RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 LAMB4A4D0S4 1761 aa6.43□□□□□ -1.38
CTSS-201ENST00000368985 CC2D1BQ5T0F9 858 aaKnown RBP6.43□□□□□ -1.38
CTSS-201ENST00000368985 FAM9BQ8IZU0 186 aa6.43□□□□□ -1.38
CTSS-201ENST00000368985 SCN7AQ01118 1682 aa6.43□□□□□ -1.38
CTSS-201ENST00000368985 NKX1-1Q15270 411 aaPredicted RBP6.43□□□□□ -1.38
CTSS-201ENST00000368985 NBPF14Q5TI25 921 aa6.43□□□□□ -1.38
CTSS-201ENST00000368985 CABP1Q9NZU7 370 aa6.43□□□□□ -1.38
CTSS-201ENST00000368985 USP47Q96K76 1375 aa6.43□□□□□ -1.38
CTSS-201ENST00000368985 HAP1P54257 671 aaPredicted RBP6.42□□□□□ -1.38
CTSS-201ENST00000368985 C10orf71Q711Q0 1435 aa6.42□□□□□ -1.38
CTSS-201ENST00000368985 SOX12O15370 315 aa6.42□□□□□ -1.38
CTSS-201ENST00000368985 SRPK2P78362 688 aaKnown RBP6.42□□□□□ -1.38
CTSS-201ENST00000368985 FAM98CQ17RN3 349 aaKnown RBP6.41□□□□□ -1.38
CTSS-201ENST00000368985 TULP1O00294 542 aaPredicted RBP6.4□□□□□ -1.38
CTSS-201ENST00000368985 XPCQ01831 940 aaPredicted RBP6.4□□□□□ -1.38
CTSS-201ENST00000368985 LARP1Q6PKG0 1096 aaKnown RBP6.4□□□□□ -1.38
CTSS-201ENST00000368985 SGIP1Q9BQI5 828 aa6.4□□□□□ -1.38
CTSS-201ENST00000368985 CABP2Q9NPB3 220 aa6.4□□□□□ -1.38
CTSS-201ENST00000368985 MEGF6O75095 1541 aa6.4□□□□□ -1.38
CTSS-201ENST00000368985 RGL2O15211 777 aa6.4□□□□□ -1.38
CTSS-201ENST00000368985 TMF1P82094 1093 aa6.4□□□□□ -1.38
CTSS-201ENST00000368985 KDRP35968 1356 aa6.4□□□□□ -1.38
CTSS-201ENST00000368985 TNRC6CQ9HCJ0 1690 aaKnown RBP6.4□□□□□ -1.38
CTSS-201ENST00000368985 DDB1Q16531 1140 aa6.4□□□□□ -1.39
CTSS-201ENST00000368985 CABLES1Q8TDN4 633 aa6.4□□□□□ -1.39
CTSS-201ENST00000368985 WASHC2AQ641Q2 1341 aa6.4□□□□□ -1.39
CTSS-201ENST00000368985 IL2RBP14784 551 aa6.4□□□□□ -1.39
CTSS-201ENST00000368985 PDE3BQ13370 1112 aa6.4□□□□□ -1.39
CTSS-201ENST00000368985 FKBP8Q14318 412 aa6.4□□□□□ -1.39
CTSS-201ENST00000368985 NLRP6P59044 892 aa6.39□□□□□ -1.39
CTSS-201ENST00000368985 COL3A1P02461 1466 aaPredicted RBP6.39□□□□□ -1.39
CTSS-201ENST00000368985 ZBTB7CA1YPR0 619 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 KCNQ2O43526 872 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 EVA1CP58658 441 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 FLAD1Q8NFF5 587 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 AKT1S1Q96B36 256 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 PPM1GO15355 546 aaPredicted RBP6.38□□□□□ -1.39
CTSS-201ENST00000368985 MARCH10Q8NA82 808 aaPredicted RBP6.38□□□□□ -1.39
CTSS-201ENST00000368985 MRS2Q9HD23 443 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 KIF7Q2M1P5 1343 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 PCDH11XQ9BZA7 1347 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 PCDH11YQ9BZA8 1340 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 LMOD2Q6P5Q4 547 aa6.38□□□□□ -1.39
CTSS-201ENST00000368985 HOXC9P31274 260 aa6.37□□□□□ -1.39
CTSS-201ENST00000368985 KDM3BQ7LBC6 1761 aa6.37□□□□□ -1.39
CTSS-201ENST00000368985 DICER1Q9UPY3 1922 aaKnown RBP6.37□□□□□ -1.39
CTSS-201ENST00000368985 EXOC5O00471 708 aa6.37□□□□□ -1.39
CTSS-201ENST00000368985 MTFR1LQ9H019 292 aa6.36□□□□□ -1.39
CTSS-201ENST00000368985 AXIN2Q9Y2T1 843 aa6.36□□□□□ -1.39
CTSS-201ENST00000368985 PAK3O75914 559 aaPredicted RBP6.36□□□□□ -1.39
CTSS-201ENST00000368985 COG3Q96JB2 828 aa6.36□□□□□ -1.39
CTSS-201ENST00000368985 PANK3Q9H999 370 aa6.36□□□□□ -1.39
CTSS-201ENST00000368985 CENPBP07199 599 aaPredicted RBP6.36□□□□□ -1.39
CTSS-201ENST00000368985 HNRNPUQ00839 825 aaKnown RBP eCLIP6.35□□□□□ -1.39
CTSS-201ENST00000368985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.35□□□□□ -1.39
CTSS-201ENST00000368985 ANKRD24Q8TF21 1146 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 SPON1Q9HCB6 807 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 FOXD4L1Q9NU39 408 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 ADCY9O60503 1353 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 EZH2Q15910 746 aaKnown RBP6.35□□□□□ -1.39
CTSS-201ENST00000368985 KNSTRNQ9Y448 316 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 IGSF1Q8N6C5 1336 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 SLC15A2Q16348 729 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 SMARCC1Q92922 1105 aaPredicted RBP6.35□□□□□ -1.39
CTSS-201ENST00000368985 APBA3O96018 575 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 PTGER2P43116 358 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 TOM1L2Q6ZVM7 507 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 SLC12A5Q9H2X9 1139 aa6.35□□□□□ -1.39
CTSS-201ENST00000368985 STK32BQ9NY57 414 aa6.34□□□□□ -1.39
CTSS-201ENST00000368985 EIF5BO60841 1220 aaKnown RBP6.34□□□□□ -1.39
CTSS-201ENST00000368985 ZC3H6P61129 1189 aaKnown RBP6.34□□□□□ -1.39
CTSS-201ENST00000368985 CCDC184Q52MB2 194 aa6.34□□□□□ -1.39
CTSS-201ENST00000368985 KCPQ6ZWJ8 1503 aa6.34□□□□□ -1.39
CTSS-201ENST00000368985 PXDNLA1KZ92 1463 aa6.34□□□□□ -1.39
CTSS-201ENST00000368985 FYB1O15117 783 aa6.34□□□□□ -1.4
CTSS-201ENST00000368985 EN1Q05925 392 aaPredicted RBP6.34□□□□□ -1.4
CTSS-201ENST00000368985 CHRNA2Q15822 529 aa6.33□□□□□ -1.4
CTSS-201ENST00000368985 RC3H1Q5TC82 1133 aaKnown RBP6.33□□□□□ -1.4
CTSS-201ENST00000368985 RIC1Q4ADV7 1423 aa6.33□□□□□ -1.4
CTSS-201ENST00000368985 NUTM2GQ5VZR2 741 aa6.33□□□□□ -1.4
CTSS-201ENST00000368985 DEFB132Q7Z7B7 95 aa6.33□□□□□ -1.4
CTSS-201ENST00000368985 PROM2Q8N271 834 aa6.33□□□□□ -1.4
CTSS-201ENST00000368985 CCDC9Q9Y3X0 531 aaKnown RBP6.33□□□□□ -1.4
CTSS-201ENST00000368985 LAMB2P55268 1798 aa6.33□□□□□ -1.4
CTSS-201ENST00000368985 HSP90AB1P08238 724 aaKnown RBP6.33□□□□□ -1.4
CTSS-201ENST00000368985 TXNRD1Q16881 649 aa6.33□□□□□ -1.4
CTSS-201ENST00000368985 AFDNP55196 1824 aaKnown RBP6.32□□□□□ -1.4
CTSS-201ENST00000368985 TRIM37O94972 964 aa6.32□□□□□ -1.4
CTSS-201ENST00000368985 CNTNAP4Q9C0A0 1308 aa6.32□□□□□ -1.4
CTSS-201ENST00000368985 NME9Q86XW9 330 aa6.32□□□□□ -1.4
CTSS-201ENST00000368985 DUOX1Q9NRD9 1551 aa6.32□□□□□ -1.4
CTSS-201ENST00000368985 ERVV-2B6SEH9 535 aa6.32□□□□□ -1.4
CTSS-201ENST00000368985 ANKRD36CQ5JPF3 1778 aa6.32□□□□□ -1.4
CTSS-201ENST00000368985 NEUROD2Q15784 382 aa6.31□□□□□ -1.4
CTSS-201ENST00000368985 FBLN1P23142 703 aa6.31□□□□□ -1.4
CTSS-201ENST00000368985 STRN4Q9NRL3 753 aa6.31□□□□□ -1.4
CTSS-201ENST00000368985 TAOK2Q9UL54 1235 aa6.31□□□□□ -1.4
CTSS-201ENST00000368985 SSFA2P28290 1259 aa6.31□□□□□ -1.4
CTSS-201ENST00000368985 ZCRB1Q8TBF4 217 aaKnown RBP6.31□□□□□ -1.4
CTSS-201ENST00000368985 CD2APQ9Y5K6 639 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms