RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 GNAT3A8MTJ3 354 aa25.17■■□□□ 1.62
CHTOP-204ENST00000368694 PLIN1O60240 522 aa25.17■■□□□ 1.62
CHTOP-204ENST00000368694 CFAP44Q96MT7 982 aa25.17■■□□□ 1.62
CHTOP-204ENST00000368694 MAP3K5Q99683 1374 aa25.17■■□□□ 1.62
CHTOP-204ENST00000368694 COL5A2P05997 1499 aaPredicted RBP25.14■■□□□ 1.62
CHTOP-204ENST00000368694 ZNF853P0CG23 659 aa25.14■■□□□ 1.62
CHTOP-204ENST00000368694 PLEKHO1Q53GL0 409 aaPredicted RBP25.14■■□□□ 1.62
CHTOP-204ENST00000368694 MBIPQ9NS73 344 aa25.14■■□□□ 1.62
CHTOP-204ENST00000368694 HTATSF1O43719 755 aaKnown RBP25.14■■□□□ 1.61
CHTOP-204ENST00000368694 BCAR3O75815 825 aa25.14■■□□□ 1.61
CHTOP-204ENST00000368694 ERICH6BQ5W0A0 696 aa25.14■■□□□ 1.61
CHTOP-204ENST00000368694 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.14■■□□□ 1.61
CHTOP-204ENST00000368694 RAPGEF4Q8WZA2 1011 aa25.14■■□□□ 1.61
CHTOP-204ENST00000368694 AMOTQ4VCS5 1084 aa25.13■■□□□ 1.61
CHTOP-204ENST00000368694 CT47B1P0C2W7 299 aaPredicted RBP25.13■■□□□ 1.61
CHTOP-204ENST00000368694 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
CHTOP-204ENST00000368694 ZNF530Q6P9A1 599 aaPredicted RBP25.12■■□□□ 1.61
CHTOP-204ENST00000368694 LRRC37A3O60309 1634 aa25.12■■□□□ 1.61
CHTOP-204ENST00000368694 RARSP54136 660 aaKnown RBP25.11■■□□□ 1.61
CHTOP-204ENST00000368694 CRB1P82279 1406 aa25.11■■□□□ 1.61
CHTOP-204ENST00000368694 TOM1L2Q6ZVM7 507 aa25.11■■□□□ 1.61
CHTOP-204ENST00000368694 COL14A1Q05707 1796 aaKnown RBP25.1■■□□□ 1.61
CHTOP-204ENST00000368694 CERKQ8TCT0 537 aa25.1■■□□□ 1.61
CHTOP-204ENST00000368694 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
CHTOP-204ENST00000368694 EVA1CP58658 441 aa25.09■■□□□ 1.61
CHTOP-204ENST00000368694 TATP17735 454 aaPredicted RBP25.09■■□□□ 1.61
CHTOP-204ENST00000368694 C1orf141Q5JVX7 400 aa25.09■■□□□ 1.61
CHTOP-204ENST00000368694 VIRMAQ69YN4 1812 aaKnown RBP25.09■■□□□ 1.61
CHTOP-204ENST00000368694 BCL2L13Q9BXK5 485 aa25.08■■□□□ 1.61
CHTOP-204ENST00000368694 MEGF6O75095 1541 aa25.08■■□□□ 1.61
CHTOP-204ENST00000368694 AKAP4Q5JQC9 854 aa25.08■■□□□ 1.6
CHTOP-204ENST00000368694 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
CHTOP-204ENST00000368694 CHL1O00533 1208 aa25.06■■□□□ 1.6
CHTOP-204ENST00000368694 IL17REQ8NFR9 667 aa25.06■■□□□ 1.6
CHTOP-204ENST00000368694 BTG4Q9NY30 223 aa25.06■■□□□ 1.6
CHTOP-204ENST00000368694 TSPYL4Q9UJ04 414 aa25.05■■□□□ 1.6
CHTOP-204ENST00000368694 PARP4Q9UKK3 1724 aaKnown RBP25.04■■□□□ 1.6
CHTOP-204ENST00000368694 FRAT1Q92837 279 aaPredicted RBP25.04■■□□□ 1.6
CHTOP-204ENST00000368694 C20orf194Q5TEA3 1177 aa25.03■■□□□ 1.6
CHTOP-204ENST00000368694 LARP1Q6PKG0 1096 aaKnown RBP25.03■■□□□ 1.6
CHTOP-204ENST00000368694 SMC4Q9NTJ3 1288 aa25.03■■□□□ 1.6
CHTOP-204ENST00000368694 PPP4R2Q9NY27 417 aa25.03■■□□□ 1.6
CHTOP-204ENST00000368694 MIS18AQ9NYP9 233 aa25.03■■□□□ 1.6
CHTOP-204ENST00000368694 ELL2O00472 640 aaPredicted RBP25.03■■□□□ 1.6
CHTOP-204ENST00000368694 SPG7Q9UQ90 795 aa25.03■■□□□ 1.6
CHTOP-204ENST00000368694 PKD1L3Q7Z443 1732 aa25.02■■□□□ 1.6
CHTOP-204ENST00000368694 ADAMTS2O95450 1211 aa25.02■■□□□ 1.6
CHTOP-204ENST00000368694 TSPYL6Q8N831 410 aa25.02■■□□□ 1.6
CHTOP-204ENST00000368694 CEMIPQ8WUJ3 1361 aa25.02■■□□□ 1.6
CHTOP-204ENST00000368694 NUTM2BA6NNL0 878 aaPredicted RBP25.01■■□□□ 1.59
CHTOP-204ENST00000368694 NUTM2EB1AL46 878 aaPredicted RBP25.01■■□□□ 1.59
CHTOP-204ENST00000368694 TWISTNBQ3B726 338 aaPredicted RBP25.01■■□□□ 1.59
CHTOP-204ENST00000368694 MPRIPQ6WCQ1 1025 aa25.01■■□□□ 1.59
CHTOP-204ENST00000368694 NUTM2AQ8IVF1 878 aaPredicted RBP25.01■■□□□ 1.59
CHTOP-204ENST00000368694 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
CHTOP-204ENST00000368694 PLCH1Q4KWH8 1693 aa25.01■■□□□ 1.59
CHTOP-204ENST00000368694 C8orf58Q8NAV2 365 aa25.01■■□□□ 1.59
CHTOP-204ENST00000368694 EXOC6Q8TAG9 804 aa25.01■■□□□ 1.59
CHTOP-204ENST00000368694 LGR6Q9HBX8 967 aa25.01■■□□□ 1.59
CHTOP-204ENST00000368694 PLEKHG2Q9H7P9 1386 aa25.01■■□□□ 1.59
CHTOP-204ENST00000368694 SSH1Q8WYL5 1049 aa25■■□□□ 1.59
CHTOP-204ENST00000368694 ZNF428Q96B54 188 aa25■■□□□ 1.59
CHTOP-204ENST00000368694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25■■□□□ 1.59
CHTOP-204ENST00000368694 VAMP4O75379 141 aa24.99■■□□□ 1.59
CHTOP-204ENST00000368694 TAF7Q15545 349 aaPredicted RBP24.99■■□□□ 1.59
CHTOP-204ENST00000368694 OVOS2A0A0G2JMS6 1433 aa24.99■■□□□ 1.59
CHTOP-204ENST00000368694 CRBNQ96SW2 442 aa24.98■■□□□ 1.59
CHTOP-204ENST00000368694 TEFQ10587 303 aa24.98■■□□□ 1.59
CHTOP-204ENST00000368694 USP35Q9P2H5 1018 aa24.98■■□□□ 1.59
CHTOP-204ENST00000368694 ALDH1L2Q3SY69 923 aa24.97■■□□□ 1.59
CHTOP-204ENST00000368694 RNMTO43148 476 aaKnown RBP24.97■■□□□ 1.59
CHTOP-204ENST00000368694 KRT24Q2M2I5 525 aa24.97■■□□□ 1.59
CHTOP-204ENST00000368694 IL2RBP14784 551 aa24.95■■□□□ 1.59
CHTOP-204ENST00000368694 IFNL2Q8IZJ0 200 aa24.95■■□□□ 1.59
CHTOP-204ENST00000368694 SCN11AQ9UI33 1791 aa24.95■■□□□ 1.58
CHTOP-204ENST00000368694 PHKG2P15735 406 aa24.95■■□□□ 1.58
CHTOP-204ENST00000368694 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.58
CHTOP-204ENST00000368694 JCADQ9P266 1359 aa24.94■■□□□ 1.58
CHTOP-204ENST00000368694 ADAMTS7Q9UKP4 1686 aa24.94■■□□□ 1.58
CHTOP-204ENST00000368694 PDE3AQ14432 1141 aa24.93■■□□□ 1.58
CHTOP-204ENST00000368694 B4GALNT3Q6L9W6 998 aa24.93■■□□□ 1.58
CHTOP-204ENST00000368694 KIF16BQ96L93 1317 aa24.93■■□□□ 1.58
CHTOP-204ENST00000368694 KDM3BQ7LBC6 1761 aa24.92■■□□□ 1.58
CHTOP-204ENST00000368694 ZKSCAN2Q63HK3 967 aa24.92■■□□□ 1.58
CHTOP-204ENST00000368694 NRAPQ86VF7 1730 aa24.92■■□□□ 1.58
CHTOP-204ENST00000368694 SIPA1L3O60292 1781 aaPredicted RBP24.92■■□□□ 1.58
CHTOP-204ENST00000368694 TCERG1O14776 1098 aaKnown RBP24.91■■□□□ 1.58
CHTOP-204ENST00000368694 CYP27B1O15528 508 aa24.91■■□□□ 1.58
CHTOP-204ENST00000368694 ZCRB1Q8TBF4 217 aaKnown RBP24.91■■□□□ 1.58
CHTOP-204ENST00000368694 PCDH11XQ9BZA7 1347 aa24.9■■□□□ 1.58
CHTOP-204ENST00000368694 PCDH11YQ9BZA8 1340 aa24.9■■□□□ 1.58
CHTOP-204ENST00000368694 PANK1Q8TE04 598 aa24.9■■□□□ 1.58
CHTOP-204ENST00000368694 NOB1Q9ULX3 412 aaKnown RBP24.9■■□□□ 1.58
CHTOP-204ENST00000368694 KDM6AO15550 1401 aaPredicted RBP24.9■■□□□ 1.58
CHTOP-204ENST00000368694 BTBD11A6QL63 1104 aa24.9■■□□□ 1.58
CHTOP-204ENST00000368694 CCDC136Q96JN2 1154 aa24.9■■□□□ 1.58
CHTOP-204ENST00000368694 NWD2Q9ULI1 1742 aa24.89■■□□□ 1.58
CHTOP-204ENST00000368694 CLUAP1Q96AJ1 413 aa24.89■■□□□ 1.58
CHTOP-204ENST00000368694 SHANK3Q9BYB0 1731 aa24.88■■□□□ 1.57
CHTOP-204ENST00000368694 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms