RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MXRA7P84157 204 aa17.85■□□□□ 0.45
GTF3C4-201ENST00000372146 TAOK3Q9H2K8 898 aa17.85■□□□□ 0.45
GTF3C4-201ENST00000372146 HSF2BPO75031 334 aa17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 ZFYP08048 801 aaPredicted RBP17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 FERP16591 822 aa17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 TEFQ10587 303 aa17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 NUP133Q8WUM0 1156 aa17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 NGDNQ8NEJ9 315 aaKnown RBP17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 AAMPQ13685 434 aa17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 V9GYY5 206 aaPredicted RBP17.84■□□□□ 0.45
GTF3C4-201ENST00000372146 APAF1O14727 1248 aa17.83■□□□□ 0.45
GTF3C4-201ENST00000372146 CYP46A1Q9Y6A2 500 aa17.83■□□□□ 0.45
GTF3C4-201ENST00000372146 HIP1O00291 1037 aa17.83■□□□□ 0.45
GTF3C4-201ENST00000372146 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.44
GTF3C4-201ENST00000372146 GTPBP4Q9BZE4 634 aaKnown RBP17.83■□□□□ 0.44
GTF3C4-201ENST00000372146 NUP155O75694 1391 aa17.83■□□□□ 0.44
GTF3C4-201ENST00000372146 CETN2P41208 172 aa17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 CFAP58Q5T655 872 aa17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 RIPK4P57078 832 aa17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 NUP88Q99567 741 aaPredicted RBP17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 C10orf67Q8IYJ2 551 aa17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 CEP135Q66GS9 1140 aa17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 LIG1P18858 919 aa17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 KIF5BP33176 963 aa17.82■□□□□ 0.44
GTF3C4-201ENST00000372146 FSD2A1L4K1 749 aa17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 MACROD2A1Z1Q3 448 aa17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 CEP120Q8N960 986 aa17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 NSRP1Q9H0G5 558 aaKnown RBP17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 HOMER2Q9NSB8 354 aa17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 A0A1W2PRG0 241 aa17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 VGLL3A8MV65 326 aa17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 NAA15Q9BXJ9 866 aaKnown RBP17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 FEZ2Q9UHY8 353 aaPredicted RBP17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 DZIP1Q86YF9 867 aaKnown RBP17.81■□□□□ 0.44
GTF3C4-201ENST00000372146 TRIM22Q8IYM9 498 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 CCDC183Q5T5S1 534 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 TCHPQ9BT92 498 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 PAFAH1B1P43034 410 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 PPP1R14CQ8TAE6 165 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 PAXBP1Q9Y5B6 917 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 GON4LQ3T8J9 2241 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
GTF3C4-201ENST00000372146 UBTFL1P0CB47 393 aaPredicted RBP17.79■□□□□ 0.44
GTF3C4-201ENST00000372146 CCDC121Q6ZUS5 278 aa17.79■□□□□ 0.44
GTF3C4-201ENST00000372146 SNW1Q13573 536 aaKnown RBP17.79■□□□□ 0.44
GTF3C4-201ENST00000372146 LARP1Q6PKG0 1096 aaKnown RBP17.79■□□□□ 0.44
GTF3C4-201ENST00000372146 CCDC83Q8IWF9 413 aa17.79■□□□□ 0.44
GTF3C4-201ENST00000372146 PDE1CQ14123 709 aaPredicted RBP17.79■□□□□ 0.44
GTF3C4-201ENST00000372146 ALS2CR12Q96Q35 445 aa17.79■□□□□ 0.44
GTF3C4-201ENST00000372146 KIF4AO95239 1232 aa17.78■□□□□ 0.44
GTF3C4-201ENST00000372146 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
GTF3C4-201ENST00000372146 PSMD1Q99460 953 aa17.78■□□□□ 0.44
GTF3C4-201ENST00000372146 RASSF4Q9H2L5 321 aa17.78■□□□□ 0.44
GTF3C4-201ENST00000372146 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
GTF3C4-201ENST00000372146 CAPN2P17655 700 aa17.78■□□□□ 0.44
GTF3C4-201ENST00000372146 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
GTF3C4-201ENST00000372146 VPS36Q86VN1 386 aa17.77■□□□□ 0.44
GTF3C4-201ENST00000372146 USP47Q96K76 1375 aa17.77■□□□□ 0.44
GTF3C4-201ENST00000372146 RPUSD2Q8IZ73 545 aaKnown RBP17.77■□□□□ 0.44
GTF3C4-201ENST00000372146 JADE2Q9NQC1 790 aa17.77■□□□□ 0.44
GTF3C4-201ENST00000372146 PRIMPOLQ96LW4 560 aa17.77■□□□□ 0.43
GTF3C4-201ENST00000372146 ARFGAP3Q9NP61 516 aa17.77■□□□□ 0.43
GTF3C4-201ENST00000372146 TMCO4Q5TGY1 634 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 FAM114A2Q9NRY5 505 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 CACNA2D4Q7Z3S7 1137 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 GBP7Q8N8V2 638 aaPredicted RBP17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 COG3Q96JB2 828 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 RNF168Q8IYW5 571 aaPredicted RBP17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 OTUD6BQ8N6M0 293 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 MCM6Q14566 821 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 KLHL10Q6JEL2 608 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 IKBKGQ9Y6K9 419 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 SSBP05455 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 L3MBTL2Q969R5 705 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 COMMD10Q9Y6G5 202 aa17.76■□□□□ 0.43
GTF3C4-201ENST00000372146 FLIIQ13045 1269 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 BACH2Q9BYV9 841 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 AKNAQ7Z591 1439 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 TTC36A6NLP5 189 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 NUTM2DQ5VT03 806 aaPredicted RBP17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 PPP1R12BO60237 982 aaPredicted RBP17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 A0A1B0GUA9 196 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 USO1O60763 962 aaKnown RBP17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 GOLGA6L9A6NEM1 432 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 PSMC4P43686 418 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 CCDC94Q9BW85 323 aaPredicted RBP17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 FKBP15Q5T1M5 1219 aa17.75■□□□□ 0.43
GTF3C4-201ENST00000372146 MSH5O43196 834 aa17.74■□□□□ 0.43
GTF3C4-201ENST00000372146 TRIM21P19474 475 aaKnown RBP17.74■□□□□ 0.43
GTF3C4-201ENST00000372146 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms