RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 NUTM2BA6NNL0 878 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-206ENST00000372077 NUTM2EB1AL46 878 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-206ENST00000372077 NUTM2AQ8IVF1 878 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-206ENST00000372077 IL16Q14005 1332 aa24■■□□□ 1.43
VEGFA-206ENST00000372077 ADAMTS2O95450 1211 aa24■■□□□ 1.43
VEGFA-206ENST00000372077 PLEKHG2Q9H7P9 1386 aa24■■□□□ 1.43
VEGFA-206ENST00000372077 SPATA31A6Q5VVP1 1343 aa24■■□□□ 1.43
VEGFA-206ENST00000372077 EVA1CP58658 441 aa24■■□□□ 1.43
VEGFA-206ENST00000372077 CARD10Q9BWT7 1032 aa24■■□□□ 1.43
VEGFA-206ENST00000372077 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
VEGFA-206ENST00000372077 LARP1Q6PKG0 1096 aaKnown RBP23.98■■□□□ 1.43
VEGFA-206ENST00000372077 PLCH1Q4KWH8 1693 aa23.98■■□□□ 1.43
VEGFA-206ENST00000372077 AMOTQ4VCS5 1084 aa23.98■■□□□ 1.43
VEGFA-206ENST00000372077 PLEKHO1Q53GL0 409 aaPredicted RBP23.98■■□□□ 1.43
VEGFA-206ENST00000372077 STRN4Q9NRL3 753 aa23.98■■□□□ 1.43
VEGFA-206ENST00000372077 HTATSF1O43719 755 aaKnown RBP23.97■■□□□ 1.43
VEGFA-206ENST00000372077 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
VEGFA-206ENST00000372077 CRB1P82279 1406 aa23.96■■□□□ 1.43
VEGFA-206ENST00000372077 MEGF6O75095 1541 aa23.95■■□□□ 1.43
VEGFA-206ENST00000372077 CALD1Q05682 793 aaKnown RBP23.95■■□□□ 1.42
VEGFA-206ENST00000372077 TATP17735 454 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-206ENST00000372077 NRAPQ86VF7 1730 aa23.95■■□□□ 1.42
VEGFA-206ENST00000372077 SLIT2O94813 1529 aa23.94■■□□□ 1.42
VEGFA-206ENST00000372077 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
VEGFA-206ENST00000372077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.94■■□□□ 1.427e-31■□□□□ 9.1
VEGFA-206ENST00000372077 NWD2Q9ULI1 1742 aa23.94■■□□□ 1.42
VEGFA-206ENST00000372077 MAP3K5Q99683 1374 aa23.93■■□□□ 1.42
VEGFA-206ENST00000372077 GNAT3A8MTJ3 354 aa23.93■■□□□ 1.42
VEGFA-206ENST00000372077 DCTN1Q14203 1278 aa23.93■■□□□ 1.42
VEGFA-206ENST00000372077 CCDC136Q96JN2 1154 aa23.93■■□□□ 1.42
VEGFA-206ENST00000372077 MYH16Q9H6N6 1097 aa23.93■■□□□ 1.42
VEGFA-206ENST00000372077 LRP6O75581 1613 aa23.92■■□□□ 1.42
VEGFA-206ENST00000372077 RTF1Q92541 710 aaKnown RBP23.91■■□□□ 1.42
VEGFA-206ENST00000372077 ZNF853P0CG23 659 aa23.91■■□□□ 1.42
VEGFA-206ENST00000372077 AKAP4Q5JQC9 854 aa23.91■■□□□ 1.42
VEGFA-206ENST00000372077 MCM10Q7L590 875 aa23.91■■□□□ 1.42
VEGFA-206ENST00000372077 ZNF530Q6P9A1 599 aaPredicted RBP23.9■■□□□ 1.42
VEGFA-206ENST00000372077 OVOS2A0A0G2JMS6 1433 aa23.9■■□□□ 1.42
VEGFA-206ENST00000372077 PKD1L3Q7Z443 1732 aa23.9■■□□□ 1.42
VEGFA-206ENST00000372077 IFT57Q9NWB7 429 aa23.9■■□□□ 1.42
VEGFA-206ENST00000372077 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
VEGFA-206ENST00000372077 SPG7Q9UQ90 795 aa23.89■■□□□ 1.41
VEGFA-206ENST00000372077 IL17REQ8NFR9 667 aa23.88■■□□□ 1.41
VEGFA-206ENST00000372077 LRRC37A3O60309 1634 aa23.88■■□□□ 1.41
VEGFA-206ENST00000372077 IL2RBP14784 551 aa23.88■■□□□ 1.41
VEGFA-206ENST00000372077 GNAI1P63096 354 aa23.88■■□□□ 1.41
VEGFA-206ENST00000372077 SKAP1Q86WV1 359 aa23.88■■□□□ 1.41
VEGFA-206ENST00000372077 CFAP44Q96MT7 982 aa23.88■■□□□ 1.41
VEGFA-206ENST00000372077 FANCIQ9NVI1 1328 aa23.87■■□□□ 1.41
VEGFA-206ENST00000372077 NBR1Q14596 966 aa23.86■■□□□ 1.41
VEGFA-206ENST00000372077 FNBP4Q8N3X1 1017 aaPredicted RBP23.86■■□□□ 1.41
VEGFA-206ENST00000372077 C1orf141Q5JVX7 400 aa23.86■■□□□ 1.41
VEGFA-206ENST00000372077 CEMIPQ8WUJ3 1361 aa23.85■■□□□ 1.41
VEGFA-206ENST00000372077 TSR2Q969E8 191 aaKnown RBP23.85■■□□□ 1.41
VEGFA-206ENST00000372077 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
VEGFA-206ENST00000372077 RCAN3Q9UKA8 241 aa23.85■■□□□ 1.41
VEGFA-206ENST00000372077 DISP2A7MBM2 1401 aa23.85■■□□□ 1.41
VEGFA-206ENST00000372077 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
VEGFA-206ENST00000372077 ADAMTS7Q9UKP4 1686 aa23.84■■□□□ 1.41
VEGFA-206ENST00000372077 PLIN1O60240 522 aa23.83■■□□□ 1.41
VEGFA-206ENST00000372077 UNC5CLQ8IV45 518 aa23.83■■□□□ 1.41
VEGFA-206ENST00000372077 BCL9LQ86UU0 1499 aa23.83■■□□□ 1.41
VEGFA-206ENST00000372077 CHL1O00533 1208 aa23.83■■□□□ 1.41
VEGFA-206ENST00000372077 LAS1LQ9Y4W2 734 aaKnown RBP23.83■■□□□ 1.41
VEGFA-206ENST00000372077 SPATA31A1Q5TZJ5 1347 aa23.83■■□□□ 1.41
VEGFA-206ENST00000372077 PHKG2P15735 406 aa23.83■■□□□ 1.4
VEGFA-206ENST00000372077 NPM2Q86SE8 214 aaKnown RBP23.83■■□□□ 1.4
VEGFA-206ENST00000372077 USP35Q9P2H5 1018 aa23.83■■□□□ 1.4
VEGFA-206ENST00000372077 IFNL2Q8IZJ0 200 aa23.82■■□□□ 1.4
VEGFA-206ENST00000372077 ZCRB1Q8TBF4 217 aaKnown RBP23.82■■□□□ 1.4
VEGFA-206ENST00000372077 LGR6Q9HBX8 967 aa23.82■■□□□ 1.4
VEGFA-206ENST00000372077 MBIPQ9NS73 344 aa23.82■■□□□ 1.4
VEGFA-206ENST00000372077 THRAP3Q9Y2W1 955 aaKnown RBP23.82■■□□□ 1.4
VEGFA-206ENST00000372077 SPATA31A5Q5VU36 1347 aa23.81■■□□□ 1.4
VEGFA-206ENST00000372077 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
VEGFA-206ENST00000372077 SPATA31A7Q8IWB4 1347 aa23.81■■□□□ 1.4
VEGFA-206ENST00000372077 CYP27B1O15528 508 aa23.81■■□□□ 1.4
VEGFA-206ENST00000372077 RNMTO43148 476 aaKnown RBP23.81■■□□□ 1.4
VEGFA-206ENST00000372077 MPRIPQ6WCQ1 1025 aa23.8■■□□□ 1.4
VEGFA-206ENST00000372077 WNK3Q9BYP7 1800 aa23.8■■□□□ 1.4
VEGFA-206ENST00000372077 EXOSC9Q06265 439 aaKnown RBP23.79■■□□□ 1.4
VEGFA-206ENST00000372077 SHANK3Q9BYB0 1731 aa23.79■■□□□ 1.4
VEGFA-206ENST00000372077 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.79■■□□□ 1.4
VEGFA-206ENST00000372077 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-206ENST00000372077 BABAM1Q9NWV8 329 aa23.79■■□□□ 1.4
VEGFA-206ENST00000372077 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
VEGFA-206ENST00000372077 PCDH11XQ9BZA7 1347 aa23.78■■□□□ 1.4
VEGFA-206ENST00000372077 PCDH11YQ9BZA8 1340 aa23.78■■□□□ 1.4
VEGFA-206ENST00000372077 VPS72Q15906 364 aa23.78■■□□□ 1.4
VEGFA-206ENST00000372077 EXOC6Q8TAG9 804 aa23.78■■□□□ 1.4
VEGFA-206ENST00000372077 TAF7Q15545 349 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-206ENST00000372077 MEX3CQ5U5Q3 659 aaKnown RBP23.77■■□□□ 1.4
VEGFA-206ENST00000372077 CDCA7Q9BWT1 371 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-206ENST00000372077 HSP90AB1P08238 724 aaKnown RBP23.76■■□□□ 1.39
VEGFA-206ENST00000372077 KDM6AO15550 1401 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-206ENST00000372077 SCN11AQ9UI33 1791 aa23.76■■□□□ 1.39
VEGFA-206ENST00000372077 BARGINQ6ZT62 677 aa23.75■■□□□ 1.39
VEGFA-206ENST00000372077 USP21Q9UK80 565 aa23.75■■□□□ 1.39
VEGFA-206ENST00000372077 DCAF5Q96JK2 942 aa23.75■■□□□ 1.39
VEGFA-206ENST00000372077 NKX1-1Q15270 411 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms