RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 MAP3K5Q99683 1374 aa14.38□□□□□ -0.11
VANGL1-203ENST00000369509 CT47B1P0C2W7 299 aaPredicted RBP14.37□□□□□ -0.11
VANGL1-203ENST00000369509 GNAI1P63096 354 aa14.37□□□□□ -0.11
VANGL1-203ENST00000369509 EXOSC9Q06265 439 aaKnown RBP14.37□□□□□ -0.11
VANGL1-203ENST00000369509 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
VANGL1-203ENST00000369509 PARP4Q9UKK3 1724 aaKnown RBP14.37□□□□□ -0.11
VANGL1-203ENST00000369509 PLIN1O60240 522 aa14.37□□□□□ -0.11
VANGL1-203ENST00000369509 MCM10Q7L590 875 aa14.37□□□□□ -0.11
VANGL1-203ENST00000369509 SIPA1L3O60292 1781 aaPredicted RBP14.36□□□□□ -0.11
VANGL1-203ENST00000369509 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
VANGL1-203ENST00000369509 BCAR3O75815 825 aa14.36□□□□□ -0.11
VANGL1-203ENST00000369509 RARSP54136 660 aaKnown RBP14.36□□□□□ -0.11
VANGL1-203ENST00000369509 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
VANGL1-203ENST00000369509 MEGF6O75095 1541 aa14.36□□□□□ -0.11
VANGL1-203ENST00000369509 PLEKHG2Q9H7P9 1386 aa14.36□□□□□ -0.11
VANGL1-203ENST00000369509 MBIPQ9NS73 344 aa14.35□□□□□ -0.11
VANGL1-203ENST00000369509 KDM3BQ7LBC6 1761 aa14.35□□□□□ -0.11
VANGL1-203ENST00000369509 PLCH1Q4KWH8 1693 aa14.35□□□□□ -0.11
VANGL1-203ENST00000369509 SCN11AQ9UI33 1791 aa14.34□□□□□ -0.11
VANGL1-203ENST00000369509 GNAT3A8MTJ3 354 aa14.34□□□□□ -0.11
VANGL1-203ENST00000369509 TOM1O60784 492 aa14.34□□□□□ -0.11
VANGL1-203ENST00000369509 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
VANGL1-203ENST00000369509 ANP32EQ9BTT0 268 aa14.34□□□□□ -0.11
VANGL1-203ENST00000369509 LAS1LQ9Y4W2 734 aaKnown RBP14.34□□□□□ -0.11
VANGL1-203ENST00000369509 SHANK3Q9BYB0 1731 aa14.33□□□□□ -0.11
VANGL1-203ENST00000369509 WDR17Q8IZU2 1322 aa14.33□□□□□ -0.12
VANGL1-203ENST00000369509 CHL1O00533 1208 aa14.33□□□□□ -0.12
VANGL1-203ENST00000369509 HAP1P54257 671 aaPredicted RBP14.32□□□□□ -0.12
VANGL1-203ENST00000369509 C20orf194Q5TEA3 1177 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 B4GALNT3Q6L9W6 998 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
VANGL1-203ENST00000369509 NLRP2Q9NX02 1062 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.32□□□□□ -0.12
VANGL1-203ENST00000369509 IL17REQ8NFR9 667 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 WNK3Q9BYP7 1800 aa14.32□□□□□ -0.12
VANGL1-203ENST00000369509 PLEKHO1Q53GL0 409 aaPredicted RBP14.31□□□□□ -0.12
VANGL1-203ENST00000369509 CSB-PGBD3P0DP91 1061 aa14.3□□□□□ -0.12
VANGL1-203ENST00000369509 EXOC6Q8TAG9 804 aa14.3□□□□□ -0.12
VANGL1-203ENST00000369509 AKAP4Q5JQC9 854 aa14.3□□□□□ -0.12
VANGL1-203ENST00000369509 PIP4K2BP78356 416 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
VANGL1-203ENST00000369509 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 SSH1Q8WYL5 1049 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 ZNF428Q96B54 188 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 BCL2L13Q9BXK5 485 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 UBAP1LF5GYI3 381 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 VAMP4O75379 141 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 C8orf58Q8NAV2 365 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 CRBNQ96SW2 442 aa14.29□□□□□ -0.12
VANGL1-203ENST00000369509 ALDH1L2Q3SY69 923 aa14.28□□□□□ -0.12
VANGL1-203ENST00000369509 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
VANGL1-203ENST00000369509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.28□□□□□ -0.12
VANGL1-203ENST00000369509 NWD2Q9ULI1 1742 aa14.28□□□□□ -0.12
VANGL1-203ENST00000369509 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
VANGL1-203ENST00000369509 TWISTNBQ3B726 338 aaPredicted RBP14.27□□□□□ -0.13
VANGL1-203ENST00000369509 CACNA1FO60840 1977 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 BRPF1P55201 1214 aaPredicted RBP14.26□□□□□ -0.13
VANGL1-203ENST00000369509 PDE3AQ14432 1141 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 CARD10Q9BWT7 1032 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 LGR6Q9HBX8 967 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
VANGL1-203ENST00000369509 MRC1P22897 1456 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 KRT24Q2M2I5 525 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 TOM1L2Q6ZVM7 507 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 MIS18AQ9NYP9 233 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 TSPYL4Q9UJ04 414 aa14.26□□□□□ -0.13
VANGL1-203ENST00000369509 C1orf141Q5JVX7 400 aa14.25□□□□□ -0.13
VANGL1-203ENST00000369509 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
VANGL1-203ENST00000369509 CERKQ8TCT0 537 aa14.25□□□□□ -0.13
VANGL1-203ENST00000369509 RNMTO43148 476 aaKnown RBP14.24□□□□□ -0.13
VANGL1-203ENST00000369509 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
VANGL1-203ENST00000369509 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
VANGL1-203ENST00000369509 BTG4Q9NY30 223 aa14.24□□□□□ -0.13
VANGL1-203ENST00000369509 TNNQ9UQP3 1299 aa14.24□□□□□ -0.13
VANGL1-203ENST00000369509 MPRIPQ6WCQ1 1025 aa14.24□□□□□ -0.13
VANGL1-203ENST00000369509 KIF16BQ96L93 1317 aa14.23□□□□□ -0.13
VANGL1-203ENST00000369509 ELL2O00472 640 aaPredicted RBP14.23□□□□□ -0.13
VANGL1-203ENST00000369509 PHKG2P15735 406 aa14.23□□□□□ -0.13
VANGL1-203ENST00000369509 STRN4Q9NRL3 753 aa14.23□□□□□ -0.13
VANGL1-203ENST00000369509 SPG7Q9UQ90 795 aa14.23□□□□□ -0.13
VANGL1-203ENST00000369509 DISP2A7MBM2 1401 aa14.23□□□□□ -0.13
VANGL1-203ENST00000369509 RLBP1P12271 317 aa14.22□□□□□ -0.13
VANGL1-203ENST00000369509 CANXP27824 592 aaKnown RBP14.22□□□□□ -0.13
VANGL1-203ENST00000369509 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
VANGL1-203ENST00000369509 TOGARAM1Q9Y4F4 1720 aa14.22□□□□□ -0.13
VANGL1-203ENST00000369509 CYP27B1O15528 508 aa14.22□□□□□ -0.13
VANGL1-203ENST00000369509 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
VANGL1-203ENST00000369509 PANK1Q8TE04 598 aa14.22□□□□□ -0.13
VANGL1-203ENST00000369509 TRIM27P14373 513 aa14.21□□□□□ -0.13
VANGL1-203ENST00000369509 SLIT2O94813 1529 aa14.21□□□□□ -0.13
VANGL1-203ENST00000369509 EVA1CP58658 441 aa14.21□□□□□ -0.14
VANGL1-203ENST00000369509 IFNL2Q8IZJ0 200 aa14.21□□□□□ -0.14
VANGL1-203ENST00000369509 NOB1Q9ULX3 412 aaKnown RBP14.21□□□□□ -0.14
VANGL1-203ENST00000369509 JCADQ9P266 1359 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms