RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 TRIM37O94972 964 aa21.48■■□□□ 1.03
HDHD3-202ENST00000374180 SULT6B1Q6IMI4 303 aa21.48■■□□□ 1.03
HDHD3-202ENST00000374180 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
HDHD3-202ENST00000374180 SPG7Q9UQ90 795 aa21.46■■□□□ 1.03
HDHD3-202ENST00000374180 U2SURPO15042 1029 aaKnown RBP21.45■■□□□ 1.03
HDHD3-202ENST00000374180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.45■■□□□ 1.022e-6■□□□□ 8.4
HDHD3-202ENST00000374180 NUDCQ9Y266 331 aa21.45■■□□□ 1.02
HDHD3-202ENST00000374180 COL3A1P02461 1466 aaPredicted RBP21.44■■□□□ 1.02
HDHD3-202ENST00000374180 PCDH11XQ9BZA7 1347 aa21.44■■□□□ 1.02
HDHD3-202ENST00000374180 PCDH11YQ9BZA8 1340 aa21.44■■□□□ 1.02
HDHD3-202ENST00000374180 BCL9O00512 1426 aa21.43■■□□□ 1.02
HDHD3-202ENST00000374180 HMOX1P09601 288 aa21.43■■□□□ 1.02
HDHD3-202ENST00000374180 PRKRIP1Q9H875 184 aaPredicted RBP21.43■■□□□ 1.02
HDHD3-202ENST00000374180 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
HDHD3-202ENST00000374180 KDRP35968 1356 aa21.42■■□□□ 1.02
HDHD3-202ENST00000374180 PLEKHO1Q53GL0 409 aaPredicted RBP21.41■■□□□ 1.02
HDHD3-202ENST00000374180 CYP27B1O15528 508 aa21.4■■□□□ 1.02
HDHD3-202ENST00000374180 APBA3O96018 575 aa21.4■■□□□ 1.02
HDHD3-202ENST00000374180 BAG6P46379 1132 aa21.4■■□□□ 1.02
HDHD3-202ENST00000374180 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
HDHD3-202ENST00000374180 BCL11BQ9C0K0 894 aaPredicted RBP21.4■■□□□ 1.02
HDHD3-202ENST00000374180 RGPD1P0DJD0 1748 aa21.4■■□□□ 1.02
HDHD3-202ENST00000374180 AMOTQ4VCS5 1084 aa21.39■■□□□ 1.02
HDHD3-202ENST00000374180 DEFB132Q7Z7B7 95 aa21.39■■□□□ 1.02
HDHD3-202ENST00000374180 PLEKHG2Q9H7P9 1386 aa21.39■■□□□ 1.02
HDHD3-202ENST00000374180 KCNQ2O43526 872 aa21.39■■□□□ 1.01
HDHD3-202ENST00000374180 U2AF1L5P0DN76 240 aaPredicted RBP21.38■■□□□ 1.01
HDHD3-202ENST00000374180 U2AF1Q01081 240 aaKnown RBP eCLIP21.38■■□□□ 1.01
HDHD3-202ENST00000374180 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
HDHD3-202ENST00000374180 KAT6BQ8WYB5 2073 aa21.37■■□□□ 1.01
HDHD3-202ENST00000374180 IFNL2Q8IZJ0 200 aa21.37■■□□□ 1.01
HDHD3-202ENST00000374180 PHKG2P15735 406 aa21.35■■□□□ 1.01
HDHD3-202ENST00000374180 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
HDHD3-202ENST00000374180 EN1Q05925 392 aaPredicted RBP21.35■■□□□ 1.01
HDHD3-202ENST00000374180 ZNF530Q6P9A1 599 aaPredicted RBP21.35■■□□□ 1.01
HDHD3-202ENST00000374180 SYTL4Q96C24 671 aaPredicted RBP21.35■■□□□ 1.01
HDHD3-202ENST00000374180 PKD1L3Q7Z443 1732 aa21.35■■□□□ 1.01
HDHD3-202ENST00000374180 SHANK3Q9BYB0 1731 aa21.35■■□□□ 1.01
HDHD3-202ENST00000374180 NKX1-1Q15270 411 aaPredicted RBP21.34■■□□□ 1.01
HDHD3-202ENST00000374180 SBF2Q86WG5 1849 aa21.34■■□□□ 1.01
HDHD3-202ENST00000374180 ANP32CO43423 234 aa21.33■■□□□ 1.01
HDHD3-202ENST00000374180 C1orf141Q5JVX7 400 aa21.32■■□□□ 1
HDHD3-202ENST00000374180 FCHSD2O94868 740 aa21.32■■□□□ 1
HDHD3-202ENST00000374180 RSPH6AQ9H0K4 717 aa21.32■■□□□ 1
HDHD3-202ENST00000374180 PLSCR1O15162 318 aa21.31■■□□□ 1
HDHD3-202ENST00000374180 HSP90AB1P08238 724 aaKnown RBP21.31■■□□□ 1
HDHD3-202ENST00000374180 PRKAR2BP31323 418 aa21.31■■□□□ 1
HDHD3-202ENST00000374180 EZH2Q15910 746 aaKnown RBP21.31■■□□□ 1
HDHD3-202ENST00000374180 CAMKK2Q96RR4 588 aa21.31■■□□□ 1
HDHD3-202ENST00000374180 TNS1Q9HBL0 1735 aaKnown RBP21.31■■□□□ 1
HDHD3-202ENST00000374180 MTHFSDQ2M296 383 aaKnown RBP21.29■■□□□ 1
HDHD3-202ENST00000374180 MPRIPQ6WCQ1 1025 aa21.28■■□□□ 1
HDHD3-202ENST00000374180 DCAF5Q96JK2 942 aa21.28■■□□□ 1
HDHD3-202ENST00000374180 AKAP4Q5JQC9 854 aa21.27■■□□□ 1
HDHD3-202ENST00000374180 NHSQ6T4R5 1651 aa21.27■■□□□ 1
HDHD3-202ENST00000374180 PHACTR3Q96KR7 559 aa21.26■□□□□ 0.99
HDHD3-202ENST00000374180 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
HDHD3-202ENST00000374180 ERVV-2B6SEH9 535 aa21.25■□□□□ 0.99
HDHD3-202ENST00000374180 NEFMP07197 916 aa21.25■□□□□ 0.99
HDHD3-202ENST00000374180 PNNQ9H307 717 aaKnown RBP21.25■□□□□ 0.99
HDHD3-202ENST00000374180 DOT1LQ8TEK3 1739 aa21.24■□□□□ 0.99
HDHD3-202ENST00000374180 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
HDHD3-202ENST00000374180 TMOD3Q9NYL9 352 aa21.24■□□□□ 0.99
HDHD3-202ENST00000374180 PIGBQ92521 554 aa21.23■□□□□ 0.99
HDHD3-202ENST00000374180 PROM2Q8N271 834 aa21.22■□□□□ 0.99
HDHD3-202ENST00000374180 BTAF1O14981 1849 aa21.22■□□□□ 0.99
HDHD3-202ENST00000374180 CABP4P57796 275 aa21.21■□□□□ 0.99
HDHD3-202ENST00000374180 TXNRD1Q16881 649 aa21.21■□□□□ 0.99
HDHD3-202ENST00000374180 KDM6AO15550 1401 aaPredicted RBP21.21■□□□□ 0.99
HDHD3-202ENST00000374180 GNAT3A8MTJ3 354 aa21.2■□□□□ 0.98
HDHD3-202ENST00000374180 LGR6Q9HBX8 967 aa21.2■□□□□ 0.98
HDHD3-202ENST00000374180 PLEKHF1Q96S99 279 aa21.2■□□□□ 0.98
HDHD3-202ENST00000374180 RNMTO43148 476 aaKnown RBP21.19■□□□□ 0.98
HDHD3-202ENST00000374180 TOGARAM1Q9Y4F4 1720 aa21.19■□□□□ 0.98
HDHD3-202ENST00000374180 CCDC184Q52MB2 194 aa21.18■□□□□ 0.98
HDHD3-202ENST00000374180 NFATC2IPQ8NCF5 419 aa21.18■□□□□ 0.98
HDHD3-202ENST00000374180 SMARCC1Q92922 1105 aaPredicted RBP21.18■□□□□ 0.98
HDHD3-202ENST00000374180 ADAMTS8Q9UP79 889 aa21.18■□□□□ 0.98
HDHD3-202ENST00000374180 MAPK8IP3Q9UPT6 1336 aa21.18■□□□□ 0.98
HDHD3-202ENST00000374180 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
HDHD3-202ENST00000374180 ITGB4P16144 1822 aa21.17■□□□□ 0.98
HDHD3-202ENST00000374180 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
HDHD3-202ENST00000374180 NBPF14Q5TI25 921 aa21.16■□□□□ 0.98
HDHD3-202ENST00000374180 MRS2Q9HD23 443 aa21.16■□□□□ 0.98
HDHD3-202ENST00000374180 ASAP1Q9ULH1 1129 aa21.16■□□□□ 0.98
HDHD3-202ENST00000374180 RGPD3A6NKT7 1758 aaPredicted RBP21.15■□□□□ 0.98
HDHD3-202ENST00000374180 RGPD4Q7Z3J3 1758 aa21.15■□□□□ 0.98
HDHD3-202ENST00000374180 IL17REQ8NFR9 667 aa21.15■□□□□ 0.98
HDHD3-202ENST00000374180 RTF1Q92541 710 aaKnown RBP21.15■□□□□ 0.98
HDHD3-202ENST00000374180 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
HDHD3-202ENST00000374180 PALLDQ8WX93 1383 aa21.14■□□□□ 0.98
HDHD3-202ENST00000374180 ATG3Q9NT62 314 aa21.14■□□□□ 0.98
HDHD3-202ENST00000374180 LRRC4BQ9NT99 713 aa21.14■□□□□ 0.98
HDHD3-202ENST00000374180 NFE2L2Q16236 605 aa21.13■□□□□ 0.97
HDHD3-202ENST00000374180 CCDC146Q8IYE0 955 aa21.13■□□□□ 0.97
HDHD3-202ENST00000374180 CCNL1Q9UK58 526 aaPredicted RBP21.13■□□□□ 0.97
HDHD3-202ENST00000374180 KCNQ4P56696 695 aa21.13■□□□□ 0.97
HDHD3-202ENST00000374180 RREB1Q92766 1687 aa21.12■□□□□ 0.97
HDHD3-202ENST00000374180 HTATSF1O43719 755 aaKnown RBP21.12■□□□□ 0.97
HDHD3-202ENST00000374180 TEFQ10587 303 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms