RNA–Protein interactions for RNA: ENST00000373894.7

SMPDL3B-202, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-202ENST00000373894 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.35
SMPDL3B-202ENST00000373894 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
SMPDL3B-202ENST00000373894 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
SMPDL3B-202ENST00000373894 KDRP35968 1356 aa17.21■□□□□ 0.35
SMPDL3B-202ENST00000373894 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
SMPDL3B-202ENST00000373894 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
SMPDL3B-202ENST00000373894 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3B-202ENST00000373894 EYA1Q99502 592 aa17.2■□□□□ 0.34
SMPDL3B-202ENST00000373894 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
SMPDL3B-202ENST00000373894 RRP9O43818 475 aaKnown RBP17.19■□□□□ 0.34
SMPDL3B-202ENST00000373894 PLIN1O60240 522 aa17.18■□□□□ 0.34
SMPDL3B-202ENST00000373894 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
SMPDL3B-202ENST00000373894 COL18A1P39060 1754 aa17.16■□□□□ 0.34
SMPDL3B-202ENST00000373894 ZC3H6P61129 1189 aaKnown RBP17.16■□□□□ 0.34
SMPDL3B-202ENST00000373894 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
SMPDL3B-202ENST00000373894 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
SMPDL3B-202ENST00000373894 CLCN1P35523 988 aa17.15■□□□□ 0.34
SMPDL3B-202ENST00000373894 ABCC6O95255 1503 aa17.15■□□□□ 0.34
SMPDL3B-202ENST00000373894 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
SMPDL3B-202ENST00000373894 AHDC1Q5TGY3 1603 aaPredicted RBP17.14■□□□□ 0.33
SMPDL3B-202ENST00000373894 IL16Q14005 1332 aa17.13■□□□□ 0.33
SMPDL3B-202ENST00000373894 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
SMPDL3B-202ENST00000373894 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
SMPDL3B-202ENST00000373894 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
SMPDL3B-202ENST00000373894 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
SMPDL3B-202ENST00000373894 AXIN2Q9Y2T1 843 aa17.12■□□□□ 0.33
SMPDL3B-202ENST00000373894 BECN1Q14457 450 aa17.12■□□□□ 0.33
SMPDL3B-202ENST00000373894 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
SMPDL3B-202ENST00000373894 CPDO75976 1380 aa17.11■□□□□ 0.33
SMPDL3B-202ENST00000373894 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
SMPDL3B-202ENST00000373894 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
SMPDL3B-202ENST00000373894 LRRC59Q96AG4 307 aaKnown RBP17.11■□□□□ 0.33
SMPDL3B-202ENST00000373894 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
SMPDL3B-202ENST00000373894 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
SMPDL3B-202ENST00000373894 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
SMPDL3B-202ENST00000373894 ERBB3P21860 1342 aa17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 C20orf194Q5TEA3 1177 aa17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 VSIG10Q8N0Z9 540 aa17.1■□□□□ 0.33
SMPDL3B-202ENST00000373894 FSD2A1L4K1 749 aa17.09■□□□□ 0.33
SMPDL3B-202ENST00000373894 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
SMPDL3B-202ENST00000373894 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
SMPDL3B-202ENST00000373894 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
SMPDL3B-202ENST00000373894 CHRNA2Q15822 529 aa17.08■□□□□ 0.33
SMPDL3B-202ENST00000373894 PHLPP1O60346 1717 aa17.08■□□□□ 0.32
SMPDL3B-202ENST00000373894 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
SMPDL3B-202ENST00000373894 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
SMPDL3B-202ENST00000373894 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
SMPDL3B-202ENST00000373894 NAP1L5Q96NT1 182 aaPredicted RBP17.07■□□□□ 0.32
SMPDL3B-202ENST00000373894 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
SMPDL3B-202ENST00000373894 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
SMPDL3B-202ENST00000373894 ANTXR1Q9H6X2 564 aa17.05■□□□□ 0.32
SMPDL3B-202ENST00000373894 COL16A1Q07092 1604 aaPredicted RBP17.05■□□□□ 0.32
SMPDL3B-202ENST00000373894 MCM10Q7L590 875 aa17.05■□□□□ 0.32
SMPDL3B-202ENST00000373894 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
SMPDL3B-202ENST00000373894 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
SMPDL3B-202ENST00000373894 GOLGA6L3A6NEY3 463 aa17.04■□□□□ 0.32
SMPDL3B-202ENST00000373894 TOM1O60784 492 aa17.03■□□□□ 0.32
SMPDL3B-202ENST00000373894 XRCC6P12956 609 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMPDL3B-202ENST00000373894 GNAI1P63096 354 aa17.03■□□□□ 0.32
SMPDL3B-202ENST00000373894 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
SMPDL3B-202ENST00000373894 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
SMPDL3B-202ENST00000373894 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
SMPDL3B-202ENST00000373894 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
SMPDL3B-202ENST00000373894 BCAR3O75815 825 aa17.02■□□□□ 0.32
SMPDL3B-202ENST00000373894 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
SMPDL3B-202ENST00000373894 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
SMPDL3B-202ENST00000373894 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
SMPDL3B-202ENST00000373894 MBIPQ9NS73 344 aa17.01■□□□□ 0.31
SMPDL3B-202ENST00000373894 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
SMPDL3B-202ENST00000373894 COL5A2P05997 1499 aaPredicted RBP17.01■□□□□ 0.31
SMPDL3B-202ENST00000373894 RGS3P49796 1198 aa17.01■□□□□ 0.31
SMPDL3B-202ENST00000373894 CRB1P82279 1406 aa17.01■□□□□ 0.31
SMPDL3B-202ENST00000373894 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
SMPDL3B-202ENST00000373894 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
SMPDL3B-202ENST00000373894 PIP4K2BP78356 416 aa17■□□□□ 0.31
SMPDL3B-202ENST00000373894 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
SMPDL3B-202ENST00000373894 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
SMPDL3B-202ENST00000373894 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
SMPDL3B-202ENST00000373894 COL14A1Q05707 1796 aaKnown RBP16.98■□□□□ 0.31
SMPDL3B-202ENST00000373894 MEGF6O75095 1541 aa16.98■□□□□ 0.31
SMPDL3B-202ENST00000373894 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
SMPDL3B-202ENST00000373894 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
SMPDL3B-202ENST00000373894 PKD1L3Q7Z443 1732 aa16.97■□□□□ 0.31
SMPDL3B-202ENST00000373894 WDR17Q8IZU2 1322 aa16.97■□□□□ 0.31
SMPDL3B-202ENST00000373894 MRE11P49959 708 aa16.97■□□□□ 0.31
SMPDL3B-202ENST00000373894 PARP4Q9UKK3 1724 aaKnown RBP16.96■□□□□ 0.31
SMPDL3B-202ENST00000373894 CHL1O00533 1208 aa16.96■□□□□ 0.31
SMPDL3B-202ENST00000373894 TPM2P07951 284 aa16.96■□□□□ 0.31
SMPDL3B-202ENST00000373894 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3B-202ENST00000373894 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
SMPDL3B-202ENST00000373894 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
SMPDL3B-202ENST00000373894 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
SMPDL3B-202ENST00000373894 MCM4P33991 863 aa16.94■□□□□ 0.3
SMPDL3B-202ENST00000373894 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms