RNA–Protein interactions for RNA: ENST00000371281.3

TTC4-201, Transcript of tetratricopeptide repeat domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC4, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4-201ENST00000371281 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
TTC4-201ENST00000371281 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
TTC4-201ENST00000371281 STRCQ7RTU9 1775 aa17.11■□□□□ 0.33
TTC4-201ENST00000371281 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
TTC4-201ENST00000371281 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
TTC4-201ENST00000371281 VIRMAQ69YN4 1812 aaKnown RBP17.11■□□□□ 0.33
TTC4-201ENST00000371281 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
TTC4-201ENST00000371281 MSH6P52701 1360 aa17.1■□□□□ 0.33
TTC4-201ENST00000371281 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
TTC4-201ENST00000371281 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
TTC4-201ENST00000371281 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
TTC4-201ENST00000371281 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
TTC4-201ENST00000371281 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
TTC4-201ENST00000371281 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
TTC4-201ENST00000371281 LTV1Q96GA3 475 aaPredicted RBP17.09■□□□□ 0.33
TTC4-201ENST00000371281 GCP02774 474 aa17.09■□□□□ 0.33
TTC4-201ENST00000371281 ATF3P18847 181 aa17.09■□□□□ 0.33
TTC4-201ENST00000371281 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
TTC4-201ENST00000371281 ABCC4O15439 1325 aa17.08■□□□□ 0.33
TTC4-201ENST00000371281 MSH5O43196 834 aa17.08■□□□□ 0.33
TTC4-201ENST00000371281 HSPA2P54652 639 aa17.08■□□□□ 0.33
TTC4-201ENST00000371281 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.33
TTC4-201ENST00000371281 MAP3K5Q99683 1374 aa17.08■□□□□ 0.32
TTC4-201ENST00000371281 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
TTC4-201ENST00000371281 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
TTC4-201ENST00000371281 GNAT3A8MTJ3 354 aa17.07■□□□□ 0.32
TTC4-201ENST00000371281 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
TTC4-201ENST00000371281 RGS3P49796 1198 aa17.06■□□□□ 0.32
TTC4-201ENST00000371281 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
TTC4-201ENST00000371281 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
TTC4-201ENST00000371281 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
TTC4-201ENST00000371281 RGPD5Q99666 1765 aa17.05■□□□□ 0.32
TTC4-201ENST00000371281 KDM4FA0A1W2PPD8 638 aa17.05■□□□□ 0.32
TTC4-201ENST00000371281 FAM161AQ3B820 660 aa17.05■□□□□ 0.32
TTC4-201ENST00000371281 CRYBG1Q9Y4K1 1723 aa17.05■□□□□ 0.32
TTC4-201ENST00000371281 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
TTC4-201ENST00000371281 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
TTC4-201ENST00000371281 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
TTC4-201ENST00000371281 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
TTC4-201ENST00000371281 ANP32AP39687 249 aaKnown RBP17.04■□□□□ 0.32
TTC4-201ENST00000371281 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
TTC4-201ENST00000371281 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
TTC4-201ENST00000371281 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
TTC4-201ENST00000371281 RGS12O14924 1447 aa17.03■□□□□ 0.32
TTC4-201ENST00000371281 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
TTC4-201ENST00000371281 PDZRN3Q9UPQ7 1066 aa17.03■□□□□ 0.32
TTC4-201ENST00000371281 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
TTC4-201ENST00000371281 PXDNQ92626 1479 aa17.02■□□□□ 0.32
TTC4-201ENST00000371281 LMOD2Q6P5Q4 547 aa17.02■□□□□ 0.31
TTC4-201ENST00000371281 IL17REQ8NFR9 667 aa17.02■□□□□ 0.31
TTC4-201ENST00000371281 COL18A1P39060 1754 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 CACNA1FO60840 1977 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 ABCC6O95255 1503 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 KDM3BQ7LBC6 1761 aa17.01■□□□□ 0.31
TTC4-201ENST00000371281 SMC5Q8IY18 1101 aa17■□□□□ 0.31
TTC4-201ENST00000371281 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
TTC4-201ENST00000371281 PTPRCP08575 1304 aa17■□□□□ 0.31
TTC4-201ENST00000371281 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
TTC4-201ENST00000371281 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
TTC4-201ENST00000371281 TAF7Q15545 349 aaPredicted RBP16.98■□□□□ 0.31
TTC4-201ENST00000371281 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
TTC4-201ENST00000371281 IPO9Q96P70 1041 aaKnown RBP16.98■□□□□ 0.31
TTC4-201ENST00000371281 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
TTC4-201ENST00000371281 AXIN2Q9Y2T1 843 aa16.97■□□□□ 0.31
TTC4-201ENST00000371281 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
TTC4-201ENST00000371281 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
TTC4-201ENST00000371281 N4BP2Q86UW6 1770 aaPredicted RBP16.96■□□□□ 0.31
TTC4-201ENST00000371281 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
TTC4-201ENST00000371281 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
TTC4-201ENST00000371281 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
TTC4-201ENST00000371281 ERBB3P21860 1342 aa16.95■□□□□ 0.3
TTC4-201ENST00000371281 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
TTC4-201ENST00000371281 SIPA1L3O60292 1781 aaPredicted RBP16.95■□□□□ 0.3
TTC4-201ENST00000371281 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
TTC4-201ENST00000371281 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
TTC4-201ENST00000371281 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
TTC4-201ENST00000371281 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
TTC4-201ENST00000371281 ZC3H6P61129 1189 aaKnown RBP16.93■□□□□ 0.3
TTC4-201ENST00000371281 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
TTC4-201ENST00000371281 BRINP3Q76B58 766 aa16.92■□□□□ 0.3
TTC4-201ENST00000371281 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
TTC4-201ENST00000371281 LGR6Q9HBX8 967 aa16.92■□□□□ 0.3
TTC4-201ENST00000371281 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
TTC4-201ENST00000371281 NUCB1Q02818 461 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 CPDO75976 1380 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 PLEKHG2Q9H7P9 1386 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
TTC4-201ENST00000371281 G2E3Q7L622 706 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 ANP32EQ9BTT0 268 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
TTC4-201ENST00000371281 ATP10DQ9P241 1426 aa16.9■□□□□ 0.3
TTC4-201ENST00000371281 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms