RNA–Protein interactions for RNA: ENST00000370341.3

LINC00029-201, long intergenic non-protein coding RNA 29, humanhuman

TSL 1 (best) BASIC

Gene LINC00029, Length 1,631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00029-201ENST00000370341 PLCH1Q4KWH8 1693 aa22.41■■□□□ 1.18
LINC00029-201ENST00000370341 RTF1Q92541 710 aaKnown RBP22.41■■□□□ 1.18
LINC00029-201ENST00000370341 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
LINC00029-201ENST00000370341 IL16Q14005 1332 aa22.4■■□□□ 1.18
LINC00029-201ENST00000370341 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.18
LINC00029-201ENST00000370341 TRMT2AQ8IZ69 625 aaKnown RBP22.39■■□□□ 1.18
LINC00029-201ENST00000370341 GNAT3A8MTJ3 354 aa22.39■■□□□ 1.17
LINC00029-201ENST00000370341 HTATSF1O43719 755 aaKnown RBP22.39■■□□□ 1.17
LINC00029-201ENST00000370341 MYH16Q9H6N6 1097 aa22.39■■□□□ 1.17
LINC00029-201ENST00000370341 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
LINC00029-201ENST00000370341 MAP3K5Q99683 1374 aa22.37■■□□□ 1.17
LINC00029-201ENST00000370341 DCTN1Q14203 1278 aa22.37■■□□□ 1.17
LINC00029-201ENST00000370341 ZNF530Q6P9A1 599 aaPredicted RBP22.37■■□□□ 1.17
LINC00029-201ENST00000370341 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
LINC00029-201ENST00000370341 MEGF6O75095 1541 aa22.37■■□□□ 1.17
LINC00029-201ENST00000370341 NWD2Q9ULI1 1742 aa22.36■■□□□ 1.17
LINC00029-201ENST00000370341 NGLY1Q96IV0 654 aa22.36■■□□□ 1.17
LINC00029-201ENST00000370341 C8orf37Q96NL8 207 aa22.36■■□□□ 1.17
LINC00029-201ENST00000370341 SPG7Q9UQ90 795 aa22.36■■□□□ 1.17
LINC00029-201ENST00000370341 C1orf141Q5JVX7 400 aa22.35■■□□□ 1.17
LINC00029-201ENST00000370341 MCM10Q7L590 875 aa22.35■■□□□ 1.17
LINC00029-201ENST00000370341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.17
LINC00029-201ENST00000370341 SLIT2O94813 1529 aa22.35■■□□□ 1.17
LINC00029-201ENST00000370341 AKAP4Q5JQC9 854 aa22.35■■□□□ 1.17
LINC00029-201ENST00000370341 MEX3CQ5U5Q3 659 aaKnown RBP22.35■■□□□ 1.17
LINC00029-201ENST00000370341 USP35Q9P2H5 1018 aa22.35■■□□□ 1.17
LINC00029-201ENST00000370341 NRAPQ86VF7 1730 aa22.34■■□□□ 1.17
LINC00029-201ENST00000370341 IL2RBP14784 551 aa22.34■■□□□ 1.17
LINC00029-201ENST00000370341 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
LINC00029-201ENST00000370341 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.17
LINC00029-201ENST00000370341 PARP4Q9UKK3 1724 aaKnown RBP22.33■■□□□ 1.16
LINC00029-201ENST00000370341 OVOS2A0A0G2JMS6 1433 aa22.32■■□□□ 1.16
LINC00029-201ENST00000370341 GNAI1P63096 354 aa22.32■■□□□ 1.16
LINC00029-201ENST00000370341 UNC5CLQ8IV45 518 aa22.31■■□□□ 1.16
LINC00029-201ENST00000370341 FNBP4Q8N3X1 1017 aaPredicted RBP22.31■■□□□ 1.16
LINC00029-201ENST00000370341 FANCIQ9NVI1 1328 aa22.3■■□□□ 1.16
LINC00029-201ENST00000370341 CFAP44Q96MT7 982 aa22.3■■□□□ 1.16
LINC00029-201ENST00000370341 PKD1L3Q7Z443 1732 aa22.29■■□□□ 1.16
LINC00029-201ENST00000370341 IL17REQ8NFR9 667 aa22.29■■□□□ 1.16
LINC00029-201ENST00000370341 ZCRB1Q8TBF4 217 aaKnown RBP22.29■■□□□ 1.16
LINC00029-201ENST00000370341 TSR2Q969E8 191 aaKnown RBP22.29■■□□□ 1.16
LINC00029-201ENST00000370341 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
LINC00029-201ENST00000370341 ZNF853P0CG23 659 aa22.28■■□□□ 1.16
LINC00029-201ENST00000370341 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
LINC00029-201ENST00000370341 THRAP3Q9Y2W1 955 aaKnown RBP22.28■■□□□ 1.16
LINC00029-201ENST00000370341 CCDC9Q9Y3X0 531 aaKnown RBP22.28■■□□□ 1.16
LINC00029-201ENST00000370341 SPATA31A1Q5TZJ5 1347 aa22.28■■□□□ 1.16
LINC00029-201ENST00000370341 RCAN3Q9UKA8 241 aa22.28■■□□□ 1.16
LINC00029-201ENST00000370341 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
LINC00029-201ENST00000370341 PHKG2P15735 406 aa22.27■■□□□ 1.16
LINC00029-201ENST00000370341 MPRIPQ6WCQ1 1025 aa22.27■■□□□ 1.16
LINC00029-201ENST00000370341 AFF2P51816 1311 aa22.27■■□□□ 1.15
LINC00029-201ENST00000370341 SPATA31A5Q5VU36 1347 aa22.27■■□□□ 1.15
LINC00029-201ENST00000370341 SPATA31A7Q8IWB4 1347 aa22.27■■□□□ 1.15
LINC00029-201ENST00000370341 USP21Q9UK80 565 aa22.26■■□□□ 1.15
LINC00029-201ENST00000370341 PCDH11XQ9BZA7 1347 aa22.26■■□□□ 1.15
LINC00029-201ENST00000370341 PCDH11YQ9BZA8 1340 aa22.26■■□□□ 1.15
LINC00029-201ENST00000370341 RNMTO43148 476 aaKnown RBP22.25■■□□□ 1.15
LINC00029-201ENST00000370341 LGR6Q9HBX8 967 aa22.25■■□□□ 1.15
LINC00029-201ENST00000370341 LRRC37A3O60309 1634 aa22.25■■□□□ 1.15
LINC00029-201ENST00000370341 CEMIPQ8WUJ3 1361 aa22.25■■□□□ 1.15
LINC00029-201ENST00000370341 HSP90AB1P08238 724 aaKnown RBP22.24■■□□□ 1.15
LINC00029-201ENST00000370341 VPS72Q15906 364 aa22.24■■□□□ 1.15
LINC00029-201ENST00000370341 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
LINC00029-201ENST00000370341 DISP2A7MBM2 1401 aa22.24■■□□□ 1.15
LINC00029-201ENST00000370341 CHL1O00533 1208 aa22.24■■□□□ 1.15
LINC00029-201ENST00000370341 CYP27B1O15528 508 aa22.24■■□□□ 1.15
LINC00029-201ENST00000370341 CDCA7Q9BWT1 371 aaPredicted RBP22.24■■□□□ 1.15
LINC00029-201ENST00000370341 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
LINC00029-201ENST00000370341 TEFQ10587 303 aa22.23■■□□□ 1.15
LINC00029-201ENST00000370341 TAF7Q15545 349 aaPredicted RBP22.22■■□□□ 1.15
LINC00029-201ENST00000370341 DDX54Q8TDD1 881 aaKnown RBP22.21■■□□□ 1.15
LINC00029-201ENST00000370341 TSPYL4Q9UJ04 414 aa22.21■■□□□ 1.15
LINC00029-201ENST00000370341 WNK3Q9BYP7 1800 aa22.21■■□□□ 1.15
LINC00029-201ENST00000370341 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.21■■□□□ 1.15
LINC00029-201ENST00000370341 CT47B1P0C2W7 299 aaPredicted RBP22.2■■□□□ 1.15
LINC00029-201ENST00000370341 DCAF5Q96JK2 942 aa22.2■■□□□ 1.15
LINC00029-201ENST00000370341 BABAM1Q9NWV8 329 aa22.2■■□□□ 1.15
LINC00029-201ENST00000370341 EXOC5O00471 708 aa22.2■■□□□ 1.14
LINC00029-201ENST00000370341 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
LINC00029-201ENST00000370341 MIS18AQ9NYP9 233 aa22.2■■□□□ 1.14
LINC00029-201ENST00000370341 VIRMAQ69YN4 1812 aaKnown RBP22.19■■□□□ 1.14
LINC00029-201ENST00000370341 ADAMTS7Q9UKP4 1686 aa22.19■■□□□ 1.14
LINC00029-201ENST00000370341 KDM6AO15550 1401 aaPredicted RBP22.18■■□□□ 1.14
LINC00029-201ENST00000370341 SCN11AQ9UI33 1791 aa22.17■■□□□ 1.14
LINC00029-201ENST00000370341 SHANK3Q9BYB0 1731 aa22.17■■□□□ 1.14
LINC00029-201ENST00000370341 NEFLP07196 543 aa22.17■■□□□ 1.14
LINC00029-201ENST00000370341 NKX1-1Q15270 411 aaPredicted RBP22.16■■□□□ 1.14
LINC00029-201ENST00000370341 RGS17Q9UGC6 210 aaPredicted RBP22.16■■□□□ 1.14
LINC00029-201ENST00000370341 ATRNO75882 1429 aa22.16■■□□□ 1.14
LINC00029-201ENST00000370341 BTBD11A6QL63 1104 aa22.15■■□□□ 1.14
LINC00029-201ENST00000370341 DDB1Q16531 1140 aa22.15■■□□□ 1.14
LINC00029-201ENST00000370341 FAM98CQ17RN3 349 aaKnown RBP22.14■■□□□ 1.14
LINC00029-201ENST00000370341 TNS2Q63HR2 1409 aa22.14■■□□□ 1.14
LINC00029-201ENST00000370341 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.14
LINC00029-201ENST00000370341 TRPC5Q9UL62 973 aaPredicted RBP22.14■■□□□ 1.14
LINC00029-201ENST00000370341 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.13
LINC00029-201ENST00000370341 RARSP54136 660 aaKnown RBP22.13■■□□□ 1.13
LINC00029-201ENST00000370341 ZNF772Q68DY9 489 aaPredicted RBP22.13■■□□□ 1.13
LINC00029-201ENST00000370341 C8orf58Q8NAV2 365 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms