RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 ZCRB1Q8TBF4 217 aaKnown RBP33.93■■■■□ 3.02
C9orf50-201ENST00000372478 DDX54Q8TDD1 881 aaKnown RBP33.93■■■■□ 3.02
C9orf50-201ENST00000372478 SULT6B1Q6IMI4 303 aa33.92■■■■□ 3.02
C9orf50-201ENST00000372478 PKD1L3Q7Z443 1732 aa33.9■■■■□ 3.02
C9orf50-201ENST00000372478 DIEXFQ68CQ4 756 aaKnown RBP33.9■■■■□ 3.02
C9orf50-201ENST00000372478 PRKRIP1Q9H875 184 aaPredicted RBP33.89■■■■□ 3.02
C9orf50-201ENST00000372478 SBF2Q86WG5 1849 aa33.89■■■■□ 3.02
C9orf50-201ENST00000372478 U2SURPO15042 1029 aaKnown RBP33.88■■■■□ 3.01
C9orf50-201ENST00000372478 TRIM37O94972 964 aa33.86■■■■□ 3.01
C9orf50-201ENST00000372478 HMOX1P09601 288 aa33.86■■■■□ 3.01
C9orf50-201ENST00000372478 MYBBP1AQ9BQG0 1328 aaKnown RBP33.86■■■■□ 3.01
C9orf50-201ENST00000372478 KDRP35968 1356 aa33.86■■■■□ 3.01
C9orf50-201ENST00000372478 TNS1Q9HBL0 1735 aaKnown RBP33.84■■■■□ 3.01
C9orf50-201ENST00000372478 CCDC125Q86Z20 511 aa33.82■■■■□ 3.01
C9orf50-201ENST00000372478 KAT6BQ8WYB5 2073 aa33.82■■■■□ 3
C9orf50-201ENST00000372478 SPG7Q9UQ90 795 aa33.82■■■■□ 3
C9orf50-201ENST00000372478 PCDH11XQ9BZA7 1347 aa33.82■■■■□ 3
C9orf50-201ENST00000372478 PCDH11YQ9BZA8 1340 aa33.82■■■■□ 3
C9orf50-201ENST00000372478 BCL9O00512 1426 aa33.82■■■■□ 3
C9orf50-201ENST00000372478 NUDCQ9Y266 331 aa33.8■■■■□ 3
C9orf50-201ENST00000372478 CYP27B1O15528 508 aa33.79■■■■□ 3
C9orf50-201ENST00000372478 SF3B2Q13435 895 aaKnown RBP33.79■■■■□ 3
C9orf50-201ENST00000372478 ACSBG1Q96GR2 724 aa33.79■■■■□ 3
C9orf50-201ENST00000372478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.79■■■■□ 3
C9orf50-201ENST00000372478 PTF1AQ7RTS3 328 aa33.78■■■■□ 3
C9orf50-201ENST00000372478 DOT1LQ8TEK3 1739 aa33.76■■■■□ 3
C9orf50-201ENST00000372478 PLEKHG2Q9H7P9 1386 aa33.75■■■□□ 2.99
C9orf50-201ENST00000372478 NHSQ6T4R5 1651 aa33.75■■■□□ 2.99
C9orf50-201ENST00000372478 U2AF1L5P0DN76 240 aaPredicted RBP33.75■■■□□ 2.99
C9orf50-201ENST00000372478 U2AF1Q01081 240 aaKnown RBP eCLIP33.75■■■□□ 2.99
C9orf50-201ENST00000372478 PLEKHO1Q53GL0 409 aaPredicted RBP33.75■■■□□ 2.99
C9orf50-201ENST00000372478 DEFB132Q7Z7B7 95 aa33.75■■■□□ 2.99
C9orf50-201ENST00000372478 KCNQ2O43526 872 aa33.74■■■□□ 2.99
C9orf50-201ENST00000372478 AMOTQ4VCS5 1084 aa33.71■■■□□ 2.99
C9orf50-201ENST00000372478 APBA3O96018 575 aa33.71■■■□□ 2.99
C9orf50-201ENST00000372478 ZNF530Q6P9A1 599 aaPredicted RBP33.71■■■□□ 2.99
C9orf50-201ENST00000372478 BCL11BQ9C0K0 894 aaPredicted RBP33.71■■■□□ 2.99
C9orf50-201ENST00000372478 ANP32CO43423 234 aa33.7■■■□□ 2.99
C9orf50-201ENST00000372478 PHKG2P15735 406 aa33.7■■■□□ 2.99
C9orf50-201ENST00000372478 IFNL2Q8IZJ0 200 aa33.7■■■□□ 2.99
C9orf50-201ENST00000372478 TOGARAM1Q9Y4F4 1720 aa33.69■■■□□ 2.98
C9orf50-201ENST00000372478 BAG6P46379 1132 aa33.68■■■□□ 2.98
C9orf50-201ENST00000372478 RSPH6AQ9H0K4 717 aa33.68■■■□□ 2.98
C9orf50-201ENST00000372478 PRKAR2BP31323 418 aa33.67■■■□□ 2.98
C9orf50-201ENST00000372478 EN1Q05925 392 aaPredicted RBP33.67■■■□□ 2.98
C9orf50-201ENST00000372478 SYTL4Q96C24 671 aaPredicted RBP33.67■■■□□ 2.98
C9orf50-201ENST00000372478 BTAF1O14981 1849 aa33.66■■■□□ 2.98
C9orf50-201ENST00000372478 PRIM1P49642 420 aaKnown RBP33.66■■■□□ 2.98
C9orf50-201ENST00000372478 NKX1-1Q15270 411 aaPredicted RBP33.65■■■□□ 2.98
C9orf50-201ENST00000372478 ITGB4P16144 1822 aa33.63■■■□□ 2.97
C9orf50-201ENST00000372478 MTHFSDQ2M296 383 aaKnown RBP33.63■■■□□ 2.97
C9orf50-201ENST00000372478 C1orf141Q5JVX7 400 aa33.63■■■□□ 2.97
C9orf50-201ENST00000372478 FCHSD2O94868 740 aa33.61■■■□□ 2.97
C9orf50-201ENST00000372478 PHACTR3Q96KR7 559 aa33.61■■■□□ 2.97
C9orf50-201ENST00000372478 EZH2Q15910 746 aaKnown RBP33.59■■■□□ 2.97
C9orf50-201ENST00000372478 HSP90AB1P08238 724 aaKnown RBP33.57■■■□□ 2.97
C9orf50-201ENST00000372478 CCDC184Q52MB2 194 aa33.57■■■□□ 2.97
C9orf50-201ENST00000372478 CAMKK2Q96RR4 588 aa33.57■■■□□ 2.97
C9orf50-201ENST00000372478 KDM6AO15550 1401 aaPredicted RBP33.57■■■□□ 2.96
C9orf50-201ENST00000372478 MPRIPQ6WCQ1 1025 aa33.57■■■□□ 2.96
C9orf50-201ENST00000372478 AKAP4Q5JQC9 854 aa33.56■■■□□ 2.96
C9orf50-201ENST00000372478 DCAF5Q96JK2 942 aa33.56■■■□□ 2.96
C9orf50-201ENST00000372478 VIRMAQ69YN4 1812 aaKnown RBP33.55■■■□□ 2.96
C9orf50-201ENST00000372478 RGPD3A6NKT7 1758 aaPredicted RBP33.55■■■□□ 2.96
C9orf50-201ENST00000372478 RGPD4Q7Z3J3 1758 aa33.55■■■□□ 2.96
C9orf50-201ENST00000372478 SCN11AQ9UI33 1791 aa33.54■■■□□ 2.96
C9orf50-201ENST00000372478 PLSCR1O15162 318 aa33.53■■■□□ 2.96
C9orf50-201ENST00000372478 WDR43Q15061 677 aaKnown RBP eCLIP33.53■■■□□ 2.96
C9orf50-201ENST00000372478 GAS2L2Q8NHY3 880 aa33.53■■■□□ 2.96
C9orf50-201ENST00000372478 RREB1Q92766 1687 aa33.52■■■□□ 2.96
C9orf50-201ENST00000372478 PLEKHF1Q96S99 279 aa33.5■■■□□ 2.95
C9orf50-201ENST00000372478 PIGBQ92521 554 aa33.5■■■□□ 2.95
C9orf50-201ENST00000372478 TMOD3Q9NYL9 352 aa33.49■■■□□ 2.95
C9orf50-201ENST00000372478 LGR6Q9HBX8 967 aa33.48■■■□□ 2.95
C9orf50-201ENST00000372478 MAP3K5Q99683 1374 aa33.47■■■□□ 2.95
C9orf50-201ENST00000372478 ERVV-2B6SEH9 535 aa33.47■■■□□ 2.95
C9orf50-201ENST00000372478 ADAMTS8Q9UP79 889 aa33.47■■■□□ 2.95
C9orf50-201ENST00000372478 NUP188Q5SRE5 1749 aa33.47■■■□□ 2.95
C9orf50-201ENST00000372478 NEFMP07197 916 aa33.46■■■□□ 2.95
C9orf50-201ENST00000372478 PROM2Q8N271 834 aa33.46■■■□□ 2.95
C9orf50-201ENST00000372478 ADAMTS7Q9UKP4 1686 aa33.46■■■□□ 2.95
C9orf50-201ENST00000372478 PNNQ9H307 717 aaKnown RBP33.46■■■□□ 2.95
C9orf50-201ENST00000372478 MRS2Q9HD23 443 aa33.46■■■□□ 2.95
C9orf50-201ENST00000372478 GNAT3A8MTJ3 354 aa33.45■■■□□ 2.95
C9orf50-201ENST00000372478 RNMTO43148 476 aaKnown RBP33.45■■■□□ 2.95
C9orf50-201ENST00000372478 CABP4P57796 275 aa33.45■■■□□ 2.95
C9orf50-201ENST00000372478 TXNRD1Q16881 649 aa33.44■■■□□ 2.94
C9orf50-201ENST00000372478 MAPK8IP3Q9UPT6 1336 aa33.44■■■□□ 2.94
C9orf50-201ENST00000372478 DLG5Q8TDM6 1919 aa33.44■■■□□ 2.94
C9orf50-201ENST00000372478 LY75O60449 1722 aa33.43■■■□□ 2.94
C9orf50-201ENST00000372478 CCDC146Q8IYE0 955 aa33.43■■■□□ 2.94
C9orf50-201ENST00000372478 NFATC2IPQ8NCF5 419 aa33.41■■■□□ 2.94
C9orf50-201ENST00000372478 IL17REQ8NFR9 667 aa33.39■■■□□ 2.94
C9orf50-201ENST00000372478 ASAP1Q9ULH1 1129 aa33.39■■■□□ 2.94
C9orf50-201ENST00000372478 PALLDQ8WX93 1383 aa33.39■■■□□ 2.94
C9orf50-201ENST00000372478 MRC1P22897 1456 aa33.38■■■□□ 2.93
C9orf50-201ENST00000372478 SLC52A2Q9HAB3 445 aa33.38■■■□□ 2.93
C9orf50-201ENST00000372478 KCNQ4P56696 695 aa33.37■■■□□ 2.93
C9orf50-201ENST00000372478 NFE2L2Q16236 605 aa33.37■■■□□ 2.93
C9orf50-201ENST00000372478 ATG3Q9NT62 314 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms