RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 CCER1Q8TC90 406 aaPredicted RBP24.48■■□□□ 1.51
C1orf43-204ENST00000368518 ATF5Q9Y2D1 282 aaPredicted RBP24.48■■□□□ 1.51
C1orf43-204ENST00000368518 PRIM1P49642 420 aaKnown RBP24.46■■□□□ 1.51
C1orf43-204ENST00000368518 SHANK3Q9BYB0 1731 aa24.45■■□□□ 1.5
C1orf43-204ENST00000368518 PPM1GO15355 546 aaPredicted RBP24.45■■□□□ 1.5
C1orf43-204ENST00000368518 EMILIN1Q9Y6C2 1016 aa24.45■■□□□ 1.5
C1orf43-204ENST00000368518 INSRP06213 1382 aa24.44■■□□□ 1.5
C1orf43-204ENST00000368518 FLT4P35916 1363 aa24.44■■□□□ 1.5
C1orf43-204ENST00000368518 RAPGEF4Q8WZA2 1011 aa24.44■■□□□ 1.5
C1orf43-204ENST00000368518 LRRC4BQ9NT99 713 aa24.44■■□□□ 1.5
C1orf43-204ENST00000368518 DOT1LQ8TEK3 1739 aa24.44■■□□□ 1.5
C1orf43-204ENST00000368518 HSPA5P11021 654 aaKnown RBP24.41■■□□□ 1.5
C1orf43-204ENST00000368518 TATP17735 454 aaPredicted RBP24.41■■□□□ 1.5
C1orf43-204ENST00000368518 KCNQ4P56696 695 aa24.41■■□□□ 1.5
C1orf43-204ENST00000368518 ZNF827Q17R98 1081 aa24.41■■□□□ 1.5
C1orf43-204ENST00000368518 PAPPAQ13219 1627 aa24.41■■□□□ 1.5
C1orf43-204ENST00000368518 CGNL1Q0VF96 1302 aa24.4■■□□□ 1.5
C1orf43-204ENST00000368518 PTGER2P43116 358 aa24.4■■□□□ 1.5
C1orf43-204ENST00000368518 EIF4G2P78344 907 aaKnown RBP eCLIP24.4■■□□□ 1.5
C1orf43-204ENST00000368518 KIF24Q5T7B8 1368 aa24.39■■□□□ 1.49
C1orf43-204ENST00000368518 NSD2O96028 1365 aa24.38■■□□□ 1.49
C1orf43-204ENST00000368518 SLC27A3Q5K4L6 730 aa24.37■■□□□ 1.49
C1orf43-204ENST00000368518 MTFR1LQ9H019 292 aa24.37■■□□□ 1.49
C1orf43-204ENST00000368518 TNNT2P45379 298 aaPredicted RBP24.36■■□□□ 1.49
C1orf43-204ENST00000368518 MAP2P11137 1827 aaKnown RBP24.34■■□□□ 1.49
C1orf43-204ENST00000368518 DCAF8L1A6NGE4 600 aa24.34■■□□□ 1.49
C1orf43-204ENST00000368518 AKT1S1Q96B36 256 aa24.34■■□□□ 1.49
C1orf43-204ENST00000368518 PCDH11XQ9BZA7 1347 aa24.34■■□□□ 1.49
C1orf43-204ENST00000368518 PCDH11YQ9BZA8 1340 aa24.34■■□□□ 1.49
C1orf43-204ENST00000368518 PANK3Q9H999 370 aa24.32■■□□□ 1.48
C1orf43-204ENST00000368518 POLKQ9UBT6 870 aa24.32■■□□□ 1.48
C1orf43-204ENST00000368518 LY75O60449 1722 aa24.31■■□□□ 1.48
C1orf43-204ENST00000368518 TFCP2L1Q9NZI6 479 aa24.31■■□□□ 1.48
C1orf43-204ENST00000368518 CCNL1Q9UK58 526 aaPredicted RBP24.31■■□□□ 1.48
C1orf43-204ENST00000368518 ANKRD26Q9UPS8 1709 aa24.31■■□□□ 1.48
C1orf43-204ENST00000368518 WASHC2AQ641Q2 1341 aa24.31■■□□□ 1.48
C1orf43-204ENST00000368518 CYP27B1O15528 508 aa24.3■■□□□ 1.48
C1orf43-204ENST00000368518 SGIP1Q9BQI5 828 aa24.3■■□□□ 1.48
C1orf43-204ENST00000368518 FHDC1Q9C0D6 1143 aaPredicted RBP24.3■■□□□ 1.48
C1orf43-204ENST00000368518 EYA1Q99502 592 aa24.29■■□□□ 1.48
C1orf43-204ENST00000368518 MPRIPQ6WCQ1 1025 aa24.28■■□□□ 1.48
C1orf43-204ENST00000368518 ARXQ96QS3 562 aa24.27■■□□□ 1.48
C1orf43-204ENST00000368518 SYT17Q9BSW7 474 aa24.27■■□□□ 1.48
C1orf43-204ENST00000368518 PNPLA7Q6ZV29 1317 aa24.27■■□□□ 1.48
C1orf43-204ENST00000368518 YY1P25490 414 aa24.26■■□□□ 1.47
C1orf43-204ENST00000368518 TUBGCP6Q96RT7 1819 aa24.26■■□□□ 1.47
C1orf43-204ENST00000368518 PKD1L3Q7Z443 1732 aa24.25■■□□□ 1.47
C1orf43-204ENST00000368518 SPG7Q9UQ90 795 aa24.25■■□□□ 1.47
C1orf43-204ENST00000368518 QSER1Q2KHR3 1735 aa24.24■■□□□ 1.47
C1orf43-204ENST00000368518 EIF4A2Q14240 407 aaKnown RBP24.24■■□□□ 1.47
C1orf43-204ENST00000368518 NCAPD2Q15021 1401 aa24.24■■□□□ 1.47
C1orf43-204ENST00000368518 TOGARAM1Q9Y4F4 1720 aa24.24■■□□□ 1.47
C1orf43-204ENST00000368518 MSH5O43196 834 aa24.23■■□□□ 1.47
C1orf43-204ENST00000368518 SLC16A10Q8TF71 515 aa24.22■■□□□ 1.47
C1orf43-204ENST00000368518 PALLDQ8WX93 1383 aa24.21■■□□□ 1.47
C1orf43-204ENST00000368518 KLHL34Q8N239 644 aa24.21■■□□□ 1.47
C1orf43-204ENST00000368518 ITGB4P16144 1822 aa24.21■■□□□ 1.47
C1orf43-204ENST00000368518 POLD1P28340 1107 aa24.2■■□□□ 1.46
C1orf43-204ENST00000368518 MORC1Q86VD1 984 aa24.19■■□□□ 1.46
C1orf43-204ENST00000368518 PIGBQ92521 554 aa24.19■■□□□ 1.46
C1orf43-204ENST00000368518 C5P01031 1676 aa24.18■■□□□ 1.46
C1orf43-204ENST00000368518 NKX1-1Q15270 411 aaPredicted RBP24.18■■□□□ 1.46
C1orf43-204ENST00000368518 COL23A1Q86Y22 540 aaPredicted RBP24.18■■□□□ 1.46
C1orf43-204ENST00000368518 SMARCC1Q92922 1105 aaPredicted RBP24.16■■□□□ 1.46
C1orf43-204ENST00000368518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.16■■□□□ 1.462e-6■■■■□ 24.3
C1orf43-204ENST00000368518 KNSTRNQ9Y448 316 aa24.16■■□□□ 1.46
C1orf43-204ENST00000368518 PHKG2P15735 406 aa24.15■■□□□ 1.46
C1orf43-204ENST00000368518 IFNL2Q8IZJ0 200 aa24.15■■□□□ 1.46
C1orf43-204ENST00000368518 MSL1Q68DK7 614 aa24.14■■□□□ 1.45
C1orf43-204ENST00000368518 TMOD3Q9NYL9 352 aa24.14■■□□□ 1.45
C1orf43-204ENST00000368518 TAF1LQ8IZX4 1826 aa24.13■■□□□ 1.45
C1orf43-204ENST00000368518 UTRNP46939 3433 aa24.13■■□□□ 1.45
C1orf43-204ENST00000368518 IGSF1Q8N6C5 1336 aa24.12■■□□□ 1.45
C1orf43-204ENST00000368518 MAP3K5Q99683 1374 aa24.12■■□□□ 1.45
C1orf43-204ENST00000368518 COL24A1Q17RW2 1714 aa24.12■■□□□ 1.45
C1orf43-204ENST00000368518 KIF7Q2M1P5 1343 aa24.11■■□□□ 1.45
C1orf43-204ENST00000368518 ASAP1Q9ULH1 1129 aa24.11■■□□□ 1.45
C1orf43-204ENST00000368518 SMIM5Q71RC9 77 aa24.1■■□□□ 1.45
C1orf43-204ENST00000368518 AK7Q96M32 723 aa24.1■■□□□ 1.45
C1orf43-204ENST00000368518 C4BP0C0L5 1744 aa24.1■■□□□ 1.45
C1orf43-204ENST00000368518 LOC102724428A0A0B4J2F2 783 aa24.08■■□□□ 1.45
C1orf43-204ENST00000368518 PHF14O94880 888 aa24.08■■□□□ 1.45
C1orf43-204ENST00000368518 HMGB2P26583 209 aaKnown RBP24.08■■□□□ 1.45
C1orf43-204ENST00000368518 SIK1P57059 783 aa24.08■■□□□ 1.45
C1orf43-204ENST00000368518 GPR162Q16538 588 aa24.08■■□□□ 1.45
C1orf43-204ENST00000368518 AEBP1Q8IUX7 1158 aa24.08■■□□□ 1.45
C1orf43-204ENST00000368518 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
C1orf43-204ENST00000368518 PLEKHO1Q53GL0 409 aaPredicted RBP24.07■■□□□ 1.44
C1orf43-204ENST00000368518 AMIGO3Q86WK7 504 aa24.07■■□□□ 1.44
C1orf43-204ENST00000368518 NLGN2Q8NFZ4 835 aa24.07■■□□□ 1.44
C1orf43-204ENST00000368518 ZNF530Q6P9A1 599 aaPredicted RBP24.06■■□□□ 1.44
C1orf43-204ENST00000368518 LINC00116Q8NCU8 138 aa24.06■■□□□ 1.44
C1orf43-204ENST00000368518 FLAD1Q8NFF5 587 aa24.06■■□□□ 1.44
C1orf43-204ENST00000368518 AMER1Q5JTC6 1135 aaPredicted RBP24.05■■□□□ 1.44
C1orf43-204ENST00000368518 ATG3Q9NT62 314 aa24.05■■□□□ 1.44
C1orf43-204ENST00000368518 ATP6V1AP38606 617 aa24.04■■□□□ 1.44
C1orf43-204ENST00000368518 ITPK1Q13572 414 aa24.04■■□□□ 1.44
C1orf43-204ENST00000368518 SULT6B1Q6IMI4 303 aa24.03■■□□□ 1.44
C1orf43-204ENST00000368518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.02■■□□□ 1.44
C1orf43-204ENST00000368518 HSP90AB1P08238 724 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms