RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
TRERF1-203ENST00000372917 CCDC189A1A4V9 331 aa12.73□□□□□ -0.37
TRERF1-203ENST00000372917 PPP1R12AO14974 1030 aaPredicted RBP12.73□□□□□ -0.37
TRERF1-203ENST00000372917 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
TRERF1-203ENST00000372917 TPM4P67936 248 aa12.73□□□□□ -0.37
TRERF1-203ENST00000372917 NBPF9Q3BBW0 867 aa12.72□□□□□ -0.37
TRERF1-203ENST00000372917 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
TRERF1-203ENST00000372917 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
TRERF1-203ENST00000372917 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
TRERF1-203ENST00000372917 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
TRERF1-203ENST00000372917 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
TRERF1-203ENST00000372917 NBPF11Q86T75 865 aa12.72□□□□□ -0.37
TRERF1-203ENST00000372917 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
TRERF1-203ENST00000372917 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
TRERF1-203ENST00000372917 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
TRERF1-203ENST00000372917 TROQ12816 1431 aaPredicted RBP12.72□□□□□ -0.37
TRERF1-203ENST00000372917 ST5P78524 1137 aa12.71□□□□□ -0.37
TRERF1-203ENST00000372917 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.37
TRERF1-203ENST00000372917 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.37
TRERF1-203ENST00000372917 MBD3O95983 291 aa12.71□□□□□ -0.37
TRERF1-203ENST00000372917 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.37
TRERF1-203ENST00000372917 ZNF215Q9UL58 517 aaPredicted RBP12.71□□□□□ -0.37
TRERF1-203ENST00000372917 AK9Q5TCS8 1911 aa12.71□□□□□ -0.37
TRERF1-203ENST00000372917 MCTP2Q6DN12 878 aa12.71□□□□□ -0.38
TRERF1-203ENST00000372917 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.38
TRERF1-203ENST00000372917 SMARCE1Q969G3 411 aa12.71□□□□□ -0.38
TRERF1-203ENST00000372917 TTC36A6NLP5 189 aa12.7□□□□□ -0.38
TRERF1-203ENST00000372917 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
TRERF1-203ENST00000372917 DRC7Q8IY82 874 aa12.7□□□□□ -0.38
TRERF1-203ENST00000372917 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
TRERF1-203ENST00000372917 PAXBP1Q9Y5B6 917 aa12.7□□□□□ -0.38
TRERF1-203ENST00000372917 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
TRERF1-203ENST00000372917 HCLS1P14317 486 aaPredicted RBP12.69□□□□□ -0.38
TRERF1-203ENST00000372917 NBPF6Q5VWK0 638 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 TTC19Q6DKK2 380 aaPredicted RBP12.69□□□□□ -0.38
TRERF1-203ENST00000372917 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
TRERF1-203ENST00000372917 NBPF4Q96M43 638 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 LMAN1P49257 510 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 MNAT1P51948 309 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 ZMYM4Q5VZL5 1548 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
TRERF1-203ENST00000372917 MAGEA9P43362 315 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
TRERF1-203ENST00000372917 ANKRD65E5RJM6 399 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 APAF1O14727 1248 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
TRERF1-203ENST00000372917 UVSSAQ2YD98 709 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 TPM3P06753 285 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 ANAPC15P60006 121 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
TRERF1-203ENST00000372917 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
TRERF1-203ENST00000372917 SCP2P22307 547 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 SLFN5Q08AF3 891 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 AK7Q96M32 723 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 NEBLO76041 1014 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 PTGS1P23219 599 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 CT47B1P0C2W7 299 aaPredicted RBP12.67□□□□□ -0.38
TRERF1-203ENST00000372917 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
TRERF1-203ENST00000372917 GSCP56915 257 aaPredicted RBP12.67□□□□□ -0.38
TRERF1-203ENST00000372917 ZCCHC17Q9NP64 241 aaKnown RBP12.67□□□□□ -0.38
TRERF1-203ENST00000372917 ERBINQ96RT1 1412 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 ADGBQ8N7X0 1667 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 FBXO18Q8NFZ0 1043 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 ITSN2Q9NZM3 1697 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 EXOC6BQ9Y2D4 811 aa12.66□□□□□ -0.38
TRERF1-203ENST00000372917 GOLGA5Q8TBA6 731 aa12.65□□□□□ -0.38
TRERF1-203ENST00000372917 FAM53CQ9NYF3 392 aa12.65□□□□□ -0.38
TRERF1-203ENST00000372917 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
TRERF1-203ENST00000372917 KDM4AO75164 1064 aa12.65□□□□□ -0.38
TRERF1-203ENST00000372917 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.39
TRERF1-203ENST00000372917 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.39
TRERF1-203ENST00000372917 NAIF1Q69YI7 327 aaPredicted RBP12.64□□□□□ -0.39
TRERF1-203ENST00000372917 MMS22LQ6ZRQ5 1243 aa12.64□□□□□ -0.39
TRERF1-203ENST00000372917 GIMAP7Q8NHV1 300 aa12.64□□□□□ -0.39
TRERF1-203ENST00000372917 NUP153P49790 1475 aaKnown RBP12.64□□□□□ -0.39
TRERF1-203ENST00000372917 GPATCH8Q9UKJ3 1502 aaKnown RBP12.64□□□□□ -0.39
TRERF1-203ENST00000372917 MAP9Q49MG5 647 aa12.64□□□□□ -0.39
TRERF1-203ENST00000372917 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
TRERF1-203ENST00000372917 EIF3CLB5ME19 914 aaKnown RBP12.64□□□□□ -0.39
TRERF1-203ENST00000372917 PNMA6AP0CW24 399 aaPredicted RBP12.64□□□□□ -0.39
TRERF1-203ENST00000372917 LIG1P18858 919 aa12.64□□□□□ -0.39
TRERF1-203ENST00000372917 EIF3CQ99613 913 aaKnown RBP12.64□□□□□ -0.39
TRERF1-203ENST00000372917 TPM1P09493 284 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 PLA2G4AP47712 749 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 LRMPQ12912 555 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRERF1-203ENST00000372917 OTUD6BQ8N6M0 293 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 IRAK4Q9NWZ3 460 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms