RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 NUTM2BA6NNL0 878 aaPredicted RBP13.79□□□□□ -0.2
RPRD1B-201ENST00000373433 NUTM2EB1AL46 878 aaPredicted RBP13.79□□□□□ -0.2
RPRD1B-201ENST00000373433 NFE2L2Q16236 605 aa13.79□□□□□ -0.2
RPRD1B-201ENST00000373433 NUTM2AQ8IVF1 878 aaPredicted RBP13.79□□□□□ -0.2
RPRD1B-201ENST00000373433 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
RPRD1B-201ENST00000373433 OFD1O75665 1012 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 GCP02774 474 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 AAMPQ13685 434 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 EIF4A2Q14240 407 aaKnown RBP13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 TOM1L2Q6ZVM7 507 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 STK31Q9BXU1 1019 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 SLAIN2Q9P270 581 aa13.78□□□□□ -0.2
RPRD1B-201ENST00000373433 DCTN1Q14203 1278 aa13.77□□□□□ -0.2
RPRD1B-201ENST00000373433 WDR63Q8IWG1 891 aa13.77□□□□□ -0.2
RPRD1B-201ENST00000373433 TSPYL4Q9UJ04 414 aa13.77□□□□□ -0.2
RPRD1B-201ENST00000373433 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
RPRD1B-201ENST00000373433 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.21
RPRD1B-201ENST00000373433 NECTIN2Q92692 538 aa13.77□□□□□ -0.21
RPRD1B-201ENST00000373433 ATP7BP35670 1465 aa13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 C3P01024 1663 aa13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 SSFA2P28290 1259 aa13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 ZKSCAN2Q63HK3 967 aa13.76□□□□□ -0.21
RPRD1B-201ENST00000373433 ZNF530Q6P9A1 599 aaPredicted RBP13.75□□□□□ -0.21
RPRD1B-201ENST00000373433 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
RPRD1B-201ENST00000373433 UQCRHP07919 91 aa13.75□□□□□ -0.21
RPRD1B-201ENST00000373433 LNPKQ9C0E8 428 aa13.75□□□□□ -0.21
RPRD1B-201ENST00000373433 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
RPRD1B-201ENST00000373433 PTMSP20962 102 aa13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 MCM10Q7L590 875 aa13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 CIZ1Q9ULV3 898 aaPredicted RBP13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 FLT4P35916 1363 aa13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 OS9Q13438 667 aaPredicted RBP13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 USP6P35125 1406 aa13.74□□□□□ -0.21
RPRD1B-201ENST00000373433 SLC4A10Q6U841 1118 aa13.73□□□□□ -0.21
RPRD1B-201ENST00000373433 PPP1R9BQ96SB3 815 aa13.73□□□□□ -0.21
RPRD1B-201ENST00000373433 UBAP1LF5GYI3 381 aa13.73□□□□□ -0.21
RPRD1B-201ENST00000373433 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
RPRD1B-201ENST00000373433 EIF2S2P20042 333 aaKnown RBP13.73□□□□□ -0.21
RPRD1B-201ENST00000373433 CAVIN1Q6NZI2 390 aaKnown RBP13.73□□□□□ -0.21
RPRD1B-201ENST00000373433 TOM1O60784 492 aa13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 ADAMTS2O95450 1211 aa13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 ANKRD24Q8TF21 1146 aa13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 PRDM4Q9UKN5 801 aa13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 FAM83GA6ND36 823 aa13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
RPRD1B-201ENST00000373433 CD2BP2O95400 341 aaKnown RBP13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 HOXC9P31274 260 aa13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 DDIT3P35638 169 aa13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 MCTP1Q6DN14 999 aa13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 PTCH1Q13635 1447 aa13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 SNX21Q969T3 373 aa13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 EYA1Q99502 592 aa13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 ZHX1Q9UKY1 873 aaPredicted RBP13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 TECPR2O15040 1411 aa13.71□□□□□ -0.21
RPRD1B-201ENST00000373433 IL13P35225 146 aa13.71□□□□□ -0.22
RPRD1B-201ENST00000373433 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.22
RPRD1B-201ENST00000373433 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.22
RPRD1B-201ENST00000373433 SLIT1O75093 1534 aa13.71□□□□□ -0.22
RPRD1B-201ENST00000373433 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 K7ELQ4 463 aaPredicted RBP13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 MEX3CQ5U5Q3 659 aaKnown RBP13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 CHMP4AQ9BY43 222 aa13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
RPRD1B-201ENST00000373433 GNAT3A8MTJ3 354 aa13.69□□□□□ -0.22
RPRD1B-201ENST00000373433 TWISTNBQ3B726 338 aaPredicted RBP13.69□□□□□ -0.22
RPRD1B-201ENST00000373433 DDX54Q8TDD1 881 aaKnown RBP13.69□□□□□ -0.22
RPRD1B-201ENST00000373433 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
RPRD1B-201ENST00000373433 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
RPRD1B-201ENST00000373433 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
RPRD1B-201ENST00000373433 IP6K1Q92551 441 aa13.69□□□□□ -0.22
RPRD1B-201ENST00000373433 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
RPRD1B-201ENST00000373433 DDX19BQ9UMR2 479 aa13.68□□□□□ -0.22
RPRD1B-201ENST00000373433 TRIM27P14373 513 aa13.68□□□□□ -0.22
RPRD1B-201ENST00000373433 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
RPRD1B-201ENST00000373433 MYO3AQ8NEV4 1616 aa13.67□□□□□ -0.22
RPRD1B-201ENST00000373433 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
RPRD1B-201ENST00000373433 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
RPRD1B-201ENST00000373433 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
RPRD1B-201ENST00000373433 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
RPRD1B-201ENST00000373433 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
RPRD1B-201ENST00000373433 IFT172Q9UG01 1749 aa13.66□□□□□ -0.22
RPRD1B-201ENST00000373433 PTMAP06454 111 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms