RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
HDAC8-209ENST00000373589 TNNQ9UQP3 1299 aa20.18■□□□□ 0.82
HDAC8-209ENST00000373589 ANKRD24Q8TF21 1146 aa20.17■□□□□ 0.82
HDAC8-209ENST00000373589 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
HDAC8-209ENST00000373589 SOS2Q07890 1332 aaPredicted RBP20.16■□□□□ 0.82
HDAC8-209ENST00000373589 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
HDAC8-209ENST00000373589 LRRC59Q96AG4 307 aaKnown RBP20.16■□□□□ 0.82
HDAC8-209ENST00000373589 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
HDAC8-209ENST00000373589 CAMTA1Q9Y6Y1 1673 aa20.16■□□□□ 0.82
HDAC8-209ENST00000373589 KIF16BQ96L93 1317 aa20.16■□□□□ 0.82
HDAC8-209ENST00000373589 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
HDAC8-209ENST00000373589 ZC3H6P61129 1189 aaKnown RBP20.16■□□□□ 0.82
HDAC8-209ENST00000373589 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
HDAC8-209ENST00000373589 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
HDAC8-209ENST00000373589 MS4A1P11836 297 aa20.15■□□□□ 0.82
HDAC8-209ENST00000373589 TWISTNBQ3B726 338 aaPredicted RBP20.15■□□□□ 0.82
HDAC8-209ENST00000373589 RGPD2P0DJD1 1756 aa20.15■□□□□ 0.82
HDAC8-209ENST00000373589 LRRC37A3O60309 1634 aa20.15■□□□□ 0.82
HDAC8-209ENST00000373589 AAMPQ13685 434 aa20.14■□□□□ 0.81
HDAC8-209ENST00000373589 ATF7IPQ6VMQ6 1270 aa20.14■□□□□ 0.81
HDAC8-209ENST00000373589 NOB1Q9ULX3 412 aaKnown RBP20.14■□□□□ 0.81
HDAC8-209ENST00000373589 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
HDAC8-209ENST00000373589 ERBB3P21860 1342 aa20.14■□□□□ 0.81
HDAC8-209ENST00000373589 TRIM27P14373 513 aa20.13■□□□□ 0.81
HDAC8-209ENST00000373589 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
HDAC8-209ENST00000373589 ABCC6O95255 1503 aa20.13■□□□□ 0.81
HDAC8-209ENST00000373589 COL18A1P39060 1754 aa20.13■□□□□ 0.81
HDAC8-209ENST00000373589 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
HDAC8-209ENST00000373589 CPDO75976 1380 aa20.12■□□□□ 0.81
HDAC8-209ENST00000373589 IPO8O15397 1037 aaKnown RBP20.12■□□□□ 0.81
HDAC8-209ENST00000373589 MRPL50Q8N5N7 158 aaKnown RBP20.12■□□□□ 0.81
HDAC8-209ENST00000373589 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
HDAC8-209ENST00000373589 LMO7Q8WWI1 1683 aa20.11■□□□□ 0.81
HDAC8-209ENST00000373589 ELL2O00472 640 aaPredicted RBP20.11■□□□□ 0.81
HDAC8-209ENST00000373589 MVPQ14764 893 aaKnown RBP20.11■□□□□ 0.81
HDAC8-209ENST00000373589 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
HDAC8-209ENST00000373589 CENPQQ7L2Z9 268 aaPredicted RBP20.1■□□□□ 0.81
HDAC8-209ENST00000373589 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
HDAC8-209ENST00000373589 RGPD5Q99666 1765 aa20.1■□□□□ 0.81
HDAC8-209ENST00000373589 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
HDAC8-209ENST00000373589 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
HDAC8-209ENST00000373589 AMOTQ4VCS5 1084 aa20.08■□□□□ 0.81
HDAC8-209ENST00000373589 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.81
HDAC8-209ENST00000373589 KRT24Q2M2I5 525 aa20.07■□□□□ 0.8
HDAC8-209ENST00000373589 PLEKHO1Q53GL0 409 aaPredicted RBP20.07■□□□□ 0.8
HDAC8-209ENST00000373589 BABAM1Q9NWV8 329 aa20.07■□□□□ 0.8
HDAC8-209ENST00000373589 TSPYL4Q9UJ04 414 aa20.07■□□□□ 0.8
HDAC8-209ENST00000373589 NHSL1Q5SYE7 1610 aa20.07■□□□□ 0.8
HDAC8-209ENST00000373589 MIS18AQ9NYP9 233 aa20.07■□□□□ 0.8
HDAC8-209ENST00000373589 AKAP4Q5JQC9 854 aa20.05■□□□□ 0.8
HDAC8-209ENST00000373589 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
HDAC8-209ENST00000373589 CHRNA2Q15822 529 aa20.04■□□□□ 0.8
HDAC8-209ENST00000373589 ZNF530Q6P9A1 599 aaPredicted RBP20.04■□□□□ 0.8
HDAC8-209ENST00000373589 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
HDAC8-209ENST00000373589 DDX19BQ9UMR2 479 aa20.04■□□□□ 0.8
HDAC8-209ENST00000373589 FAM208AQ9UK61 1670 aaKnown RBP20.03■□□□□ 0.8
HDAC8-209ENST00000373589 LTBP4Q8N2S1 1624 aa20.03■□□□□ 0.8
HDAC8-209ENST00000373589 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
HDAC8-209ENST00000373589 IGHDP01880 384 aa20.02■□□□□ 0.8
HDAC8-209ENST00000373589 PCDHB15Q9Y5E8 787 aa20.02■□□□□ 0.8
HDAC8-209ENST00000373589 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.79
HDAC8-209ENST00000373589 LGR6Q9HBX8 967 aa20.02■□□□□ 0.79
HDAC8-209ENST00000373589 NLRP2Q9NX02 1062 aa20.02■□□□□ 0.79
HDAC8-209ENST00000373589 PLEKHG2Q9H7P9 1386 aa20.01■□□□□ 0.79
HDAC8-209ENST00000373589 ABCC4O15439 1325 aa20■□□□□ 0.79
HDAC8-209ENST00000373589 OVOS2A0A0G2JMS6 1433 aa20■□□□□ 0.79
HDAC8-209ENST00000373589 ABCA3Q99758 1704 aa20■□□□□ 0.79
HDAC8-209ENST00000373589 API5Q9BZZ5 524 aaKnown RBP19.99■□□□□ 0.79
HDAC8-209ENST00000373589 RBM19Q9Y4C8 960 aaKnown RBP19.99■□□□□ 0.79
HDAC8-209ENST00000373589 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
HDAC8-209ENST00000373589 C1orf141Q5JVX7 400 aa19.99■□□□□ 0.79
HDAC8-209ENST00000373589 CSB-PGBD3P0DP91 1061 aa19.98■□□□□ 0.79
HDAC8-209ENST00000373589 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
HDAC8-209ENST00000373589 PRDM11Q9NQV5 511 aa19.98■□□□□ 0.79
HDAC8-209ENST00000373589 ZBTB40Q9NUA8 1239 aa19.98■□□□□ 0.79
HDAC8-209ENST00000373589 RNMTO43148 476 aaKnown RBP19.97■□□□□ 0.79
HDAC8-209ENST00000373589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.97■□□□□ 0.795e-6■■□□□ 11.8
HDAC8-209ENST00000373589 MEGF6O75095 1541 aa19.97■□□□□ 0.79
HDAC8-209ENST00000373589 MPRIPQ6WCQ1 1025 aa19.96■□□□□ 0.79
HDAC8-209ENST00000373589 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
HDAC8-209ENST00000373589 TATP17735 454 aaPredicted RBP19.96■□□□□ 0.79
HDAC8-209ENST00000373589 RGS12O14924 1447 aa19.95■□□□□ 0.78
HDAC8-209ENST00000373589 SKAP1Q86WV1 359 aa19.95■□□□□ 0.78
HDAC8-209ENST00000373589 PTPRCP08575 1304 aa19.94■□□□□ 0.78
HDAC8-209ENST00000373589 WDR17Q8IZU2 1322 aa19.94■□□□□ 0.78
HDAC8-209ENST00000373589 ROBO1Q9Y6N7 1651 aa19.94■□□□□ 0.78
HDAC8-209ENST00000373589 ZBTB7BO15156 539 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-209ENST00000373589 SLC4A2P04920 1241 aa19.93■□□□□ 0.78
HDAC8-209ENST00000373589 TEFQ10587 303 aa19.93■□□□□ 0.78
HDAC8-209ENST00000373589 RWDD1Q9H446 243 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-209ENST00000373589 COL5A2P05997 1499 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-209ENST00000373589 AHDC1Q5TGY3 1603 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-209ENST00000373589 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
HDAC8-209ENST00000373589 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
HDAC8-209ENST00000373589 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
HDAC8-209ENST00000373589 CHMP4BQ9H444 224 aaKnown RBP19.92■□□□□ 0.78
HDAC8-209ENST00000373589 HDAC1Q13547 482 aaPredicted RBP19.91■□□□□ 0.78
HDAC8-209ENST00000373589 CCDC30Q5VVM6 783 aa19.91■□□□□ 0.78
HDAC8-209ENST00000373589 BTBD11A6QL63 1104 aa19.9■□□□□ 0.78
HDAC8-209ENST00000373589 PHKG2P15735 406 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms