RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
LMNA-203ENST00000368297 CALD1Q05682 793 aaKnown RBP20.73■□□□□ 0.91
LMNA-203ENST00000368297 NRAPQ86VF7 1730 aa20.73■□□□□ 0.91
LMNA-203ENST00000368297 MEGF6O75095 1541 aa20.73■□□□□ 0.91
LMNA-203ENST00000368297 ZNF530Q6P9A1 599 aaPredicted RBP20.73■□□□□ 0.91
LMNA-203ENST00000368297 C8orf37Q96NL8 207 aa20.73■□□□□ 0.91
LMNA-203ENST00000368297 THUMPD2Q9BTF0 503 aaKnown RBP20.73■□□□□ 0.91
LMNA-203ENST00000368297 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
LMNA-203ENST00000368297 NWD2Q9ULI1 1742 aa20.73■□□□□ 0.91
LMNA-203ENST00000368297 MAP3K5Q99683 1374 aa20.72■□□□□ 0.91
LMNA-203ENST00000368297 PARP4Q9UKK3 1724 aaKnown RBP20.72■□□□□ 0.91
LMNA-203ENST00000368297 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
LMNA-203ENST00000368297 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
LMNA-203ENST00000368297 NGLY1Q96IV0 654 aa20.72■□□□□ 0.91
LMNA-203ENST00000368297 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
LMNA-203ENST00000368297 LRP6O75581 1613 aa20.72■□□□□ 0.91
LMNA-203ENST00000368297 IL16Q14005 1332 aa20.71■□□□□ 0.91
LMNA-203ENST00000368297 MEX3CQ5U5Q3 659 aaKnown RBP20.71■□□□□ 0.91
LMNA-203ENST00000368297 DUSP27Q5VZP5 1158 aa20.71■□□□□ 0.91
LMNA-203ENST00000368297 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
LMNA-203ENST00000368297 FKBP8Q14318 412 aa20.7■□□□□ 0.91
LMNA-203ENST00000368297 MCM10Q7L590 875 aa20.7■□□□□ 0.91
LMNA-203ENST00000368297 SPG7Q9UQ90 795 aa20.7■□□□□ 0.91
LMNA-203ENST00000368297 SLIT2O94813 1529 aa20.7■□□□□ 0.9
LMNA-203ENST00000368297 HTATSF1O43719 755 aaKnown RBP20.7■□□□□ 0.9
LMNA-203ENST00000368297 C1orf141Q5JVX7 400 aa20.7■□□□□ 0.9
LMNA-203ENST00000368297 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
LMNA-203ENST00000368297 LAS1LQ9Y4W2 734 aaKnown RBP20.7■□□□□ 0.9
LMNA-203ENST00000368297 IL2RBP14784 551 aa20.68■□□□□ 0.9
LMNA-203ENST00000368297 AKAP4Q5JQC9 854 aa20.68■□□□□ 0.9
LMNA-203ENST00000368297 PLEKHG2Q9H7P9 1386 aa20.68■□□□□ 0.9
LMNA-203ENST00000368297 PKD1L3Q7Z443 1732 aa20.67■□□□□ 0.9
LMNA-203ENST00000368297 OVOS2A0A0G2JMS6 1433 aa20.67■□□□□ 0.9
LMNA-203ENST00000368297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
LMNA-203ENST00000368297 CCDC9Q9Y3X0 531 aaKnown RBP20.67■□□□□ 0.9
LMNA-203ENST00000368297 GNAI1P63096 354 aa20.66■□□□□ 0.9
LMNA-203ENST00000368297 UNC5CLQ8IV45 518 aa20.65■□□□□ 0.9
LMNA-203ENST00000368297 TSR2Q969E8 191 aaKnown RBP20.65■□□□□ 0.9
LMNA-203ENST00000368297 IFT57Q9NWB7 429 aa20.65■□□□□ 0.9
LMNA-203ENST00000368297 FANCIQ9NVI1 1328 aa20.65■□□□□ 0.9
LMNA-203ENST00000368297 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
LMNA-203ENST00000368297 LRRC37A3O60309 1634 aa20.63■□□□□ 0.89
LMNA-203ENST00000368297 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
LMNA-203ENST00000368297 CFAP44Q96MT7 982 aa20.63■□□□□ 0.89
LMNA-203ENST00000368297 WNK3Q9BYP7 1800 aa20.63■□□□□ 0.89
LMNA-203ENST00000368297 MPRIPQ6WCQ1 1025 aa20.62■□□□□ 0.89
LMNA-203ENST00000368297 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
LMNA-203ENST00000368297 FNBP4Q8N3X1 1017 aaPredicted RBP20.62■□□□□ 0.89
LMNA-203ENST00000368297 SPATA31A1Q5TZJ5 1347 aa20.62■□□□□ 0.89
LMNA-203ENST00000368297 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
LMNA-203ENST00000368297 PHKG2P15735 406 aa20.61■□□□□ 0.89
LMNA-203ENST00000368297 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
LMNA-203ENST00000368297 USP21Q9UK80 565 aa20.61■□□□□ 0.89
LMNA-203ENST00000368297 RCAN3Q9UKA8 241 aa20.61■□□□□ 0.89
LMNA-203ENST00000368297 BCL9LQ86UU0 1499 aa20.61■□□□□ 0.89
LMNA-203ENST00000368297 ZNF853P0CG23 659 aa20.61■□□□□ 0.89
LMNA-203ENST00000368297 ERICH6BQ5W0A0 696 aa20.61■□□□□ 0.89
LMNA-203ENST00000368297 LGR6Q9HBX8 967 aa20.61■□□□□ 0.89
LMNA-203ENST00000368297 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
LMNA-203ENST00000368297 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
LMNA-203ENST00000368297 PCDH11XQ9BZA7 1347 aa20.6■□□□□ 0.89
LMNA-203ENST00000368297 PCDH11YQ9BZA8 1340 aa20.6■□□□□ 0.89
LMNA-203ENST00000368297 MBIPQ9NS73 344 aa20.6■□□□□ 0.89
LMNA-203ENST00000368297 THRAP3Q9Y2W1 955 aaKnown RBP20.6■□□□□ 0.89
LMNA-203ENST00000368297 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.6■□□□□ 0.89
LMNA-203ENST00000368297 DISP2A7MBM2 1401 aa20.6■□□□□ 0.89
LMNA-203ENST00000368297 RNMTO43148 476 aaKnown RBP20.59■□□□□ 0.89
LMNA-203ENST00000368297 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
LMNA-203ENST00000368297 CYP27B1O15528 508 aa20.58■□□□□ 0.89
LMNA-203ENST00000368297 TEFQ10587 303 aa20.58■□□□□ 0.89
LMNA-203ENST00000368297 VPS72Q15906 364 aa20.58■□□□□ 0.89
LMNA-203ENST00000368297 FBXO41Q8TF61 875 aa20.58■□□□□ 0.89
LMNA-203ENST00000368297 AFF2P51816 1311 aa20.58■□□□□ 0.89
LMNA-203ENST00000368297 CEMIPQ8WUJ3 1361 aa20.58■□□□□ 0.89
LMNA-203ENST00000368297 HSP90AB1P08238 724 aaKnown RBP20.58■□□□□ 0.88
LMNA-203ENST00000368297 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.88
LMNA-203ENST00000368297 CDCA7Q9BWT1 371 aaPredicted RBP20.58■□□□□ 0.88
LMNA-203ENST00000368297 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.88
LMNA-203ENST00000368297 CHL1O00533 1208 aa20.57■□□□□ 0.88
LMNA-203ENST00000368297 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
LMNA-203ENST00000368297 SCN11AQ9UI33 1791 aa20.56■□□□□ 0.88
LMNA-203ENST00000368297 TAF7Q15545 349 aaPredicted RBP20.56■□□□□ 0.88
LMNA-203ENST00000368297 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
LMNA-203ENST00000368297 ADAMTS7Q9UKP4 1686 aa20.56■□□□□ 0.88
LMNA-203ENST00000368297 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
LMNA-203ENST00000368297 EXOC5O00471 708 aa20.54■□□□□ 0.88
LMNA-203ENST00000368297 DCAF5Q96JK2 942 aa20.54■□□□□ 0.88
LMNA-203ENST00000368297 BARGINQ6ZT62 677 aa20.54■□□□□ 0.88
LMNA-203ENST00000368297 CT47B1P0C2W7 299 aaPredicted RBP20.52■□□□□ 0.88
LMNA-203ENST00000368297 BABAM1Q9NWV8 329 aa20.52■□□□□ 0.88
LMNA-203ENST00000368297 TNS2Q63HR2 1409 aa20.52■□□□□ 0.88
LMNA-203ENST00000368297 DDB1Q16531 1140 aa20.51■□□□□ 0.87
LMNA-203ENST00000368297 FAM98CQ17RN3 349 aaKnown RBP20.51■□□□□ 0.87
LMNA-203ENST00000368297 SIPA1L3O60292 1781 aaPredicted RBP20.51■□□□□ 0.87
LMNA-203ENST00000368297 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
LMNA-203ENST00000368297 RNF123Q5XPI4 1314 aa20.49■□□□□ 0.87
LMNA-203ENST00000368297 A0A0G2JS52 829 aa20.49■□□□□ 0.87
LMNA-203ENST00000368297 ELL2O00472 640 aaPredicted RBP20.49■□□□□ 0.87
LMNA-203ENST00000368297 MYT1Q01538 1121 aa20.49■□□□□ 0.87
LMNA-203ENST00000368297 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms