RNA–Protein interactions for RNA: ENST00000372275.5

TMEM254-203, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-203ENST00000372275 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
TMEM254-203ENST00000372275 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM254-203ENST00000372275 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
TMEM254-203ENST00000372275 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
TMEM254-203ENST00000372275 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
TMEM254-203ENST00000372275 SYTL4Q96C24 671 aaPredicted RBP13.33□□□□□ -0.28
TMEM254-203ENST00000372275 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
TMEM254-203ENST00000372275 FAM208AQ9UK61 1670 aaKnown RBP13.32□□□□□ -0.28
TMEM254-203ENST00000372275 FBLN1P23142 703 aa13.32□□□□□ -0.28
TMEM254-203ENST00000372275 KCNH5Q8NCM2 988 aa13.32□□□□□ -0.28
TMEM254-203ENST00000372275 ANKRD24Q8TF21 1146 aa13.32□□□□□ -0.28
TMEM254-203ENST00000372275 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
TMEM254-203ENST00000372275 ERBB3P21860 1342 aa13.32□□□□□ -0.28
TMEM254-203ENST00000372275 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
TMEM254-203ENST00000372275 TAF1LQ8IZX4 1826 aa13.32□□□□□ -0.28
TMEM254-203ENST00000372275 C5P01031 1676 aa13.31□□□□□ -0.28
TMEM254-203ENST00000372275 IL2RBP14784 551 aa13.31□□□□□ -0.28
TMEM254-203ENST00000372275 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
TMEM254-203ENST00000372275 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
TMEM254-203ENST00000372275 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
TMEM254-203ENST00000372275 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
TMEM254-203ENST00000372275 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
TMEM254-203ENST00000372275 MAP3K5Q99683 1374 aa13.3□□□□□ -0.28
TMEM254-203ENST00000372275 SMIM5Q71RC9 77 aa13.29□□□□□ -0.28
TMEM254-203ENST00000372275 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
TMEM254-203ENST00000372275 ATP10DQ9P241 1426 aa13.29□□□□□ -0.28
TMEM254-203ENST00000372275 POLD1P28340 1107 aa13.28□□□□□ -0.28
TMEM254-203ENST00000372275 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
TMEM254-203ENST00000372275 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
TMEM254-203ENST00000372275 ROCK2O75116 1388 aaKnown RBP13.28□□□□□ -0.28
TMEM254-203ENST00000372275 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
TMEM254-203ENST00000372275 ITGB4P16144 1822 aa13.27□□□□□ -0.28
TMEM254-203ENST00000372275 NEUROD1Q13562 356 aa13.27□□□□□ -0.29
TMEM254-203ENST00000372275 NSD2O96028 1365 aa13.27□□□□□ -0.29
TMEM254-203ENST00000372275 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
TMEM254-203ENST00000372275 MEGF6O75095 1541 aa13.27□□□□□ -0.29
TMEM254-203ENST00000372275 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
TMEM254-203ENST00000372275 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
TMEM254-203ENST00000372275 COL23A1Q86Y22 540 aaPredicted RBP13.25□□□□□ -0.29
TMEM254-203ENST00000372275 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
TMEM254-203ENST00000372275 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
TMEM254-203ENST00000372275 UBR3Q6ZT12 1888 aa13.23□□□□□ -0.29
TMEM254-203ENST00000372275 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
TMEM254-203ENST00000372275 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
TMEM254-203ENST00000372275 CCNL1Q9UK58 526 aaPredicted RBP13.23□□□□□ -0.29
TMEM254-203ENST00000372275 A0A1W2PP64 1363 aa13.22□□□□□ -0.29
TMEM254-203ENST00000372275 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
TMEM254-203ENST00000372275 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
TMEM254-203ENST00000372275 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
TMEM254-203ENST00000372275 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
TMEM254-203ENST00000372275 SLC27A3Q5K4L6 730 aa13.19□□□□□ -0.3
TMEM254-203ENST00000372275 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
TMEM254-203ENST00000372275 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
TMEM254-203ENST00000372275 PHF14O94880 888 aa13.18□□□□□ -0.3
TMEM254-203ENST00000372275 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
TMEM254-203ENST00000372275 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
TMEM254-203ENST00000372275 KIAA1551Q9HCM1 1747 aa13.17□□□□□ -0.3
TMEM254-203ENST00000372275 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
TMEM254-203ENST00000372275 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
TMEM254-203ENST00000372275 IP6K1Q92551 441 aa13.17□□□□□ -0.3
TMEM254-203ENST00000372275 HOXC9P31274 260 aa13.16□□□□□ -0.3
TMEM254-203ENST00000372275 HDGFL2Q7Z4V5 671 aaPredicted RBP13.16□□□□□ -0.3
TMEM254-203ENST00000372275 ZCRB1Q8TBF4 217 aaKnown RBP13.16□□□□□ -0.3
TMEM254-203ENST00000372275 ADCY9O60503 1353 aa13.16□□□□□ -0.3
TMEM254-203ENST00000372275 USP47Q96K76 1375 aa13.16□□□□□ -0.3
TMEM254-203ENST00000372275 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
TMEM254-203ENST00000372275 AMPHP49418 695 aa13.15□□□□□ -0.3
TMEM254-203ENST00000372275 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
TMEM254-203ENST00000372275 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
TMEM254-203ENST00000372275 HSPA6P17066 643 aa13.14□□□□□ -0.31
TMEM254-203ENST00000372275 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
TMEM254-203ENST00000372275 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
TMEM254-203ENST00000372275 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
TMEM254-203ENST00000372275 PALLDQ8WX93 1383 aa13.13□□□□□ -0.31
TMEM254-203ENST00000372275 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
TMEM254-203ENST00000372275 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
TMEM254-203ENST00000372275 HTRA3P83110 453 aa13.12□□□□□ -0.31
TMEM254-203ENST00000372275 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
TMEM254-203ENST00000372275 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
TMEM254-203ENST00000372275 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
TMEM254-203ENST00000372275 KIF3CO14782 793 aa13.1□□□□□ -0.31
TMEM254-203ENST00000372275 COG3Q96JB2 828 aa13.1□□□□□ -0.31
TMEM254-203ENST00000372275 KIF13BQ9NQT8 1826 aa13.1□□□□□ -0.31
TMEM254-203ENST00000372275 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
TMEM254-203ENST00000372275 AK7Q96M32 723 aa13.09□□□□□ -0.31
TMEM254-203ENST00000372275 TERF2IPQ9NYB0 399 aa13.09□□□□□ -0.31
TMEM254-203ENST00000372275 CYP27B1O15528 508 aa13.08□□□□□ -0.32
TMEM254-203ENST00000372275 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
TMEM254-203ENST00000372275 LINC00116Q8NCU8 138 aa13.08□□□□□ -0.32
TMEM254-203ENST00000372275 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
TMEM254-203ENST00000372275 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
TMEM254-203ENST00000372275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.07□□□□□ -0.32
TMEM254-203ENST00000372275 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
TMEM254-203ENST00000372275 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
TMEM254-203ENST00000372275 NMRK2Q9NPI5 230 aa13.06□□□□□ -0.32
TMEM254-203ENST00000372275 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
TMEM254-203ENST00000372275 ITPK1Q13572 414 aa13.05□□□□□ -0.32
TMEM254-203ENST00000372275 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
TMEM254-203ENST00000372275 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
TMEM254-203ENST00000372275 PIGBQ92521 554 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms