RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 POLD1P28340 1107 aa21.96■■□□□ 1.11
SSR4-204ENST00000370087 IP6K1Q92551 441 aa21.96■■□□□ 1.11
SSR4-204ENST00000370087 PRIM1P49642 420 aaKnown RBP21.95■■□□□ 1.1
SSR4-204ENST00000370087 HDGFL2Q7Z4V5 671 aaPredicted RBP21.95■■□□□ 1.1
SSR4-204ENST00000370087 TFCP2L1Q9NZI6 479 aa21.95■■□□□ 1.1
SSR4-204ENST00000370087 C5P01031 1676 aa21.95■■□□□ 1.1
SSR4-204ENST00000370087 GIGYF1O75420 1035 aaPredicted RBP21.94■■□□□ 1.1
SSR4-204ENST00000370087 YBX3P16989 372 aaKnown RBP eCLIP21.94■■□□□ 1.14e-12■■■□□ 16.3
SSR4-204ENST00000370087 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
SSR4-204ENST00000370087 FBLN1P23142 703 aa21.93■■□□□ 1.1
SSR4-204ENST00000370087 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
SSR4-204ENST00000370087 MAP3K19Q56UN5 1328 aa21.91■■□□□ 1.1
SSR4-204ENST00000370087 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
SSR4-204ENST00000370087 HOXC9P31274 260 aa21.89■■□□□ 1.09
SSR4-204ENST00000370087 COL23A1Q86Y22 540 aaPredicted RBP21.89■■□□□ 1.09
SSR4-204ENST00000370087 TERF2IPQ9NYB0 399 aa21.89■■□□□ 1.09
SSR4-204ENST00000370087 MSL1Q68DK7 614 aa21.88■■□□□ 1.09
SSR4-204ENST00000370087 CCNL1Q9UK58 526 aaPredicted RBP21.88■■□□□ 1.09
SSR4-204ENST00000370087 TOGARAM1Q9Y4F4 1720 aa21.88■■□□□ 1.09
SSR4-204ENST00000370087 ZCRB1Q8TBF4 217 aaKnown RBP21.86■■□□□ 1.09
SSR4-204ENST00000370087 ATP10DQ9P241 1426 aa21.85■■□□□ 1.09
SSR4-204ENST00000370087 MSH5O43196 834 aa21.84■■□□□ 1.09
SSR4-204ENST00000370087 USHBP1Q8N6Y0 703 aa21.84■■□□□ 1.09
SSR4-204ENST00000370087 ITGB4P16144 1822 aa21.83■■□□□ 1.09
SSR4-204ENST00000370087 USP47Q96K76 1375 aa21.83■■□□□ 1.08
SSR4-204ENST00000370087 AMPHP49418 695 aa21.82■■□□□ 1.08
SSR4-204ENST00000370087 NBPF6Q5VWK0 638 aa21.82■■□□□ 1.08
SSR4-204ENST00000370087 COG3Q96JB2 828 aa21.82■■□□□ 1.08
SSR4-204ENST00000370087 NBPF4Q96M43 638 aa21.82■■□□□ 1.08
SSR4-204ENST00000370087 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
SSR4-204ENST00000370087 TESK2Q96S53 571 aa21.81■■□□□ 1.08
SSR4-204ENST00000370087 RTL1A6NKG5 1358 aa21.81■■□□□ 1.08
SSR4-204ENST00000370087 UBR3Q6ZT12 1888 aa21.81■■□□□ 1.08
SSR4-204ENST00000370087 GRIN3BO60391 1043 aa21.8■■□□□ 1.08
SSR4-204ENST00000370087 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
SSR4-204ENST00000370087 IFFO2Q5TF58 517 aa21.8■■□□□ 1.08
SSR4-204ENST00000370087 PUS7Q96PZ0 661 aaKnown RBP21.8■■□□□ 1.08
SSR4-204ENST00000370087 KIF20BQ96Q89 1820 aa21.8■■□□□ 1.08
SSR4-204ENST00000370087 AMIGO3Q86WK7 504 aa21.79■■□□□ 1.08
SSR4-204ENST00000370087 ADCY9O60503 1353 aa21.78■■□□□ 1.08
SSR4-204ENST00000370087 PKD1L3Q7Z443 1732 aa21.77■■□□□ 1.08
SSR4-204ENST00000370087 PALLDQ8WX93 1383 aa21.76■■□□□ 1.07
SSR4-204ENST00000370087 MAP2P11137 1827 aaKnown RBP21.76■■□□□ 1.07
SSR4-204ENST00000370087 SMIM5Q71RC9 77 aa21.75■■□□□ 1.07
SSR4-204ENST00000370087 ST20-MTHFSA0A0A6YYL1 179 aa21.74■■□□□ 1.07
SSR4-204ENST00000370087 CD2APQ9Y5K6 639 aa21.74■■□□□ 1.07
SSR4-204ENST00000370087 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
SSR4-204ENST00000370087 CGNL1Q0VF96 1302 aa21.73■■□□□ 1.07
SSR4-204ENST00000370087 SMG6Q86US8 1419 aaKnown RBP21.72■■□□□ 1.07
SSR4-204ENST00000370087 ZNF526Q8TF50 670 aaPredicted RBP21.72■■□□□ 1.07
SSR4-204ENST00000370087 RAPGEF4Q8WZA2 1011 aa21.72■■□□□ 1.07
SSR4-204ENST00000370087 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
SSR4-204ENST00000370087 FYB1O15117 783 aa21.71■■□□□ 1.07
SSR4-204ENST00000370087 HSP90AB2PQ58FF8 381 aa21.71■■□□□ 1.07
SSR4-204ENST00000370087 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
SSR4-204ENST00000370087 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
SSR4-204ENST00000370087 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
SSR4-204ENST00000370087 KIAA1551Q9HCM1 1747 aa21.7■■□□□ 1.06
SSR4-204ENST00000370087 CYP27B1O15528 508 aa21.7■■□□□ 1.06
SSR4-204ENST00000370087 TATP17735 454 aaPredicted RBP21.7■■□□□ 1.06
SSR4-204ENST00000370087 MPRIPQ6WCQ1 1025 aa21.7■■□□□ 1.06
SSR4-204ENST00000370087 GPBP1L1Q9HC44 474 aaPredicted RBP21.69■■□□□ 1.06
SSR4-204ENST00000370087 INSRP06213 1382 aa21.69■■□□□ 1.06
SSR4-204ENST00000370087 ANKRD26Q9UPS8 1709 aa21.69■■□□□ 1.06
SSR4-204ENST00000370087 IGSF1Q8N6C5 1336 aa21.68■■□□□ 1.06
SSR4-204ENST00000370087 CICQ96RK0 1608 aaPredicted RBP21.68■■□□□ 1.06
SSR4-204ENST00000370087 PHF14O94880 888 aa21.67■■□□□ 1.06
SSR4-204ENST00000370087 FLT4P35916 1363 aa21.66■■□□□ 1.06
SSR4-204ENST00000370087 FLAD1Q8NFF5 587 aa21.66■■□□□ 1.06
SSR4-204ENST00000370087 NCAPD2Q15021 1401 aa21.65■■□□□ 1.06
SSR4-204ENST00000370087 KIF13BQ9NQT8 1826 aa21.65■■□□□ 1.06
SSR4-204ENST00000370087 HSPA6P17066 643 aa21.65■■□□□ 1.06
SSR4-204ENST00000370087 AK7Q96M32 723 aa21.65■■□□□ 1.06
SSR4-204ENST00000370087 N4BP2Q86UW6 1770 aaPredicted RBP21.64■■□□□ 1.06
SSR4-204ENST00000370087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.64■■□□□ 1.05
SSR4-204ENST00000370087 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
SSR4-204ENST00000370087 PIGBQ92521 554 aa21.63■■□□□ 1.05
SSR4-204ENST00000370087 EMILIN1Q9Y6C2 1016 aa21.61■■□□□ 1.05
SSR4-204ENST00000370087 KIF3CO14782 793 aa21.6■■□□□ 1.05
SSR4-204ENST00000370087 SMARCC1Q92922 1105 aaPredicted RBP21.6■■□□□ 1.05
SSR4-204ENST00000370087 KIF24Q5T7B8 1368 aa21.6■■□□□ 1.05
SSR4-204ENST00000370087 ITPK1Q13572 414 aa21.59■■□□□ 1.05
SSR4-204ENST00000370087 NSD3Q9BZ95 1437 aa21.59■■□□□ 1.05
SSR4-204ENST00000370087 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.05
SSR4-204ENST00000370087 NKX1-1Q15270 411 aaPredicted RBP21.58■■□□□ 1.05
SSR4-204ENST00000370087 LOC102724428A0A0B4J2F2 783 aa21.57■■□□□ 1.04
SSR4-204ENST00000370087 SSFA2P28290 1259 aa21.57■■□□□ 1.04
SSR4-204ENST00000370087 SIK1P57059 783 aa21.57■■□□□ 1.04
SSR4-204ENST00000370087 BRCA1P38398 1863 aaKnown RBP21.57■■□□□ 1.04
SSR4-204ENST00000370087 COL5A3P25940 1745 aaPredicted RBP21.56■■□□□ 1.04
SSR4-204ENST00000370087 CARD14Q9BXL6 1004 aa21.56■■□□□ 1.04
SSR4-204ENST00000370087 ASAP1Q9ULH1 1129 aa21.56■■□□□ 1.04
SSR4-204ENST00000370087 TMF1P82094 1093 aa21.55■■□□□ 1.04
SSR4-204ENST00000370087 GNPATO15228 680 aa21.54■■□□□ 1.04
SSR4-204ENST00000370087 C4AP0C0L4 1744 aa21.54■■□□□ 1.04
SSR4-204ENST00000370087 KDRP35968 1356 aa21.52■■□□□ 1.04
SSR4-204ENST00000370087 MMP10P09238 476 aa21.52■■□□□ 1.04
SSR4-204ENST00000370087 HMGB2P26583 209 aaKnown RBP21.52■■□□□ 1.04
SSR4-204ENST00000370087 ZNF831Q5JPB2 1677 aa21.52■■□□□ 1.04
SSR4-204ENST00000370087 SLC24A1O60721 1099 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms