RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 USHBP1Q8N6Y0 703 aa28.19■■■□□ 2.1
SMNDC1-201ENST00000369592 KNSTRNQ9Y448 316 aa28.19■■■□□ 2.1
SMNDC1-201ENST00000369592 KCNQ2O43526 872 aa28.17■■■□□ 2.1
SMNDC1-201ENST00000369592 YY1P25490 414 aa28.16■■■□□ 2.1
SMNDC1-201ENST00000369592 PPM1GO15355 546 aaPredicted RBP28.15■■■□□ 2.1
SMNDC1-201ENST00000369592 TNNT2P45379 298 aaPredicted RBP28.15■■■□□ 2.1
SMNDC1-201ENST00000369592 ZCRB1Q8TBF4 217 aaKnown RBP28.15■■■□□ 2.1
SMNDC1-201ENST00000369592 KAT6BQ8WYB5 2073 aa28.15■■■□□ 2.1
SMNDC1-201ENST00000369592 PROM2Q8N271 834 aa28.14■■■□□ 2.1
SMNDC1-201ENST00000369592 MORC1Q86VD1 984 aa28.13■■■□□ 2.09
SMNDC1-201ENST00000369592 EYA1Q99502 592 aa28.13■■■□□ 2.09
SMNDC1-201ENST00000369592 BTAF1O14981 1849 aa28.13■■■□□ 2.09
SMNDC1-201ENST00000369592 PKD1L3Q7Z443 1732 aa28.12■■■□□ 2.09
SMNDC1-201ENST00000369592 EIF4A2Q14240 407 aaKnown RBP28.12■■■□□ 2.09
SMNDC1-201ENST00000369592 DDX54Q8TDD1 881 aaKnown RBP28.12■■■□□ 2.09
SMNDC1-201ENST00000369592 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
SMNDC1-201ENST00000369592 RAPGEF4Q8WZA2 1011 aa28.11■■■□□ 2.09
SMNDC1-201ENST00000369592 ACSBG1Q96GR2 724 aa28.1■■■□□ 2.09
SMNDC1-201ENST00000369592 TATP17735 454 aaPredicted RBP28.09■■■□□ 2.09
SMNDC1-201ENST00000369592 DOT1LQ8TEK3 1739 aa28.08■■■□□ 2.09
SMNDC1-201ENST00000369592 IGSF1Q8N6C5 1336 aa28.06■■■□□ 2.08
SMNDC1-201ENST00000369592 PLEKHG2Q9H7P9 1386 aa28.05■■■□□ 2.08
SMNDC1-201ENST00000369592 CYP27B1O15528 508 aa28.03■■■□□ 2.08
SMNDC1-201ENST00000369592 TXNRD1Q16881 649 aa28.03■■■□□ 2.08
SMNDC1-201ENST00000369592 PCDH11XQ9BZA7 1347 aa28.02■■■□□ 2.08
SMNDC1-201ENST00000369592 PCDH11YQ9BZA8 1340 aa28.02■■■□□ 2.08
SMNDC1-201ENST00000369592 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.082e-7■■□□□ 14
SMNDC1-201ENST00000369592 PRIM1P49642 420 aaKnown RBP28■■■□□ 2.07
SMNDC1-201ENST00000369592 NBPF14Q5TI25 921 aa28■■■□□ 2.07
SMNDC1-201ENST00000369592 ANO8Q9HCE9 1232 aaPredicted RBP28■■■□□ 2.07
SMNDC1-201ENST00000369592 PAPPAQ13219 1627 aa28■■■□□ 2.07
SMNDC1-201ENST00000369592 TOGARAM1Q9Y4F4 1720 aa27.99■■■□□ 2.07
SMNDC1-201ENST00000369592 NKX1-1Q15270 411 aaPredicted RBP27.99■■■□□ 2.07
SMNDC1-201ENST00000369592 IL13P35225 146 aa27.98■■■□□ 2.07
SMNDC1-201ENST00000369592 CC2D1BQ5T0F9 858 aaKnown RBP27.98■■■□□ 2.07
SMNDC1-201ENST00000369592 LY75O60449 1722 aa27.97■■■□□ 2.07
SMNDC1-201ENST00000369592 ITGB4P16144 1822 aa27.95■■■□□ 2.07
SMNDC1-201ENST00000369592 MTHFSP49914 203 aa27.95■■■□□ 2.06
SMNDC1-201ENST00000369592 KDRP35968 1356 aa27.95■■■□□ 2.06
SMNDC1-201ENST00000369592 PPP1R1BQ9UD71 204 aaPredicted RBP27.94■■■□□ 2.06
SMNDC1-201ENST00000369592 SPG7Q9UQ90 795 aa27.94■■■□□ 2.06
SMNDC1-201ENST00000369592 CASZ1Q86V15 1759 aa27.94■■■□□ 2.06
SMNDC1-201ENST00000369592 LRRC4BQ9NT99 713 aa27.93■■■□□ 2.06
SMNDC1-201ENST00000369592 COL3A1P02461 1466 aaPredicted RBP27.9■■■□□ 2.06
SMNDC1-201ENST00000369592 AEBP1Q8IUX7 1158 aa27.9■■■□□ 2.06
SMNDC1-201ENST00000369592 DCAF8L1A6NGE4 600 aa27.89■■■□□ 2.06
SMNDC1-201ENST00000369592 PHKG2P15735 406 aa27.89■■■□□ 2.06
SMNDC1-201ENST00000369592 SYTL4Q96C24 671 aaPredicted RBP27.89■■■□□ 2.06
SMNDC1-201ENST00000369592 SLC27A3Q5K4L6 730 aa27.88■■■□□ 2.05
SMNDC1-201ENST00000369592 SPON1Q9HCB6 807 aa27.88■■■□□ 2.05
SMNDC1-201ENST00000369592 SLC15A2Q16348 729 aa27.87■■■□□ 2.05
SMNDC1-201ENST00000369592 IFNL2Q8IZJ0 200 aa27.87■■■□□ 2.05
SMNDC1-201ENST00000369592 SULT6B1Q6IMI4 303 aa27.84■■■□□ 2.05
SMNDC1-201ENST00000369592 PDGFDQ9GZP0 370 aaPredicted RBP27.84■■■□□ 2.05
SMNDC1-201ENST00000369592 STK32BQ9NY57 414 aa27.84■■■□□ 2.05
SMNDC1-201ENST00000369592 AKT1S1Q96B36 256 aa27.83■■■□□ 2.05
SMNDC1-201ENST00000369592 QSER1Q2KHR3 1735 aa27.83■■■□□ 2.05
SMNDC1-201ENST00000369592 AMOTQ4VCS5 1084 aa27.82■■■□□ 2.04
SMNDC1-201ENST00000369592 PLEKHO1Q53GL0 409 aaPredicted RBP27.82■■■□□ 2.04
SMNDC1-201ENST00000369592 PIGBQ92521 554 aa27.82■■■□□ 2.04
SMNDC1-201ENST00000369592 ZNF827Q17R98 1081 aa27.81■■■□□ 2.04
SMNDC1-201ENST00000369592 DIAPH1O60610 1272 aaKnown RBP27.8■■■□□ 2.04
SMNDC1-201ENST00000369592 MPRIPQ6WCQ1 1025 aa27.8■■■□□ 2.04
SMNDC1-201ENST00000369592 TAF1LQ8IZX4 1826 aa27.79■■■□□ 2.04
SMNDC1-201ENST00000369592 TUBGCP6Q96RT7 1819 aa27.78■■■□□ 2.04
SMNDC1-201ENST00000369592 KDM6AO15550 1401 aaPredicted RBP27.78■■■□□ 2.04
SMNDC1-201ENST00000369592 KCNQ4P56696 695 aa27.78■■■□□ 2.04
SMNDC1-201ENST00000369592 PALLDQ8WX93 1383 aa27.76■■■□□ 2.03
SMNDC1-201ENST00000369592 ZNF530Q6P9A1 599 aaPredicted RBP27.76■■■□□ 2.03
SMNDC1-201ENST00000369592 CCNL1Q9UK58 526 aaPredicted RBP27.76■■■□□ 2.03
SMNDC1-201ENST00000369592 HSP90AB1P08238 724 aaKnown RBP27.75■■■□□ 2.03
SMNDC1-201ENST00000369592 PPP2R1AP30153 589 aa27.75■■■□□ 2.03
SMNDC1-201ENST00000369592 CNGB1Q14028 1251 aaPredicted RBP27.75■■■□□ 2.03
SMNDC1-201ENST00000369592 DCAF5Q96JK2 942 aa27.75■■■□□ 2.03
SMNDC1-201ENST00000369592 C5P01031 1676 aa27.75■■■□□ 2.03
SMNDC1-201ENST00000369592 ERVV-2B6SEH9 535 aa27.74■■■□□ 2.03
SMNDC1-201ENST00000369592 SMARCC1Q92922 1105 aaPredicted RBP27.74■■■□□ 2.03
SMNDC1-201ENST00000369592 SCN11AQ9UI33 1791 aa27.73■■■□□ 2.03
SMNDC1-201ENST00000369592 HMOX1P09601 288 aa27.72■■■□□ 2.03
SMNDC1-201ENST00000369592 TMOD3Q9NYL9 352 aa27.72■■■□□ 2.03
SMNDC1-201ENST00000369592 COL24A1Q17RW2 1714 aa27.71■■■□□ 2.03
SMNDC1-201ENST00000369592 ADAMTS7Q9UKP4 1686 aa27.71■■■□□ 2.03
SMNDC1-201ENST00000369592 ZNF784Q8NCA9 323 aaPredicted RBP27.7■■■□□ 2.02
SMNDC1-201ENST00000369592 ASAP1Q9ULH1 1129 aa27.7■■■□□ 2.02
SMNDC1-201ENST00000369592 PNPLA7Q6ZV29 1317 aa27.69■■■□□ 2.02
SMNDC1-201ENST00000369592 PTGER2P43116 358 aa27.69■■■□□ 2.02
SMNDC1-201ENST00000369592 SGIP1Q9BQI5 828 aa27.69■■■□□ 2.02
SMNDC1-201ENST00000369592 ATG3Q9NT62 314 aa27.69■■■□□ 2.02
SMNDC1-201ENST00000369592 ZNF831Q5JPB2 1677 aa27.68■■■□□ 2.02
SMNDC1-201ENST00000369592 VIRMAQ69YN4 1812 aaKnown RBP27.68■■■□□ 2.02
SMNDC1-201ENST00000369592 ZBTB7AO95365 584 aa27.67■■■□□ 2.02
SMNDC1-201ENST00000369592 AKAP4Q5JQC9 854 aa27.67■■■□□ 2.02
SMNDC1-201ENST00000369592 C1orf141Q5JVX7 400 aa27.66■■■□□ 2.02
SMNDC1-201ENST00000369592 MTFR1LQ9H019 292 aa27.66■■■□□ 2.02
SMNDC1-201ENST00000369592 C4BP0C0L5 1744 aa27.65■■■□□ 2.02
SMNDC1-201ENST00000369592 SENP3-EIF4A1A0A087X0R7 540 aa27.65■■■□□ 2.02
SMNDC1-201ENST00000369592 LOC102724428A0A0B4J2F2 783 aa27.65■■■□□ 2.02
SMNDC1-201ENST00000369592 SIK1P57059 783 aa27.65■■■□□ 2.02
SMNDC1-201ENST00000369592 MTHFSDQ2M296 383 aaKnown RBP27.65■■■□□ 2.02
SMNDC1-201ENST00000369592 HMGB2P26583 209 aaKnown RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms