RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 HDAC1Q13547 482 aaPredicted RBP30.15■■■□□ 2.42
SNX21-204ENST00000372542 ZBTB40Q9NUA8 1239 aa30.15■■■□□ 2.42
SNX21-204ENST00000372542 DCCP43146 1447 aa30.14■■■□□ 2.42
SNX21-204ENST00000372542 API5Q9BZZ5 524 aaKnown RBP30.14■■■□□ 2.42
SNX21-204ENST00000372542 LRRC37A3O60309 1634 aa30.13■■■□□ 2.41
SNX21-204ENST00000372542 FOXO3O43524 673 aa30.12■■■□□ 2.41
SNX21-204ENST00000372542 IPO9Q96P70 1041 aaKnown RBP30.11■■■□□ 2.41
SNX21-204ENST00000372542 ABCC4O15439 1325 aa30.11■■■□□ 2.41
SNX21-204ENST00000372542 MST1RQ04912 1400 aa30.11■■■□□ 2.41
SNX21-204ENST00000372542 GNAT3A8MTJ3 354 aa30.09■■■□□ 2.41
SNX21-204ENST00000372542 LTV1Q96GA3 475 aaPredicted RBP30.09■■■□□ 2.41
SNX21-204ENST00000372542 C8orf34Q49A92 452 aa30.08■■■□□ 2.41
SNX21-204ENST00000372542 USP19O94966 1318 aa30.08■■■□□ 2.41
SNX21-204ENST00000372542 KRT28Q7Z3Y7 464 aa30.08■■■□□ 2.41
SNX21-204ENST00000372542 STRCP1A6NGW2 1772 aa30.07■■■□□ 2.4
SNX21-204ENST00000372542 ERICH6Q7L0X2 663 aa30.07■■■□□ 2.4
SNX21-204ENST00000372542 PDZRN3Q9UPQ7 1066 aa30.07■■■□□ 2.4
SNX21-204ENST00000372542 VIRMAQ69YN4 1812 aaKnown RBP30.07■■■□□ 2.4
SNX21-204ENST00000372542 TMEM94Q12767 1356 aa30.07■■■□□ 2.4
SNX21-204ENST00000372542 MAP3K5Q99683 1374 aa30.07■■■□□ 2.4
SNX21-204ENST00000372542 ATF3P18847 181 aa30.06■■■□□ 2.4
SNX21-204ENST00000372542 GCP02774 474 aa30.06■■■□□ 2.4
SNX21-204ENST00000372542 ANP32EQ9BTT0 268 aa30.06■■■□□ 2.4
SNX21-204ENST00000372542 TSPYL4Q9UJ04 414 aa30.06■■■□□ 2.4
SNX21-204ENST00000372542 BABAM1Q9NWV8 329 aa30.05■■■□□ 2.4
SNX21-204ENST00000372542 ARHGEF25Q86VW2 580 aa30.03■■■□□ 2.4
SNX21-204ENST00000372542 ZBTB7BO15156 539 aaPredicted RBP30.03■■■□□ 2.4
SNX21-204ENST00000372542 MSH6P52701 1360 aa30.02■■■□□ 2.4
SNX21-204ENST00000372542 ALS2Q96Q42 1657 aa30.02■■■□□ 2.4
SNX21-204ENST00000372542 XPCQ01831 940 aaPredicted RBP30.01■■■□□ 2.4
SNX21-204ENST00000372542 NOP58Q9Y2X3 529 aaKnown RBP30.01■■■□□ 2.4
SNX21-204ENST00000372542 PTPRCP08575 1304 aa30.01■■■□□ 2.39
SNX21-204ENST00000372542 NPM2Q86SE8 214 aaKnown RBP30.01■■■□□ 2.39
SNX21-204ENST00000372542 SMC5Q8IY18 1101 aa30.01■■■□□ 2.39
SNX21-204ENST00000372542 SOS1Q07889 1333 aaPredicted RBP30■■■□□ 2.39
SNX21-204ENST00000372542 NCAPD2Q15021 1401 aa29.99■■■□□ 2.39
SNX21-204ENST00000372542 KRT24Q2M2I5 525 aa29.99■■■□□ 2.39
SNX21-204ENST00000372542 NBPF6Q5VWK0 638 aa29.99■■■□□ 2.39
SNX21-204ENST00000372542 NBPF4Q96M43 638 aa29.99■■■□□ 2.39
SNX21-204ENST00000372542 CADPS2Q86UW7 1296 aa29.98■■■□□ 2.39
SNX21-204ENST00000372542 LMOD2Q6P5Q4 547 aa29.97■■■□□ 2.39
SNX21-204ENST00000372542 USHBP1Q8N6Y0 703 aa29.96■■■□□ 2.39
SNX21-204ENST00000372542 ZBTB7CA1YPR0 619 aa29.96■■■□□ 2.39
SNX21-204ENST00000372542 INTS3Q68E01 1043 aaKnown RBP29.96■■■□□ 2.39
SNX21-204ENST00000372542 CAMTA1Q9Y6Y1 1673 aa29.95■■■□□ 2.39
SNX21-204ENST00000372542 MIS18AQ9NYP9 233 aa29.95■■■□□ 2.39
SNX21-204ENST00000372542 ZBTB47Q9UFB7 747 aaPredicted RBP29.95■■■□□ 2.39
SNX21-204ENST00000372542 RGPD2P0DJD1 1756 aa29.95■■■□□ 2.38
SNX21-204ENST00000372542 IL17REQ8NFR9 667 aa29.94■■■□□ 2.38
SNX21-204ENST00000372542 TAF7Q15545 349 aaPredicted RBP29.94■■■□□ 2.38
SNX21-204ENST00000372542 DDRGK1Q96HY6 314 aa29.94■■■□□ 2.38
SNX21-204ENST00000372542 RGS12O14924 1447 aa29.93■■■□□ 2.38
SNX21-204ENST00000372542 HSPA2P54652 639 aa29.92■■■□□ 2.38
SNX21-204ENST00000372542 LMO7Q8WWI1 1683 aa29.91■■■□□ 2.38
SNX21-204ENST00000372542 CEMIPQ8WUJ3 1361 aa29.91■■■□□ 2.38
SNX21-204ENST00000372542 NPHP3Q7Z494 1330 aa29.9■■■□□ 2.38
SNX21-204ENST00000372542 AMOTQ4VCS5 1084 aa29.9■■■□□ 2.38
SNX21-204ENST00000372542 PLEKHO1Q53GL0 409 aaPredicted RBP29.9■■■□□ 2.38
SNX21-204ENST00000372542 MED1Q15648 1581 aaPredicted RBP29.9■■■□□ 2.38
SNX21-204ENST00000372542 ANKRD24Q8TF21 1146 aa29.89■■■□□ 2.38
SNX21-204ENST00000372542 GCC1Q96CN9 775 aa29.89■■■□□ 2.38
SNX21-204ENST00000372542 SLC4A2P04920 1241 aa29.89■■■□□ 2.38
SNX21-204ENST00000372542 CACNA1FO60840 1977 aa29.88■■■□□ 2.37
SNX21-204ENST00000372542 LRRC59Q96AG4 307 aaKnown RBP29.87■■■□□ 2.37
SNX21-204ENST00000372542 NUCB1Q02818 461 aa29.87■■■□□ 2.37
SNX21-204ENST00000372542 AKAP4Q5JQC9 854 aa29.87■■■□□ 2.37
SNX21-204ENST00000372542 STK31Q9BXU1 1019 aa29.87■■■□□ 2.37
SNX21-204ENST00000372542 LMTK3Q96Q04 1460 aa29.86■■■□□ 2.37
SNX21-204ENST00000372542 FAM208AQ9UK61 1670 aaKnown RBP29.86■■■□□ 2.37
SNX21-204ENST00000372542 CCDC30Q5VVM6 783 aa29.86■■■□□ 2.37
SNX21-204ENST00000372542 OVOS2A0A0G2JMS6 1433 aa29.84■■■□□ 2.37
SNX21-204ENST00000372542 XIRP1Q702N8 1843 aaKnown RBP29.84■■■□□ 2.37
SNX21-204ENST00000372542 ABCC6O95255 1503 aa29.84■■■□□ 2.37
SNX21-204ENST00000372542 TNS3Q68CZ2 1445 aa29.84■■■□□ 2.37
SNX21-204ENST00000372542 STRCQ7RTU9 1775 aa29.83■■■□□ 2.37
SNX21-204ENST00000372542 ZNF530Q6P9A1 599 aaPredicted RBP29.82■■■□□ 2.36
SNX21-204ENST00000372542 C1orf115Q9H7X2 142 aa29.82■■■□□ 2.36
SNX21-204ENST00000372542 CHMP4AQ9BY43 222 aa29.81■■■□□ 2.36
SNX21-204ENST00000372542 RGPD5Q99666 1765 aa29.81■■■□□ 2.36
SNX21-204ENST00000372542 KDM3BQ7LBC6 1761 aa29.8■■■□□ 2.36
SNX21-204ENST00000372542 AXIN2Q9Y2T1 843 aa29.8■■■□□ 2.36
SNX21-204ENST00000372542 PXDNQ92626 1479 aa29.8■■■□□ 2.36
SNX21-204ENST00000372542 CHD1LQ86WJ1 897 aa29.8■■■□□ 2.36
SNX21-204ENST00000372542 ERBB3P21860 1342 aa29.79■■■□□ 2.36
SNX21-204ENST00000372542 PLEKHG5O94827 1062 aa29.79■■■□□ 2.36
SNX21-204ENST00000372542 CCT4P50991 539 aaKnown RBP29.79■■■□□ 2.36
SNX21-204ENST00000372542 C1orf141Q5JVX7 400 aa29.78■■■□□ 2.36
SNX21-204ENST00000372542 SIRT2Q8IXJ6 389 aa29.78■■■□□ 2.36
SNX21-204ENST00000372542 KDM4FA0A1W2PPD8 638 aa29.78■■■□□ 2.36
SNX21-204ENST00000372542 HOXB7P09629 217 aa29.78■■■□□ 2.36
SNX21-204ENST00000372542 RPAP2Q8IXW5 612 aaPredicted RBP29.77■■■□□ 2.36
SNX21-204ENST00000372542 ZC3H6P61129 1189 aaKnown RBP29.76■■■□□ 2.35
SNX21-204ENST00000372542 SPATA31A3Q5VYP0 1347 aa29.76■■■□□ 2.35
SNX21-204ENST00000372542 COL18A1P39060 1754 aa29.76■■■□□ 2.35
SNX21-204ENST00000372542 TEFQ10587 303 aa29.75■■■□□ 2.35
SNX21-204ENST00000372542 G2E3Q7L622 706 aa29.75■■■□□ 2.35
SNX21-204ENST00000372542 CRYBG1Q9Y4K1 1723 aa29.75■■■□□ 2.35
SNX21-204ENST00000372542 PLEKHG2Q9H7P9 1386 aa29.75■■■□□ 2.35
SNX21-204ENST00000372542 LGR6Q9HBX8 967 aa29.75■■■□□ 2.35
SNX21-204ENST00000372542 MYT1Q01538 1121 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms