RNA–Protein interactions for RNA: ENST00000369484.7

CMC4-202, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC4, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-202ENST00000369484 SLC27A3Q5K4L6 730 aa37.31■■■■□ 3.56
CMC4-202ENST00000369484 TMF1P82094 1093 aa37.29■■■■□ 3.56
CMC4-202ENST00000369484 AKT1S1Q96B36 256 aa37.29■■■■□ 3.56
CMC4-202ENST00000369484 FYB1O15117 783 aa37.28■■■■□ 3.56
CMC4-202ENST00000369484 NSD2O96028 1365 aa37.28■■■■□ 3.56
CMC4-202ENST00000369484 ZCRB1Q8TBF4 217 aaKnown RBP37.27■■■■□ 3.56
CMC4-202ENST00000369484 MAP3K5Q99683 1374 aa37.27■■■■□ 3.56
CMC4-202ENST00000369484 RRS1Q15050 365 aaKnown RBP37.26■■■■□ 3.56
CMC4-202ENST00000369484 ARXQ96QS3 562 aa37.26■■■■□ 3.56
CMC4-202ENST00000369484 PRIM1P49642 420 aaKnown RBP37.25■■■■□ 3.55
CMC4-202ENST00000369484 GGNBP2Q9H3C7 697 aa37.25■■■■□ 3.55
CMC4-202ENST00000369484 SYTL4Q96C24 671 aaPredicted RBP37.24■■■■□ 3.55
CMC4-202ENST00000369484 GOLGB1Q14789 3259 aaKnown RBP37.23■■■■□ 3.55
CMC4-202ENST00000369484 NBPF6Q5VWK0 638 aa37.23■■■■□ 3.55
CMC4-202ENST00000369484 NBPF4Q96M43 638 aa37.23■■■■□ 3.55
CMC4-202ENST00000369484 SMG6Q86US8 1419 aaKnown RBP37.21■■■■□ 3.55
CMC4-202ENST00000369484 SLC16A10Q8TF71 515 aa37.21■■■■□ 3.55
CMC4-202ENST00000369484 CGNL1Q0VF96 1302 aa37.2■■■■□ 3.55
CMC4-202ENST00000369484 PNPLA7Q6ZV29 1317 aa37.19■■■■□ 3.54
CMC4-202ENST00000369484 KCNQ4P56696 695 aa37.16■■■■□ 3.54
CMC4-202ENST00000369484 TRIM26Q12899 539 aaPredicted RBP37.16■■■■□ 3.54
CMC4-202ENST00000369484 CDCA8Q53HL2 280 aa37.16■■■■□ 3.54
CMC4-202ENST00000369484 USHBP1Q8N6Y0 703 aa37.16■■■■□ 3.54
CMC4-202ENST00000369484 INSRP06213 1382 aa37.16■■■■□ 3.54
CMC4-202ENST00000369484 KIF24Q5T7B8 1368 aa37.16■■■■□ 3.54
CMC4-202ENST00000369484 FLT4P35916 1363 aa37.15■■■■□ 3.54
CMC4-202ENST00000369484 RAPGEF4Q8WZA2 1011 aa37.13■■■■□ 3.53
CMC4-202ENST00000369484 TFCP2L1Q9NZI6 479 aa37.13■■■■□ 3.53
CMC4-202ENST00000369484 HSP90AB2PQ58FF8 381 aa37.12■■■■□ 3.53
CMC4-202ENST00000369484 ANKRD26Q9UPS8 1709 aa37.12■■■■□ 3.53
CMC4-202ENST00000369484 TAF1LQ8IZX4 1826 aa37.11■■■■□ 3.53
CMC4-202ENST00000369484 C5P01031 1676 aa37.11■■■■□ 3.53
CMC4-202ENST00000369484 CCNL1Q9UK58 526 aaPredicted RBP37.1■■■■□ 3.53
CMC4-202ENST00000369484 ITGB4P16144 1822 aa37.1■■■■□ 3.53
CMC4-202ENST00000369484 PKD1L3Q7Z443 1732 aa37.09■■■■□ 3.53
CMC4-202ENST00000369484 TATP17735 454 aaPredicted RBP37.08■■■■□ 3.53
CMC4-202ENST00000369484 POLD1P28340 1107 aa37.08■■■■□ 3.53
CMC4-202ENST00000369484 TOGARAM1Q9Y4F4 1720 aa37.07■■■■□ 3.53
CMC4-202ENST00000369484 MAP2P11137 1827 aaKnown RBP37.07■■■■□ 3.52
CMC4-202ENST00000369484 ZNF784Q8NCA9 323 aaPredicted RBP37.06■■■■□ 3.52
CMC4-202ENST00000369484 CARD14Q9BXL6 1004 aa37.06■■■■□ 3.52
CMC4-202ENST00000369484 PCDH11XQ9BZA7 1347 aa37.06■■■■□ 3.52
CMC4-202ENST00000369484 PCDH11YQ9BZA8 1340 aa37.06■■■■□ 3.52
CMC4-202ENST00000369484 NSD3Q9BZ95 1437 aa37.05■■■■□ 3.52
CMC4-202ENST00000369484 NCAPD2Q15021 1401 aa37.02■■■■□ 3.52
CMC4-202ENST00000369484 EMILIN1Q9Y6C2 1016 aa37■■■■□ 3.51
CMC4-202ENST00000369484 KLHL34Q8N239 644 aa36.99■■■■□ 3.51
CMC4-202ENST00000369484 CYP27B1O15528 508 aa36.97■■■■□ 3.51
CMC4-202ENST00000369484 COL23A1Q86Y22 540 aaPredicted RBP36.96■■■■□ 3.51
CMC4-202ENST00000369484 TIMELESSQ9UNS1 1208 aa36.96■■■■□ 3.51
CMC4-202ENST00000369484 GPR162Q16538 588 aa36.95■■■■□ 3.51
CMC4-202ENST00000369484 PALLDQ8WX93 1383 aa36.94■■■■□ 3.5
CMC4-202ENST00000369484 C4BP0C0L5 1744 aa36.92■■■■□ 3.5
CMC4-202ENST00000369484 UBR3Q6ZT12 1888 aa36.91■■■■□ 3.5
CMC4-202ENST00000369484 MPRIPQ6WCQ1 1025 aa36.91■■■■□ 3.5
CMC4-202ENST00000369484 NLGN2Q8NFZ4 835 aa36.91■■■■□ 3.5
CMC4-202ENST00000369484 MSH5O43196 834 aa36.9■■■■□ 3.5
CMC4-202ENST00000369484 HMGB2P26583 209 aaKnown RBP36.9■■■■□ 3.5
CMC4-202ENST00000369484 WASHC2AQ641Q2 1341 aa36.88■■■■□ 3.49
CMC4-202ENST00000369484 PPM1GO15355 546 aaPredicted RBP36.86■■■■□ 3.49
CMC4-202ENST00000369484 NKX1-1Q15270 411 aaPredicted RBP36.85■■■■□ 3.49
CMC4-202ENST00000369484 FLAD1Q8NFF5 587 aa36.84■■■■□ 3.49
CMC4-202ENST00000369484 SMARCC1Q92922 1105 aaPredicted RBP36.84■■■■□ 3.49
CMC4-202ENST00000369484 CLSPNQ9HAW4 1339 aa36.84■■■■□ 3.49
CMC4-202ENST00000369484 MSL1Q68DK7 614 aa36.83■■■■□ 3.49
CMC4-202ENST00000369484 PELP1Q8IZL8 1130 aaKnown RBP36.83■■■■□ 3.49
CMC4-202ENST00000369484 SPG7Q9UQ90 795 aa36.82■■■■□ 3.48
CMC4-202ENST00000369484 EYA1Q99502 592 aa36.81■■■■□ 3.48
CMC4-202ENST00000369484 PIGBQ92521 554 aa36.8■■■■□ 3.48
CMC4-202ENST00000369484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.8■■■■□ 3.48
CMC4-202ENST00000369484 POLKQ9UBT6 870 aa36.8■■■■□ 3.48
CMC4-202ENST00000369484 YBX3P16989 372 aaKnown RBP eCLIP36.75■■■■□ 3.471e-6■■■■□ 21.3
CMC4-202ENST00000369484 AK7Q96M32 723 aa36.75■■■■□ 3.47
CMC4-202ENST00000369484 AMIGO3Q86WK7 504 aa36.74■■■■□ 3.47
CMC4-202ENST00000369484 PLEKHG2Q9H7P9 1386 aa36.73■■■■□ 3.47
CMC4-202ENST00000369484 GRIN3BO60391 1043 aa36.72■■■■□ 3.47
CMC4-202ENST00000369484 CD2APQ9Y5K6 639 aa36.72■■■■□ 3.47
CMC4-202ENST00000369484 LOC102724428A0A0B4J2F2 783 aa36.7■■■■□ 3.47
CMC4-202ENST00000369484 PHKG2P15735 406 aa36.7■■■■□ 3.47
CMC4-202ENST00000369484 SIK1P57059 783 aa36.7■■■■□ 3.47
CMC4-202ENST00000369484 C1QTNF8P60827 252 aa36.7■■■■□ 3.47
CMC4-202ENST00000369484 EIF4A2Q14240 407 aaKnown RBP36.7■■■■□ 3.47
CMC4-202ENST00000369484 IFNL2Q8IZJ0 200 aa36.7■■■■□ 3.47
CMC4-202ENST00000369484 POLR3GLQ9BT43 218 aa36.7■■■■□ 3.47
CMC4-202ENST00000369484 TMOD3Q9NYL9 352 aa36.7■■■■□ 3.47
CMC4-202ENST00000369484 LINC00116Q8NCU8 138 aa36.67■■■■□ 3.46
CMC4-202ENST00000369484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.66■■■■□ 3.46
CMC4-202ENST00000369484 SSFA2P28290 1259 aa36.66■■■■□ 3.46
CMC4-202ENST00000369484 PCGF6Q9BYE7 350 aa36.66■■■■□ 3.46
CMC4-202ENST00000369484 PHF14O94880 888 aa36.65■■■■□ 3.46
CMC4-202ENST00000369484 TNNT2P45379 298 aaPredicted RBP36.65■■■■□ 3.46
CMC4-202ENST00000369484 ASAP1Q9ULH1 1129 aa36.65■■■■□ 3.46
CMC4-202ENST00000369484 ZNF831Q5JPB2 1677 aa36.64■■■■□ 3.46
CMC4-202ENST00000369484 SMIM5Q71RC9 77 aa36.64■■■■□ 3.46
CMC4-202ENST00000369484 IGSF1Q8N6C5 1336 aa36.63■■■■□ 3.45
CMC4-202ENST00000369484 ITPK1Q13572 414 aa36.62■■■■□ 3.45
CMC4-202ENST00000369484 GIGYF1O75420 1035 aaPredicted RBP36.6■■■■□ 3.45
CMC4-202ENST00000369484 EIF4G2P78344 907 aaKnown RBP eCLIP36.6■■■■□ 3.45
CMC4-202ENST00000369484 COL5A3P25940 1745 aaPredicted RBP36.59■■■■□ 3.45
CMC4-202ENST00000369484 SENP3-EIF4A1A0A087X0R7 540 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms