RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
COL11A1-203ENST00000370096 MAP3K11Q16584 847 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 LUZP1Q86V48 1076 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 CPLX3Q8WVH0 158 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
COL11A1-203ENST00000370096 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 TMCO5BA8MYB1 307 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 ATP2C2O75185 946 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 DESP17661 470 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 PPP4R3BQ5MIZ7 849 aa12.99□□□□□ -0.33
COL11A1-203ENST00000370096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL11A1-203ENST00000370096 MCM4P33991 863 aa12.99□□□□□ -0.33
COL11A1-203ENST00000370096 MACROD2A1Z1Q3 448 aa12.99□□□□□ -0.33
COL11A1-203ENST00000370096 KIF5CO60282 957 aa12.99□□□□□ -0.33
COL11A1-203ENST00000370096 BLOC1S2Q6QNY1 142 aa12.99□□□□□ -0.33
COL11A1-203ENST00000370096 AACSQ86V21 672 aa12.99□□□□□ -0.33
COL11A1-203ENST00000370096 CASTP20810 708 aaKnown RBP12.99□□□□□ -0.33
COL11A1-203ENST00000370096 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
COL11A1-203ENST00000370096 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
COL11A1-203ENST00000370096 TDO2P48775 406 aa12.98□□□□□ -0.33
COL11A1-203ENST00000370096 NACAP1Q9BZK3 213 aa12.98□□□□□ -0.33
COL11A1-203ENST00000370096 GNL3LQ9NVN8 582 aaKnown RBP12.98□□□□□ -0.33
COL11A1-203ENST00000370096 MAP9Q49MG5 647 aa12.98□□□□□ -0.33
COL11A1-203ENST00000370096 FERMT3Q86UX7 667 aa12.98□□□□□ -0.33
COL11A1-203ENST00000370096 UBA5Q9GZZ9 404 aa12.98□□□□□ -0.33
COL11A1-203ENST00000370096 CNTLNQ9NXG0 1405 aa12.98□□□□□ -0.33
COL11A1-203ENST00000370096 SMC1AQ14683 1233 aaKnown RBP12.97□□□□□ -0.33
COL11A1-203ENST00000370096 ZSCAN29Q8IWY8 852 aaPredicted RBP12.97□□□□□ -0.33
COL11A1-203ENST00000370096 FAM107BQ9H098 131 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 GBP3Q9H0R5 595 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 ZSCAN30Q86W11 494 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 C16orf45Q96MC5 204 aaPredicted RBP12.97□□□□□ -0.33
COL11A1-203ENST00000370096 GUCY1B3Q02153 619 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 CACNA2D4Q7Z3S7 1137 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 AAMPQ13685 434 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
COL11A1-203ENST00000370096 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 KIF18AQ8NI77 898 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.33
COL11A1-203ENST00000370096 BACH2Q9BYV9 841 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 TMEM132EQ6IEE7 984 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 CCDC7Q96M83 1385 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.33
COL11A1-203ENST00000370096 MYZAPP0CAP1 466 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 SFPQP23246 707 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL11A1-203ENST00000370096 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.33
COL11A1-203ENST00000370096 LMAN1P49257 510 aa12.96□□□□□ -0.34
COL11A1-203ENST00000370096 NUP88Q99567 741 aaPredicted RBP12.96□□□□□ -0.34
COL11A1-203ENST00000370096 SPECC1Q5M775 1068 aa12.96□□□□□ -0.34
COL11A1-203ENST00000370096 LARP1Q6PKG0 1096 aaKnown RBP12.96□□□□□ -0.34
COL11A1-203ENST00000370096 MICALCLQ6ZW33 695 aa12.96□□□□□ -0.34
COL11A1-203ENST00000370096 PPM1EQ8WY54 764 aa12.96□□□□□ -0.34
COL11A1-203ENST00000370096 CCDC85AQ96PX6 553 aaPredicted RBP12.96□□□□□ -0.34
COL11A1-203ENST00000370096 NLRP6P59044 892 aa12.95□□□□□ -0.34
COL11A1-203ENST00000370096 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
COL11A1-203ENST00000370096 TDRD9Q8NDG6 1382 aaKnown RBP12.95□□□□□ -0.34
COL11A1-203ENST00000370096 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
COL11A1-203ENST00000370096 HLTFQ14527 1009 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL11A1-203ENST00000370096 IMMTQ16891 758 aaKnown RBP12.95□□□□□ -0.34
COL11A1-203ENST00000370096 ZSCAN12O43309 604 aa12.95□□□□□ -0.34
COL11A1-203ENST00000370096 CDKL5O76039 1030 aa12.95□□□□□ -0.34
COL11A1-203ENST00000370096 TOP1P11387 765 aaKnown RBP12.95□□□□□ -0.34
COL11A1-203ENST00000370096 CCDC175P0C221 793 aa12.95□□□□□ -0.34
COL11A1-203ENST00000370096 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
COL11A1-203ENST00000370096 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
COL11A1-203ENST00000370096 MAATS1Q7Z4T9 603 aa12.94□□□□□ -0.34
COL11A1-203ENST00000370096 DDX23Q9BUQ8 820 aaKnown RBP12.94□□□□□ -0.34
COL11A1-203ENST00000370096 LIG1P18858 919 aa12.94□□□□□ -0.34
COL11A1-203ENST00000370096 ATF3P18847 181 aa12.94□□□□□ -0.34
COL11A1-203ENST00000370096 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
COL11A1-203ENST00000370096 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 ZSWIM4Q9H7M6 989 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 CETN2P41208 172 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 PRPF4BQ13523 1007 aaKnown RBP12.93□□□□□ -0.34
COL11A1-203ENST00000370096 ISM2Q6H9L7 571 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 COMMD10Q9Y6G5 202 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 FKBP15Q5T1M5 1219 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
COL11A1-203ENST00000370096 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-203ENST00000370096 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
COL11A1-203ENST00000370096 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 CCDC96Q2M329 555 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 DRC1Q96MC2 740 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 CCDC160A6NGH7 325 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 HOOK3Q86VS8 718 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 MNAT1P51948 309 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 PPP6R1Q9UPN7 881 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
COL11A1-203ENST00000370096 CTNNA2P26232 953 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 GTF2A1P52655 376 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 TSG101Q99816 390 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 USP25Q9UHP3 1055 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 MCM3P25205 808 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms