RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 ACSBG1Q96GR2 724 aa12.09□□□□□ -0.47
SCNM1-201ENST00000368902 FAM208AQ9UK61 1670 aaKnown RBP12.08□□□□□ -0.48
SCNM1-201ENST00000368902 SENP3-EIF4A1A0A087X0R7 540 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 ARXQ96QS3 562 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
SCNM1-201ENST00000368902 IL2RBP14784 551 aa12.07□□□□□ -0.48
SCNM1-201ENST00000368902 RRS1Q15050 365 aaKnown RBP12.07□□□□□ -0.48
SCNM1-201ENST00000368902 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
SCNM1-201ENST00000368902 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
SCNM1-201ENST00000368902 HOXC9P31274 260 aa12.06□□□□□ -0.48
SCNM1-201ENST00000368902 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
SCNM1-201ENST00000368902 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
SCNM1-201ENST00000368902 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
SCNM1-201ENST00000368902 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
SCNM1-201ENST00000368902 KIF7Q2M1P5 1343 aa12.04□□□□□ -0.48
SCNM1-201ENST00000368902 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
SCNM1-201ENST00000368902 C1QTNF8P60827 252 aa12.03□□□□□ -0.48
SCNM1-201ENST00000368902 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
SCNM1-201ENST00000368902 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
SCNM1-201ENST00000368902 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
SCNM1-201ENST00000368902 POLD1P28340 1107 aa12.02□□□□□ -0.49
SCNM1-201ENST00000368902 GPR162Q16538 588 aa12.02□□□□□ -0.49
SCNM1-201ENST00000368902 HSP90AB2PQ58FF8 381 aa12.02□□□□□ -0.49
SCNM1-201ENST00000368902 PNPLA7Q6ZV29 1317 aa12.02□□□□□ -0.49
SCNM1-201ENST00000368902 SHANK3Q9BYB0 1731 aa12.02□□□□□ -0.49
SCNM1-201ENST00000368902 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
SCNM1-201ENST00000368902 TNNT2P45379 298 aaPredicted RBP12.01□□□□□ -0.49
SCNM1-201ENST00000368902 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
SCNM1-201ENST00000368902 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
SCNM1-201ENST00000368902 SLC16A10Q8TF71 515 aa12.01□□□□□ -0.49
SCNM1-201ENST00000368902 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
SCNM1-201ENST00000368902 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
SCNM1-201ENST00000368902 LY75O60449 1722 aa12□□□□□ -0.49
SCNM1-201ENST00000368902 POLKQ9UBT6 870 aa12□□□□□ -0.49
SCNM1-201ENST00000368902 MEGF6O75095 1541 aa12□□□□□ -0.49
SCNM1-201ENST00000368902 CEP350Q5VT06 3117 aa11.99□□□□□ -0.49
SCNM1-201ENST00000368902 NBPF6Q5VWK0 638 aa11.99□□□□□ -0.49
SCNM1-201ENST00000368902 MORC1Q86VD1 984 aa11.99□□□□□ -0.49
SCNM1-201ENST00000368902 SYTL4Q96C24 671 aaPredicted RBP11.99□□□□□ -0.49
SCNM1-201ENST00000368902 NBPF4Q96M43 638 aa11.99□□□□□ -0.49
SCNM1-201ENST00000368902 TFCP2L1Q9NZI6 479 aa11.99□□□□□ -0.49
SCNM1-201ENST00000368902 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
SCNM1-201ENST00000368902 NSD2O96028 1365 aa11.99□□□□□ -0.49
SCNM1-201ENST00000368902 INSRP06213 1382 aa11.98□□□□□ -0.49
SCNM1-201ENST00000368902 FLT4P35916 1363 aa11.98□□□□□ -0.49
SCNM1-201ENST00000368902 KIF24Q5T7B8 1368 aa11.98□□□□□ -0.49
SCNM1-201ENST00000368902 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
SCNM1-201ENST00000368902 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
SCNM1-201ENST00000368902 DDX54Q8TDD1 881 aaKnown RBP11.98□□□□□ -0.49
SCNM1-201ENST00000368902 WASHC2AQ641Q2 1341 aa11.97□□□□□ -0.49
SCNM1-201ENST00000368902 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
SCNM1-201ENST00000368902 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
SCNM1-201ENST00000368902 KCNQ4P56696 695 aa11.96□□□□□ -0.49
SCNM1-201ENST00000368902 USHBP1Q8N6Y0 703 aa11.96□□□□□ -0.49
SCNM1-201ENST00000368902 C5P01031 1676 aa11.96□□□□□ -0.5
SCNM1-201ENST00000368902 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
SCNM1-201ENST00000368902 ZCRB1Q8TBF4 217 aaKnown RBP11.95□□□□□ -0.5
SCNM1-201ENST00000368902 RAPGEF4Q8WZA2 1011 aa11.95□□□□□ -0.5
SCNM1-201ENST00000368902 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
SCNM1-201ENST00000368902 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
SCNM1-201ENST00000368902 TATP17735 454 aaPredicted RBP11.94□□□□□ -0.5
SCNM1-201ENST00000368902 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
SCNM1-201ENST00000368902 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
SCNM1-201ENST00000368902 YBX3P16989 372 aaKnown RBP eCLIP11.93□□□□□ -0.51e-8■■■□□ 16.6
SCNM1-201ENST00000368902 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
SCNM1-201ENST00000368902 EYA1Q99502 592 aa11.93□□□□□ -0.5
SCNM1-201ENST00000368902 GRIN3BO60391 1043 aa11.92□□□□□ -0.5
SCNM1-201ENST00000368902 CNGB1Q14028 1251 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-201ENST00000368902 EIF4A2Q14240 407 aaKnown RBP11.92□□□□□ -0.5
SCNM1-201ENST00000368902 MSL1Q68DK7 614 aa11.92□□□□□ -0.5
SCNM1-201ENST00000368902 MTHFSP49914 203 aa11.9□□□□□ -0.5
SCNM1-201ENST00000368902 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
SCNM1-201ENST00000368902 TOGARAM1Q9Y4F4 1720 aa11.9□□□□□ -0.5
SCNM1-201ENST00000368902 ADCY9O60503 1353 aa11.9□□□□□ -0.5
SCNM1-201ENST00000368902 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
SCNM1-201ENST00000368902 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
SCNM1-201ENST00000368902 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
SCNM1-201ENST00000368902 C4BP0C0L5 1744 aa11.89□□□□□ -0.51
SCNM1-201ENST00000368902 KIF20BQ96Q89 1820 aa11.89□□□□□ -0.51
SCNM1-201ENST00000368902 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-201ENST00000368902 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
SCNM1-201ENST00000368902 FLAD1Q8NFF5 587 aa11.88□□□□□ -0.51
SCNM1-201ENST00000368902 SPG7Q9UQ90 795 aa11.88□□□□□ -0.51
SCNM1-201ENST00000368902 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
SCNM1-201ENST00000368902 PKD1L3Q7Z443 1732 aa11.87□□□□□ -0.51
SCNM1-201ENST00000368902 IL13P35225 146 aa11.87□□□□□ -0.51
SCNM1-201ENST00000368902 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
SCNM1-201ENST00000368902 ZEB1P37275 1124 aaPredicted RBP11.86□□□□□ -0.51
SCNM1-201ENST00000368902 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
SCNM1-201ENST00000368902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCNM1-201ENST00000368902 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
SCNM1-201ENST00000368902 ITGB4P16144 1822 aa11.86□□□□□ -0.51
SCNM1-201ENST00000368902 CYP27B1O15528 508 aa11.85□□□□□ -0.51
SCNM1-201ENST00000368902 SMARCC1Q92922 1105 aaPredicted RBP11.85□□□□□ -0.51
SCNM1-201ENST00000368902 AK7Q96M32 723 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms