RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.53
RPF1-201ENST00000370654 ZCRB1Q8TBF4 217 aaKnown RBP18.39■□□□□ 0.53
RPF1-201ENST00000370654 SGIP1Q9BQI5 828 aa18.39■□□□□ 0.53
RPF1-201ENST00000370654 DOT1LQ8TEK3 1739 aa18.38■□□□□ 0.53
RPF1-201ENST00000370654 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
RPF1-201ENST00000370654 SYTL4Q96C24 671 aaPredicted RBP18.37■□□□□ 0.53
RPF1-201ENST00000370654 EMILIN1Q9Y6C2 1016 aa18.37■□□□□ 0.53
RPF1-201ENST00000370654 NSD3Q9BZ95 1437 aa18.37■□□□□ 0.53
RPF1-201ENST00000370654 MTFR1LQ9H019 292 aa18.35■□□□□ 0.53
RPF1-201ENST00000370654 INSRP06213 1382 aa18.35■□□□□ 0.53
RPF1-201ENST00000370654 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
RPF1-201ENST00000370654 FHDC1Q9C0D6 1143 aaPredicted RBP18.34■□□□□ 0.53
RPF1-201ENST00000370654 FLT4P35916 1363 aa18.32■□□□□ 0.52
RPF1-201ENST00000370654 YY1P25490 414 aa18.32■□□□□ 0.52
RPF1-201ENST00000370654 TIMELESSQ9UNS1 1208 aa18.32■□□□□ 0.52
RPF1-201ENST00000370654 TUBGCP6Q96RT7 1819 aa18.31■□□□□ 0.52
RPF1-201ENST00000370654 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
RPF1-201ENST00000370654 SYT17Q9BSW7 474 aa18.31■□□□□ 0.52
RPF1-201ENST00000370654 LY75O60449 1722 aa18.31■□□□□ 0.52
RPF1-201ENST00000370654 PNPLA7Q6ZV29 1317 aa18.31■□□□□ 0.52
RPF1-201ENST00000370654 RAPGEF4Q8WZA2 1011 aa18.3■□□□□ 0.52
RPF1-201ENST00000370654 TATP17735 454 aaPredicted RBP18.3■□□□□ 0.52
RPF1-201ENST00000370654 POLR3GLQ9BT43 218 aa18.3■□□□□ 0.52
RPF1-201ENST00000370654 SMG6Q86US8 1419 aaKnown RBP18.29■□□□□ 0.52
RPF1-201ENST00000370654 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
RPF1-201ENST00000370654 CYP27B1O15528 508 aa18.29■□□□□ 0.52
RPF1-201ENST00000370654 CLSPNQ9HAW4 1339 aa18.28■□□□□ 0.52
RPF1-201ENST00000370654 ARXQ96QS3 562 aa18.28■□□□□ 0.52
RPF1-201ENST00000370654 CGNL1Q0VF96 1302 aa18.27■□□□□ 0.52
RPF1-201ENST00000370654 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.52
RPF1-201ENST00000370654 CCNL1Q9UK58 526 aaPredicted RBP18.27■□□□□ 0.51
RPF1-201ENST00000370654 TOGARAM1Q9Y4F4 1720 aa18.27■□□□□ 0.51
RPF1-201ENST00000370654 NCAPD2Q15021 1401 aa18.26■□□□□ 0.51
RPF1-201ENST00000370654 QSER1Q2KHR3 1735 aa18.26■□□□□ 0.51
RPF1-201ENST00000370654 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
RPF1-201ENST00000370654 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
RPF1-201ENST00000370654 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
RPF1-201ENST00000370654 POLKQ9UBT6 870 aa18.26■□□□□ 0.51
RPF1-201ENST00000370654 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
RPF1-201ENST00000370654 EYA1Q99502 592 aa18.25■□□□□ 0.51
RPF1-201ENST00000370654 WASHC2AQ641Q2 1341 aa18.25■□□□□ 0.51
RPF1-201ENST00000370654 PCDH11XQ9BZA7 1347 aa18.25■□□□□ 0.51
RPF1-201ENST00000370654 PCDH11YQ9BZA8 1340 aa18.25■□□□□ 0.51
RPF1-201ENST00000370654 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
RPF1-201ENST00000370654 COL24A1Q17RW2 1714 aa18.23■□□□□ 0.51
RPF1-201ENST00000370654 PKD1L3Q7Z443 1732 aa18.23■□□□□ 0.51
RPF1-201ENST00000370654 MPRIPQ6WCQ1 1025 aa18.23■□□□□ 0.51
RPF1-201ENST00000370654 COL23A1Q86Y22 540 aaPredicted RBP18.23■□□□□ 0.51
RPF1-201ENST00000370654 UTRNP46939 3433 aa18.23■□□□□ 0.51
RPF1-201ENST00000370654 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
RPF1-201ENST00000370654 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
RPF1-201ENST00000370654 SLC16A10Q8TF71 515 aa18.21■□□□□ 0.51
RPF1-201ENST00000370654 ITGB4P16144 1822 aa18.21■□□□□ 0.51
RPF1-201ENST00000370654 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
RPF1-201ENST00000370654 MAP3K5Q99683 1374 aa18.2■□□□□ 0.5
RPF1-201ENST00000370654 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.5
RPF1-201ENST00000370654 SMIM5Q71RC9 77 aa18.2■□□□□ 0.5
RPF1-201ENST00000370654 PIGBQ92521 554 aa18.2■□□□□ 0.5
RPF1-201ENST00000370654 PANK3Q9H999 370 aa18.2■□□□□ 0.5
RPF1-201ENST00000370654 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
RPF1-201ENST00000370654 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
RPF1-201ENST00000370654 NKX1-1Q15270 411 aaPredicted RBP18.18■□□□□ 0.5
RPF1-201ENST00000370654 MSL1Q68DK7 614 aa18.18■□□□□ 0.5
RPF1-201ENST00000370654 NLGN2Q8NFZ4 835 aa18.18■□□□□ 0.5
RPF1-201ENST00000370654 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
RPF1-201ENST00000370654 C5P01031 1676 aa18.18■□□□□ 0.5
RPF1-201ENST00000370654 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
RPF1-201ENST00000370654 MSH5O43196 834 aa18.17■□□□□ 0.5
RPF1-201ENST00000370654 POLD1P28340 1107 aa18.16■□□□□ 0.5
RPF1-201ENST00000370654 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
RPF1-201ENST00000370654 PHKG2P15735 406 aa18.15■□□□□ 0.5
RPF1-201ENST00000370654 SPG7Q9UQ90 795 aa18.15■□□□□ 0.5
RPF1-201ENST00000370654 ZNF784Q8NCA9 323 aaPredicted RBP18.14■□□□□ 0.49
RPF1-201ENST00000370654 ASAP1Q9ULH1 1129 aa18.14■□□□□ 0.49
RPF1-201ENST00000370654 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
RPF1-201ENST00000370654 GPR162Q16538 588 aa18.12■□□□□ 0.49
RPF1-201ENST00000370654 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
RPF1-201ENST00000370654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
RPF1-201ENST00000370654 IGSF1Q8N6C5 1336 aa18.11■□□□□ 0.49
RPF1-201ENST00000370654 ITPK1Q13572 414 aa18.11■□□□□ 0.49
RPF1-201ENST00000370654 SMARCC1Q92922 1105 aaPredicted RBP18.11■□□□□ 0.49
RPF1-201ENST00000370654 LOC102724428A0A0B4J2F2 783 aa18.1■□□□□ 0.49
RPF1-201ENST00000370654 SIK1P57059 783 aa18.1■□□□□ 0.49
RPF1-201ENST00000370654 AEBP1Q8IUX7 1158 aa18.1■□□□□ 0.49
RPF1-201ENST00000370654 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
RPF1-201ENST00000370654 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
RPF1-201ENST00000370654 ATG3Q9NT62 314 aa18.1■□□□□ 0.49
RPF1-201ENST00000370654 PHF14O94880 888 aa18.09■□□□□ 0.49
RPF1-201ENST00000370654 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.494e-6■□□□□ 8.3
RPF1-201ENST00000370654 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
RPF1-201ENST00000370654 CHD4Q14839 1912 aa18.09■□□□□ 0.49
RPF1-201ENST00000370654 UBR3Q6ZT12 1888 aa18.08■□□□□ 0.49
RPF1-201ENST00000370654 AK7Q96M32 723 aa18.08■□□□□ 0.49
RPF1-201ENST00000370654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.07■□□□□ 0.48
RPF1-201ENST00000370654 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
RPF1-201ENST00000370654 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
RPF1-201ENST00000370654 GOLGB1Q14789 3259 aaKnown RBP18.07■□□□□ 0.48
RPF1-201ENST00000370654 KDM6AO15550 1401 aaPredicted RBP18.05■□□□□ 0.48
RPF1-201ENST00000370654 KIF7Q2M1P5 1343 aa18.05■□□□□ 0.48
RPF1-201ENST00000370654 ATP6V1AP38606 617 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms