RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 WDR63Q8IWG1 891 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 TRERF1Q96PN7 1200 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 INCENPQ9NQS7 918 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 HMMRO75330 724 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 CBX1P83916 185 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 HOMER1Q86YM7 354 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 TAOK2Q9UL54 1235 aa7.93□□□□□ -1.14
CHD6-203ENST00000373233 TMEM131LA2VDJ0 1609 aa7.93□□□□□ -1.14
CHD6-203ENST00000373233 NKTRP30414 1462 aaKnown RBP7.93□□□□□ -1.14
CHD6-203ENST00000373233 OS9Q13438 667 aaPredicted RBP7.93□□□□□ -1.14
CHD6-203ENST00000373233 BLMP54132 1417 aaPredicted RBP7.93□□□□□ -1.14
CHD6-203ENST00000373233 A2ML1A8K2U0 1454 aa7.93□□□□□ -1.14
CHD6-203ENST00000373233 RUFY1Q96T51 708 aa7.93□□□□□ -1.14
CHD6-203ENST00000373233 POLR3AO14802 1390 aaPredicted RBP7.92□□□□□ -1.14
CHD6-203ENST00000373233 ST18O60284 1047 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 CARD14Q9BXL6 1004 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 ABCC11Q96J66 1382 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 FCHSD2O94868 740 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 TDO2P48775 406 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 TSR2Q969E8 191 aaKnown RBP7.92□□□□□ -1.14
CHD6-203ENST00000373233 PLEKHG1Q9ULL1 1385 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 COG6Q9Y2V7 657 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 ZSCAN30Q86W11 494 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 PANK1Q8TE04 598 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 XPCQ01831 940 aaPredicted RBP7.92□□□□□ -1.14
CHD6-203ENST00000373233 GRPEL1Q9HAV7 217 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 PHF8Q9UPP1 1060 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 MAP2P11137 1827 aaKnown RBP7.92□□□□□ -1.14
CHD6-203ENST00000373233 SULT6B1Q6IMI4 303 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
CHD6-203ENST00000373233 DZIP1LQ8IYY4 767 aaKnown RBP7.92□□□□□ -1.14
CHD6-203ENST00000373233 CHMP5Q9NZZ3 219 aa7.92□□□□□ -1.14
CHD6-203ENST00000373233 EDC4Q6P2E9 1401 aaKnown RBP7.91□□□□□ -1.14
CHD6-203ENST00000373233 NCBP3Q53F19 620 aaKnown RBP7.91□□□□□ -1.14
CHD6-203ENST00000373233 TTLL5Q6EMB2 1281 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 SASS6Q6UVJ0 657 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 PLEKHH1Q9ULM0 1364 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 EMILIN1Q9Y6C2 1016 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 TSPYL4Q9UJ04 414 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 TMPOP42166 694 aaKnown RBP7.91□□□□□ -1.14
CHD6-203ENST00000373233 SLFN5Q08AF3 891 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 ELL2O00472 640 aaPredicted RBP7.91□□□□□ -1.14
CHD6-203ENST00000373233 GAS2L2Q8NHY3 880 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 NLRP2Q9NX02 1062 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 ACEP12821 1306 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 CCDC112Q8NEF3 446 aa7.91□□□□□ -1.14
CHD6-203ENST00000373233 GTPBP4Q9BZE4 634 aaKnown RBP7.91□□□□□ -1.14
CHD6-203ENST00000373233 PES1O00541 588 aaKnown RBP7.9□□□□□ -1.14
CHD6-203ENST00000373233 NFE2L2Q16236 605 aa7.9□□□□□ -1.14
CHD6-203ENST00000373233 GOLGA6L19H0YKK7 550 aa7.9□□□□□ -1.14
CHD6-203ENST00000373233 PPP4R3BQ5MIZ7 849 aa7.9□□□□□ -1.14
CHD6-203ENST00000373233 NOL8Q76FK4 1167 aaKnown RBP7.9□□□□□ -1.14
CHD6-203ENST00000373233 NRXN1Q9ULB1 1477 aa7.9□□□□□ -1.14
CHD6-203ENST00000373233 CT47A1Q5JQC4 288 aaPredicted RBP7.9□□□□□ -1.14
CHD6-203ENST00000373233 TTC21BQ7Z4L5 1316 aa7.9□□□□□ -1.14
CHD6-203ENST00000373233 CT47B1P0C2W7 299 aaPredicted RBP7.9□□□□□ -1.15
CHD6-203ENST00000373233 DYNC1I1O14576 645 aa7.9□□□□□ -1.15
CHD6-203ENST00000373233 FYB1O15117 783 aa7.9□□□□□ -1.15
CHD6-203ENST00000373233 SLC4A10Q6U841 1118 aa7.9□□□□□ -1.15
CHD6-203ENST00000373233 MYO3AQ8NEV4 1616 aa7.9□□□□□ -1.15
CHD6-203ENST00000373233 TEFQ10587 303 aa7.9□□□□□ -1.15
CHD6-203ENST00000373233 APBB1O00213 710 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 METP08581 1390 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 KLHL34Q8N239 644 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 TTC21AQ8NDW8 1320 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 DDX19BQ9UMR2 479 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 EVA1CP58658 441 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 ATP6V1DQ9Y5K8 247 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 REREQ9P2R6 1566 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 LTKP29376 864 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 FAM193AP78312 1265 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 CCDC94Q9BW85 323 aaPredicted RBP7.89□□□□□ -1.15
CHD6-203ENST00000373233 TPD52L1Q16890 204 aaPredicted RBP7.89□□□□□ -1.15
CHD6-203ENST00000373233 ATP7BP35670 1465 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 DDX11Q96FC9 970 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 TRAK2O60296 914 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 EXOSC9Q06265 439 aaKnown RBP7.89□□□□□ -1.15
CHD6-203ENST00000373233 SMAP1Q8IYB5 467 aaPredicted RBP7.89□□□□□ -1.15
CHD6-203ENST00000373233 BECN2A8MW95 431 aa7.89□□□□□ -1.15
CHD6-203ENST00000373233 RBM33Q96EV2 1170 aaKnown RBP7.89□□□□□ -1.15
CHD6-203ENST00000373233 API5Q9BZZ5 524 aaKnown RBP7.89□□□□□ -1.15
CHD6-203ENST00000373233 AAMPQ13685 434 aa7.88□□□□□ -1.15
CHD6-203ENST00000373233 HDAC5Q9UQL6 1122 aa7.88□□□□□ -1.15
CHD6-203ENST00000373233 SPATA31D1Q6ZQQ2 1576 aa7.88□□□□□ -1.15
CHD6-203ENST00000373233 NCKAP5LQ9HCH0 1330 aa7.88□□□□□ -1.15
CHD6-203ENST00000373233 TBX22Q9Y458 520 aa7.88□□□□□ -1.15
CHD6-203ENST00000373233 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.87□□□□□ -1.15
CHD6-203ENST00000373233 ZFP91Q96JP5 570 aaPredicted RBP7.87□□□□□ -1.15
CHD6-203ENST00000373233 DLC1Q96QB1 1528 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 ERCC4Q92889 916 aaPredicted RBP7.87□□□□□ -1.15
CHD6-203ENST00000373233 INSRP06213 1382 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 PLEKHO1Q53GL0 409 aaPredicted RBP7.87□□□□□ -1.15
CHD6-203ENST00000373233 MYOM1P52179 1685 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 BCAR3O75815 825 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 RAPGEF4Q8WZA2 1011 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 GTF2F1P35269 517 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHD6-203ENST00000373233 NECTIN2Q92692 538 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 TULP4Q9NRJ4 1543 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 FAM135BQ49AJ0 1406 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 ZNF530Q6P9A1 599 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms