RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 BCL2L13Q9BXK5 485 aa36.15■■■■□ 3.38
SDCCAG3-204ENST00000371725 MCM10Q7L590 875 aa36.14■■■■□ 3.38
SDCCAG3-204ENST00000371725 CRYBG1Q9Y4K1 1723 aa36.14■■■■□ 3.38
SDCCAG3-204ENST00000371725 RARSP54136 660 aaKnown RBP36.13■■■■□ 3.37
SDCCAG3-204ENST00000371725 SOS2Q07890 1332 aaPredicted RBP36.13■■■■□ 3.37
SDCCAG3-204ENST00000371725 LMOD3Q0VAK6 560 aa36.11■■■■□ 3.37
SDCCAG3-204ENST00000371725 ANKRD24Q8TF21 1146 aa36.11■■■■□ 3.37
SDCCAG3-204ENST00000371725 RGS3P49796 1198 aa36.1■■■■□ 3.37
SDCCAG3-204ENST00000371725 AAMPQ13685 434 aa36.1■■■■□ 3.37
SDCCAG3-204ENST00000371725 LTBP4Q8N2S1 1624 aa36.1■■■■□ 3.37
SDCCAG3-204ENST00000371725 DAXXQ9UER7 740 aaPredicted RBP36.1■■■■□ 3.37
SDCCAG3-204ENST00000371725 IGHDP01880 384 aa36.09■■■■□ 3.37
SDCCAG3-204ENST00000371725 CHRNA2Q15822 529 aa36.08■■■■□ 3.37
SDCCAG3-204ENST00000371725 CLUAP1Q96AJ1 413 aa36.07■■■■□ 3.37
SDCCAG3-204ENST00000371725 ZNF853P0CG23 659 aa36.07■■■■□ 3.36
SDCCAG3-204ENST00000371725 MBIPQ9NS73 344 aa36.07■■■■□ 3.36
SDCCAG3-204ENST00000371725 IFT57Q9NWB7 429 aa36.05■■■■□ 3.36
SDCCAG3-204ENST00000371725 NHSL1Q5SYE7 1610 aa36.05■■■■□ 3.36
SDCCAG3-204ENST00000371725 CALD1Q05682 793 aaKnown RBP36.04■■■■□ 3.36
SDCCAG3-204ENST00000371725 COL18A1P39060 1754 aa36.04■■■■□ 3.36
SDCCAG3-204ENST00000371725 FRAT1Q92837 279 aaPredicted RBP36.04■■■■□ 3.36
SDCCAG3-204ENST00000371725 GNAI1P63096 354 aa36.03■■■■□ 3.36
SDCCAG3-204ENST00000371725 KIAA0232Q92628 1395 aa36.02■■■■□ 3.36
SDCCAG3-204ENST00000371725 CFAP44Q96MT7 982 aa36.02■■■■□ 3.36
SDCCAG3-204ENST00000371725 NFKBIBQ15653 356 aa36.01■■■■□ 3.35
SDCCAG3-204ENST00000371725 GAS2L2Q8NHY3 880 aa36.01■■■■□ 3.35
SDCCAG3-204ENST00000371725 ERBB3P21860 1342 aa36■■■■□ 3.35
SDCCAG3-204ENST00000371725 TNNQ9UQP3 1299 aa36■■■■□ 3.35
SDCCAG3-204ENST00000371725 SLC4A3P48751 1232 aa35.99■■■■□ 3.35
SDCCAG3-204ENST00000371725 TSPYL6Q8N831 410 aa35.99■■■■□ 3.35
SDCCAG3-204ENST00000371725 CANXP27824 592 aaKnown RBP35.99■■■■□ 3.35
SDCCAG3-204ENST00000371725 PANK1Q8TE04 598 aa35.99■■■■□ 3.35
SDCCAG3-204ENST00000371725 COG6Q9Y2V7 657 aa35.98■■■■□ 3.35
SDCCAG3-204ENST00000371725 ELL2O00472 640 aaPredicted RBP35.98■■■■□ 3.35
SDCCAG3-204ENST00000371725 ROBO1Q9Y6N7 1651 aa35.97■■■■□ 3.35
SDCCAG3-204ENST00000371725 SSH1Q8WYL5 1049 aa35.96■■■■□ 3.35
SDCCAG3-204ENST00000371725 CRB1P82279 1406 aa35.96■■■■□ 3.35
SDCCAG3-204ENST00000371725 RTF1Q92541 710 aaKnown RBP35.96■■■■□ 3.35
SDCCAG3-204ENST00000371725 MIS18AQ9NYP9 233 aa35.96■■■■□ 3.35
SDCCAG3-204ENST00000371725 VIRMAQ69YN4 1812 aaKnown RBP35.95■■■■□ 3.35
SDCCAG3-204ENST00000371725 CAMTA1Q9Y6Y1 1673 aa35.94■■■■□ 3.34
SDCCAG3-204ENST00000371725 CT47B1P0C2W7 299 aaPredicted RBP35.94■■■■□ 3.34
SDCCAG3-204ENST00000371725 NCAPD2Q15021 1401 aa35.93■■■■□ 3.34
SDCCAG3-204ENST00000371725 ABCA3Q99758 1704 aa35.93■■■■□ 3.34
SDCCAG3-204ENST00000371725 C8orf58Q8NAV2 365 aa35.93■■■■□ 3.34
SDCCAG3-204ENST00000371725 SMC4Q9NTJ3 1288 aa35.93■■■■□ 3.34
SDCCAG3-204ENST00000371725 GNAT3A8MTJ3 354 aa35.92■■■■□ 3.34
SDCCAG3-204ENST00000371725 KRT24Q2M2I5 525 aa35.92■■■■□ 3.34
SDCCAG3-204ENST00000371725 CPDO75976 1380 aa35.91■■■■□ 3.34
SDCCAG3-204ENST00000371725 NLRP2Q9NX02 1062 aa35.9■■■■□ 3.34
SDCCAG3-204ENST00000371725 MAP3K5Q99683 1374 aa35.9■■■■□ 3.34
SDCCAG3-204ENST00000371725 CHL1O00533 1208 aa35.9■■■■□ 3.34
SDCCAG3-204ENST00000371725 HAP1P54257 671 aaPredicted RBP35.9■■■■□ 3.34
SDCCAG3-204ENST00000371725 VAMP4O75379 141 aa35.89■■■■□ 3.34
SDCCAG3-204ENST00000371725 IL17REQ8NFR9 667 aa35.89■■■■□ 3.34
SDCCAG3-204ENST00000371725 LMO7Q8WWI1 1683 aa35.89■■■■□ 3.34
SDCCAG3-204ENST00000371725 GSE1Q14687 1217 aa35.88■■■■□ 3.33
SDCCAG3-204ENST00000371725 CSB-PGBD3P0DP91 1061 aa35.87■■■■□ 3.33
SDCCAG3-204ENST00000371725 RLBP1P12271 317 aa35.87■■■■□ 3.33
SDCCAG3-204ENST00000371725 PRDM11Q9NQV5 511 aa35.87■■■■□ 3.33
SDCCAG3-204ENST00000371725 LRRC37A3O60309 1634 aa35.86■■■■□ 3.33
SDCCAG3-204ENST00000371725 TWISTNBQ3B726 338 aaPredicted RBP35.85■■■■□ 3.33
SDCCAG3-204ENST00000371725 FAM208AQ9UK61 1670 aaKnown RBP35.84■■■■□ 3.33
SDCCAG3-204ENST00000371725 HTATSF1O43719 755 aaKnown RBP35.83■■■■□ 3.33
SDCCAG3-204ENST00000371725 ZNF530Q6P9A1 599 aaPredicted RBP35.83■■■■□ 3.33
SDCCAG3-204ENST00000371725 LGR6Q9HBX8 967 aa35.81■■■■□ 3.32
SDCCAG3-204ENST00000371725 NOB1Q9ULX3 412 aaKnown RBP35.81■■■■□ 3.32
SDCCAG3-204ENST00000371725 PLEKHO1Q53GL0 409 aaPredicted RBP35.8■■■■□ 3.32
SDCCAG3-204ENST00000371725 TSPYL4Q9UJ04 414 aa35.8■■■■□ 3.32
SDCCAG3-204ENST00000371725 PCDHB15Q9Y5E8 787 aa35.8■■■■□ 3.32
SDCCAG3-204ENST00000371725 ABCC6O95255 1503 aa35.79■■■■□ 3.32
SDCCAG3-204ENST00000371725 ZKSCAN2Q63HK3 967 aa35.78■■■■□ 3.32
SDCCAG3-204ENST00000371725 ALDH1L2Q3SY69 923 aa35.77■■■■□ 3.32
SDCCAG3-204ENST00000371725 MPRIPQ6WCQ1 1025 aa35.77■■■■□ 3.32
SDCCAG3-204ENST00000371725 MEGF6O75095 1541 aa35.76■■■■□ 3.32
SDCCAG3-204ENST00000371725 TRIM27P14373 513 aa35.76■■■■□ 3.32
SDCCAG3-204ENST00000371725 AHDC1Q5TGY3 1603 aaPredicted RBP35.76■■■■□ 3.32
SDCCAG3-204ENST00000371725 RWDD1Q9H446 243 aaPredicted RBP35.75■■■■□ 3.31
SDCCAG3-204ENST00000371725 SEC24BO95487 1268 aa35.74■■■■□ 3.31
SDCCAG3-204ENST00000371725 AMOTQ4VCS5 1084 aa35.74■■■■□ 3.31
SDCCAG3-204ENST00000371725 PIP4K2BP78356 416 aa35.74■■■■□ 3.31
SDCCAG3-204ENST00000371725 AKAP4Q5JQC9 854 aa35.74■■■■□ 3.31
SDCCAG3-204ENST00000371725 MRPL50Q8N5N7 158 aaKnown RBP35.73■■■■□ 3.31
SDCCAG3-204ENST00000371725 RAPGEF4Q8WZA2 1011 aa35.73■■■■□ 3.31
SDCCAG3-204ENST00000371725 CEMIPQ8WUJ3 1361 aa35.72■■■■□ 3.31
SDCCAG3-204ENST00000371725 COL5A2P05997 1499 aaPredicted RBP35.71■■■■□ 3.31
SDCCAG3-204ENST00000371725 ATF7IPQ6VMQ6 1270 aa35.71■■■■□ 3.31
SDCCAG3-204ENST00000371725 ZNF428Q96B54 188 aa35.71■■■■□ 3.31
SDCCAG3-204ENST00000371725 BECN1Q14457 450 aa35.7■■■■□ 3.31
SDCCAG3-204ENST00000371725 MVPQ14764 893 aaKnown RBP35.7■■■■□ 3.31
SDCCAG3-204ENST00000371725 DZIP1LQ8IYY4 767 aaKnown RBP35.7■■■■□ 3.31
SDCCAG3-204ENST00000371725 TAF7Q15545 349 aaPredicted RBP35.69■■■■□ 3.3
SDCCAG3-204ENST00000371725 C1orf141Q5JVX7 400 aa35.69■■■■□ 3.3
SDCCAG3-204ENST00000371725 PDZRN3Q9UPQ7 1066 aa35.69■■■■□ 3.3
SDCCAG3-204ENST00000371725 STRN4Q9NRL3 753 aa35.69■■■■□ 3.3
SDCCAG3-204ENST00000371725 FTSJ3Q8IY81 847 aaKnown RBP35.68■■■■□ 3.3
SDCCAG3-204ENST00000371725 WDR17Q8IZU2 1322 aa35.68■■■■□ 3.3
SDCCAG3-204ENST00000371725 KIF16BQ96L93 1317 aa35.68■■■■□ 3.3
SDCCAG3-204ENST00000371725 TATP17735 454 aaPredicted RBP35.68■■■■□ 3.3
SDCCAG3-204ENST00000371725 IL27Q8NEV9 243 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms