RNA–Protein interactions for RNA: ENST00000368638.4

LAMA4-203, Transcript of laminin subunit alpha 4, humanhuman

TSL 2 BASIC

Gene LAMA4, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-203ENST00000368638 NBPF4Q96M43 638 aa20.8■□□□□ 0.92
LAMA4-203ENST00000368638 ATF5Q9Y2D1 282 aaPredicted RBP20.8■□□□□ 0.92
LAMA4-203ENST00000368638 ANKRD26Q9UPS8 1709 aa20.8■□□□□ 0.92
LAMA4-203ENST00000368638 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
LAMA4-203ENST00000368638 CDCA8Q53HL2 280 aa20.79■□□□□ 0.92
LAMA4-203ENST00000368638 CARD14Q9BXL6 1004 aa20.79■□□□□ 0.92
LAMA4-203ENST00000368638 MTFR1LQ9H019 292 aa20.79■□□□□ 0.92
LAMA4-203ENST00000368638 INSRP06213 1382 aa20.79■□□□□ 0.92
LAMA4-203ENST00000368638 COL24A1Q17RW2 1714 aa20.78■□□□□ 0.92
LAMA4-203ENST00000368638 KIF24Q5T7B8 1368 aa20.78■□□□□ 0.92
LAMA4-203ENST00000368638 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
LAMA4-203ENST00000368638 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
LAMA4-203ENST00000368638 NSD3Q9BZ95 1437 aa20.78■□□□□ 0.92
LAMA4-203ENST00000368638 FLT4P35916 1363 aa20.77■□□□□ 0.92
LAMA4-203ENST00000368638 AKT1S1Q96B36 256 aa20.77■□□□□ 0.92
LAMA4-203ENST00000368638 PRIM1P49642 420 aaKnown RBP20.76■□□□□ 0.91
LAMA4-203ENST00000368638 SLC27A3Q5K4L6 730 aa20.76■□□□□ 0.91
LAMA4-203ENST00000368638 USHBP1Q8N6Y0 703 aa20.76■□□□□ 0.91
LAMA4-203ENST00000368638 HSP90AB2PQ58FF8 381 aa20.75■□□□□ 0.91
LAMA4-203ENST00000368638 CGNL1Q0VF96 1302 aa20.75■□□□□ 0.91
LAMA4-203ENST00000368638 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
LAMA4-203ENST00000368638 NCAPD2Q15021 1401 aa20.74■□□□□ 0.91
LAMA4-203ENST00000368638 PKD1L3Q7Z443 1732 aa20.74■□□□□ 0.91
LAMA4-203ENST00000368638 TOGARAM1Q9Y4F4 1720 aa20.73■□□□□ 0.91
LAMA4-203ENST00000368638 YY1P25490 414 aa20.73■□□□□ 0.91
LAMA4-203ENST00000368638 FHDC1Q9C0D6 1143 aaPredicted RBP20.73■□□□□ 0.91
LAMA4-203ENST00000368638 SYTL4Q96C24 671 aaPredicted RBP20.72■□□□□ 0.91
LAMA4-203ENST00000368638 ZEB1P37275 1124 aaPredicted RBP20.71■□□□□ 0.91
LAMA4-203ENST00000368638 KCNQ4P56696 695 aa20.71■□□□□ 0.91
LAMA4-203ENST00000368638 SYT17Q9BSW7 474 aa20.71■□□□□ 0.91
LAMA4-203ENST00000368638 EMILIN1Q9Y6C2 1016 aa20.71■□□□□ 0.91
LAMA4-203ENST00000368638 PNPLA7Q6ZV29 1317 aa20.71■□□□□ 0.91
LAMA4-203ENST00000368638 MAP3K5Q99683 1374 aa20.71■□□□□ 0.91
LAMA4-203ENST00000368638 RAPGEF4Q8WZA2 1011 aa20.7■□□□□ 0.9
LAMA4-203ENST00000368638 TATP17735 454 aaPredicted RBP20.69■□□□□ 0.9
LAMA4-203ENST00000368638 C5P01031 1676 aa20.68■□□□□ 0.9
LAMA4-203ENST00000368638 EIF4G2P78344 907 aaKnown RBP eCLIP20.68■□□□□ 0.9
LAMA4-203ENST00000368638 ARXQ96QS3 562 aa20.68■□□□□ 0.9
LAMA4-203ENST00000368638 POLR3GLQ9BT43 218 aa20.68■□□□□ 0.9
LAMA4-203ENST00000368638 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
LAMA4-203ENST00000368638 HSPA5P11021 654 aaKnown RBP20.67■□□□□ 0.9
LAMA4-203ENST00000368638 SLC16A10Q8TF71 515 aa20.67■□□□□ 0.9
LAMA4-203ENST00000368638 PCDH11XQ9BZA7 1347 aa20.67■□□□□ 0.9
LAMA4-203ENST00000368638 PCDH11YQ9BZA8 1340 aa20.67■□□□□ 0.9
LAMA4-203ENST00000368638 MAP2P11137 1827 aaKnown RBP20.67■□□□□ 0.9
LAMA4-203ENST00000368638 ITGB4P16144 1822 aa20.66■□□□□ 0.9
LAMA4-203ENST00000368638 TAF1LQ8IZX4 1826 aa20.65■□□□□ 0.9
LAMA4-203ENST00000368638 CYP27B1O15528 508 aa20.65■□□□□ 0.9
LAMA4-203ENST00000368638 CCNL1Q9UK58 526 aaPredicted RBP20.65■□□□□ 0.9
LAMA4-203ENST00000368638 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
LAMA4-203ENST00000368638 TFCP2L1Q9NZI6 479 aa20.63■□□□□ 0.89
LAMA4-203ENST00000368638 POLKQ9UBT6 870 aa20.61■□□□□ 0.89
LAMA4-203ENST00000368638 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
LAMA4-203ENST00000368638 PPM1GO15355 546 aaPredicted RBP20.59■□□□□ 0.89
LAMA4-203ENST00000368638 EYA1Q99502 592 aa20.59■□□□□ 0.89
LAMA4-203ENST00000368638 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
LAMA4-203ENST00000368638 NKX1-1Q15270 411 aaPredicted RBP20.58■□□□□ 0.89
LAMA4-203ENST00000368638 COL23A1Q86Y22 540 aaPredicted RBP20.58■□□□□ 0.89
LAMA4-203ENST00000368638 CHD4Q14839 1912 aa20.57■□□□□ 0.88
LAMA4-203ENST00000368638 POLD1P28340 1107 aa20.56■□□□□ 0.88
LAMA4-203ENST00000368638 MPRIPQ6WCQ1 1025 aa20.56■□□□□ 0.88
LAMA4-203ENST00000368638 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
LAMA4-203ENST00000368638 EIF4A2Q14240 407 aaKnown RBP20.54■□□□□ 0.88
LAMA4-203ENST00000368638 PIGBQ92521 554 aa20.54■□□□□ 0.88
LAMA4-203ENST00000368638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.54■□□□□ 0.88
LAMA4-203ENST00000368638 SPG7Q9UQ90 795 aa20.54■□□□□ 0.88
LAMA4-203ENST00000368638 PLEKHG2Q9H7P9 1386 aa20.54■□□□□ 0.88
LAMA4-203ENST00000368638 NLGN2Q8NFZ4 835 aa20.52■□□□□ 0.88
LAMA4-203ENST00000368638 PHKG2P15735 406 aa20.51■□□□□ 0.87
LAMA4-203ENST00000368638 TNNT2P45379 298 aaPredicted RBP20.51■□□□□ 0.87
LAMA4-203ENST00000368638 AMIGO3Q86WK7 504 aa20.51■□□□□ 0.87
LAMA4-203ENST00000368638 ZNF784Q8NCA9 323 aaPredicted RBP20.51■□□□□ 0.87
LAMA4-203ENST00000368638 SMARCC1Q92922 1105 aaPredicted RBP20.51■□□□□ 0.87
LAMA4-203ENST00000368638 UTRNP46939 3433 aa20.51■□□□□ 0.87
LAMA4-203ENST00000368638 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
LAMA4-203ENST00000368638 KLHL34Q8N239 644 aa20.5■□□□□ 0.87
LAMA4-203ENST00000368638 PANK3Q9H999 370 aa20.5■□□□□ 0.87
LAMA4-203ENST00000368638 MSH5O43196 834 aa20.49■□□□□ 0.87
LAMA4-203ENST00000368638 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
LAMA4-203ENST00000368638 IFNL2Q8IZJ0 200 aa20.48■□□□□ 0.87
LAMA4-203ENST00000368638 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
LAMA4-203ENST00000368638 GPR162Q16538 588 aa20.47■□□□□ 0.87
LAMA4-203ENST00000368638 FLAD1Q8NFF5 587 aa20.47■□□□□ 0.87
LAMA4-203ENST00000368638 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
LAMA4-203ENST00000368638 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
LAMA4-203ENST00000368638 LOC102724428A0A0B4J2F2 783 aa20.45■□□□□ 0.86
LAMA4-203ENST00000368638 SIK1P57059 783 aa20.45■□□□□ 0.86
LAMA4-203ENST00000368638 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
LAMA4-203ENST00000368638 ASAP1Q9ULH1 1129 aa20.45■□□□□ 0.86
LAMA4-203ENST00000368638 KDRP35968 1356 aa20.45■□□□□ 0.86
LAMA4-203ENST00000368638 ITPK1Q13572 414 aa20.44■□□□□ 0.86
LAMA4-203ENST00000368638 SMIM5Q71RC9 77 aa20.44■□□□□ 0.86
LAMA4-203ENST00000368638 AK7Q96M32 723 aa20.44■□□□□ 0.86
LAMA4-203ENST00000368638 YBX3P16989 372 aaKnown RBP eCLIP20.43■□□□□ 0.86
LAMA4-203ENST00000368638 ATG3Q9NT62 314 aa20.43■□□□□ 0.86
LAMA4-203ENST00000368638 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
LAMA4-203ENST00000368638 KDM6AO15550 1401 aaPredicted RBP20.43■□□□□ 0.86
LAMA4-203ENST00000368638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.42■□□□□ 0.86
LAMA4-203ENST00000368638 KIF7Q2M1P5 1343 aa20.42■□□□□ 0.86
LAMA4-203ENST00000368638 PHF14O94880 888 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms