000374454 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
PDZD11-202ENST00000374454 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
PDZD11-202ENST00000374454 APAF1O14727 1248 aa13.1□□□□□ -0.31
PDZD11-202ENST00000374454 RIPK4P57078 832 aa13.1□□□□□ -0.31
PDZD11-202ENST00000374454 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
PDZD11-202ENST00000374454 LMOD3Q0VAK6 560 aa13.09□□□□□ -0.31
PDZD11-202ENST00000374454 MPRIPQ6WCQ1 1025 aa13.09□□□□□ -0.31
PDZD11-202ENST00000374454 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
PDZD11-202ENST00000374454 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
PDZD11-202ENST00000374454 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
PDZD11-202ENST00000374454 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
PDZD11-202ENST00000374454 EP400Q96L91 3159 aa13.09□□□□□ -0.31
PDZD11-202ENST00000374454 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
PDZD11-202ENST00000374454 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
PDZD11-202ENST00000374454 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
PDZD11-202ENST00000374454 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
PDZD11-202ENST00000374454 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
PDZD11-202ENST00000374454 CCDC125Q86Z20 511 aa13.07□□□□□ -0.32
PDZD11-202ENST00000374454 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
PDZD11-202ENST00000374454 KCNQ2O43526 872 aa13.06□□□□□ -0.32
PDZD11-202ENST00000374454 TRIM37O94972 964 aa13.06□□□□□ -0.32
PDZD11-202ENST00000374454 CABP4P57796 275 aa13.06□□□□□ -0.32
PDZD11-202ENST00000374454 ACSBG1Q96GR2 724 aa13.06□□□□□ -0.32
PDZD11-202ENST00000374454 RRP7AQ9Y3A4 280 aaKnown RBP13.06□□□□□ -0.32
PDZD11-202ENST00000374454 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
PDZD11-202ENST00000374454 MCM10Q7L590 875 aa13.05□□□□□ -0.32
PDZD11-202ENST00000374454 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
PDZD11-202ENST00000374454 PIGBQ92521 554 aa13.05□□□□□ -0.32
PDZD11-202ENST00000374454 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
PDZD11-202ENST00000374454 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
PDZD11-202ENST00000374454 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
PDZD11-202ENST00000374454 TEFQ10587 303 aa13.04□□□□□ -0.32
PDZD11-202ENST00000374454 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
PDZD11-202ENST00000374454 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
PDZD11-202ENST00000374454 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
PDZD11-202ENST00000374454 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDZD11-202ENST00000374454 PLSCR1O15162 318 aa13.02□□□□□ -0.33
PDZD11-202ENST00000374454 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
PDZD11-202ENST00000374454 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
PDZD11-202ENST00000374454 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
PDZD11-202ENST00000374454 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
PDZD11-202ENST00000374454 MRC1P22897 1456 aa13.02□□□□□ -0.33
PDZD11-202ENST00000374454 APBA3O96018 575 aa13.01□□□□□ -0.33
PDZD11-202ENST00000374454 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
PDZD11-202ENST00000374454 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
PDZD11-202ENST00000374454 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
PDZD11-202ENST00000374454 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms