RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 PANK3Q9H999 370 aa15.23■□□□□ 0.03
EXOSC1-202ENST00000370885 FLT4P35916 1363 aa15.23■□□□□ 0.03
EXOSC1-202ENST00000370885 ZCRB1Q8TBF4 217 aaKnown RBP15.22■□□□□ 0.03
EXOSC1-202ENST00000370885 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
EXOSC1-202ENST00000370885 CASZ1Q86V15 1759 aa15.21■□□□□ 0.03
EXOSC1-202ENST00000370885 LRRC4BQ9NT99 713 aa15.21■□□□□ 0.03
EXOSC1-202ENST00000370885 NSD2O96028 1365 aa15.21■□□□□ 0.02
EXOSC1-202ENST00000370885 KIF24Q5T7B8 1368 aa15.21■□□□□ 0.02
EXOSC1-202ENST00000370885 DOT1LQ8TEK3 1739 aa15.2■□□□□ 0.02
EXOSC1-202ENST00000370885 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
EXOSC1-202ENST00000370885 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
EXOSC1-202ENST00000370885 PAPPAQ13219 1627 aa15.2■□□□□ 0.02
EXOSC1-202ENST00000370885 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
EXOSC1-202ENST00000370885 PPM1GO15355 546 aaPredicted RBP15.19■□□□□ 0.02
EXOSC1-202ENST00000370885 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
EXOSC1-202ENST00000370885 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
EXOSC1-202ENST00000370885 KCNQ4P56696 695 aa15.18■□□□□ 0.02
EXOSC1-202ENST00000370885 EYA1Q99502 592 aa15.17■□□□□ 0.02
EXOSC1-202ENST00000370885 SMG6Q86US8 1419 aaKnown RBP15.17■□□□□ 0.02
EXOSC1-202ENST00000370885 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
EXOSC1-202ENST00000370885 CYP27B1O15528 508 aa15.16■□□□□ 0.02
EXOSC1-202ENST00000370885 SLC15A2Q16348 729 aa15.16■□□□□ 0.02
EXOSC1-202ENST00000370885 ZNF827Q17R98 1081 aa15.16■□□□□ 0.02
EXOSC1-202ENST00000370885 TOGARAM1Q9Y4F4 1720 aa15.15■□□□□ 0.02
EXOSC1-202ENST00000370885 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
EXOSC1-202ENST00000370885 EIF4A2Q14240 407 aaKnown RBP15.15■□□□□ 0.02
EXOSC1-202ENST00000370885 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
EXOSC1-202ENST00000370885 SYTL4Q96C24 671 aaPredicted RBP15.15■□□□□ 0.02
EXOSC1-202ENST00000370885 PKD1L3Q7Z443 1732 aa15.14■□□□□ 0.01
EXOSC1-202ENST00000370885 ZBTB7AO95365 584 aa15.14■□□□□ 0.01
EXOSC1-202ENST00000370885 LY75O60449 1722 aa15.14■□□□□ 0.01
EXOSC1-202ENST00000370885 SPON1Q9HCB6 807 aa15.13■□□□□ 0.01
EXOSC1-202ENST00000370885 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
EXOSC1-202ENST00000370885 PTGER2P43116 358 aa15.12■□□□□ 0.01
EXOSC1-202ENST00000370885 AMER1Q5JTC6 1135 aaPredicted RBP15.12■□□□□ 0.01
EXOSC1-202ENST00000370885 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
EXOSC1-202ENST00000370885 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
EXOSC1-202ENST00000370885 TUBGCP6Q96RT7 1819 aa15.11■□□□□ 0.01
EXOSC1-202ENST00000370885 ITGB4P16144 1822 aa15.1■□□□□ 0.01
EXOSC1-202ENST00000370885 PER1O15534 1290 aaPredicted RBP15.1■□□□□ 0.01
EXOSC1-202ENST00000370885 SGIP1Q9BQI5 828 aa15.1■□□□□ 0.01
EXOSC1-202ENST00000370885 PCDH11XQ9BZA7 1347 aa15.1■□□□□ 0.01
EXOSC1-202ENST00000370885 PCDH11YQ9BZA8 1340 aa15.1■□□□□ 0.01
EXOSC1-202ENST00000370885 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
EXOSC1-202ENST00000370885 SLC27A3Q5K4L6 730 aa15.08■□□□□ 0
EXOSC1-202ENST00000370885 MORC1Q86VD1 984 aa15.08■□□□□ 0
EXOSC1-202ENST00000370885 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0
EXOSC1-202ENST00000370885 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
EXOSC1-202ENST00000370885 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
EXOSC1-202ENST00000370885 KNSTRNQ9Y448 316 aa15.07■□□□□ 0
EXOSC1-202ENST00000370885 PIGBQ92521 554 aa15.06■□□□□ 0
EXOSC1-202ENST00000370885 CCNL1Q9UK58 526 aaPredicted RBP15.06■□□□□ 0
EXOSC1-202ENST00000370885 PNPLA7Q6ZV29 1317 aa15.06■□□□□ 0
EXOSC1-202ENST00000370885 QSER1Q2KHR3 1735 aa15.06■□□□□ 0
EXOSC1-202ENST00000370885 PHKG2P15735 406 aa15.05■□□□□ -0
EXOSC1-202ENST00000370885 MTFR1LQ9H019 292 aa15.05■□□□□ -0
EXOSC1-202ENST00000370885 IL13P35225 146 aa15.04■□□□□ -0
EXOSC1-202ENST00000370885 AMIGO3Q86WK7 504 aa15.04■□□□□ -0
EXOSC1-202ENST00000370885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.04■□□□□ -0
EXOSC1-202ENST00000370885 PPP1R1BQ9UD71 204 aaPredicted RBP15.04■□□□□ -0
EXOSC1-202ENST00000370885 SPG7Q9UQ90 795 aa15.04■□□□□ -0
EXOSC1-202ENST00000370885 TAF1LQ8IZX4 1826 aa15.03■□□□□ -0
EXOSC1-202ENST00000370885 UTRNP46939 3433 aa15.03■□□□□ -0
EXOSC1-202ENST00000370885 PALLDQ8WX93 1383 aa15.03■□□□□ -0
EXOSC1-202ENST00000370885 SMIM5Q71RC9 77 aa15.03■□□□□ -0
EXOSC1-202ENST00000370885 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
EXOSC1-202ENST00000370885 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
EXOSC1-202ENST00000370885 C5P01031 1676 aa15.02□□□□□ -0.01
EXOSC1-202ENST00000370885 MTHFSP49914 203 aa15.01□□□□□ -0.01
EXOSC1-202ENST00000370885 COL23A1Q86Y22 540 aaPredicted RBP15.01□□□□□ -0.01
EXOSC1-202ENST00000370885 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
EXOSC1-202ENST00000370885 TFCP2L1Q9NZI6 479 aa15.01□□□□□ -0.01
EXOSC1-202ENST00000370885 ASAP1Q9ULH1 1129 aa15.01□□□□□ -0.01
EXOSC1-202ENST00000370885 FHDC1Q9C0D6 1143 aaPredicted RBP15□□□□□ -0.01
EXOSC1-202ENST00000370885 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
EXOSC1-202ENST00000370885 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
EXOSC1-202ENST00000370885 SULT6B1Q6IMI4 303 aa14.99□□□□□ -0.01
EXOSC1-202ENST00000370885 SYT17Q9BSW7 474 aa14.99□□□□□ -0.01
EXOSC1-202ENST00000370885 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
EXOSC1-202ENST00000370885 KDRP35968 1356 aa14.98□□□□□ -0.01
EXOSC1-202ENST00000370885 GOLGB1Q14789 3259 aaKnown RBP14.98□□□□□ -0.01
EXOSC1-202ENST00000370885 ITPK1Q13572 414 aa14.98□□□□□ -0.01
EXOSC1-202ENST00000370885 SLC4A9Q96Q91 983 aa14.98□□□□□ -0.01
EXOSC1-202ENST00000370885 ARXQ96QS3 562 aa14.98□□□□□ -0.01
EXOSC1-202ENST00000370885 C4BP0C0L5 1744 aa14.97□□□□□ -0.01
EXOSC1-202ENST00000370885 ZNF530Q6P9A1 599 aaPredicted RBP14.97□□□□□ -0.01
EXOSC1-202ENST00000370885 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
EXOSC1-202ENST00000370885 TMOD3Q9NYL9 352 aa14.97□□□□□ -0.01
EXOSC1-202ENST00000370885 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.01
EXOSC1-202ENST00000370885 LOC102724428A0A0B4J2F2 783 aa14.96□□□□□ -0.01
EXOSC1-202ENST00000370885 SIK1P57059 783 aa14.96□□□□□ -0.01
EXOSC1-202ENST00000370885 PLEKHO1Q53GL0 409 aaPredicted RBP14.96□□□□□ -0.01
EXOSC1-202ENST00000370885 SLC16A10Q8TF71 515 aa14.96□□□□□ -0.01
EXOSC1-202ENST00000370885 SMARCC1Q92922 1105 aaPredicted RBP14.96□□□□□ -0.01
EXOSC1-202ENST00000370885 PLEKHG2Q9H7P9 1386 aa14.96□□□□□ -0.02
EXOSC1-202ENST00000370885 UBR3Q6ZT12 1888 aa14.95□□□□□ -0.02
EXOSC1-202ENST00000370885 MSL1Q68DK7 614 aa14.95□□□□□ -0.02
EXOSC1-202ENST00000370885 NPC1L1Q9UHC9 1359 aa14.95□□□□□ -0.02
EXOSC1-202ENST00000370885 HMOX1P09601 288 aa14.94□□□□□ -0.02
EXOSC1-202ENST00000370885 DCAF5Q96JK2 942 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms