RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 IL13P35225 146 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 MRE11P49959 708 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 RNF214Q8ND24 703 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 ARHGAP45Q92619 1136 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 SYTL4Q96C24 671 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-206ENST00000368215 ARID3AQ99856 593 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 MTHFSDQ2M296 383 aaKnown RBP10.26□□□□□ -0.77
PTPRK-206ENST00000368215 SMC5Q8IY18 1101 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
PTPRK-206ENST00000368215 FSD1Q9BTV5 496 aa10.26□□□□□ -0.77
PTPRK-206ENST00000368215 UPF3BQ9BZI7 483 aaKnown RBP10.26□□□□□ -0.77
PTPRK-206ENST00000368215 GNL2Q13823 731 aaKnown RBP10.25□□□□□ -0.77
PTPRK-206ENST00000368215 MX1P20591 662 aa10.25□□□□□ -0.77
PTPRK-206ENST00000368215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.25□□□□□ -0.77
PTPRK-206ENST00000368215 FOSBP53539 338 aa10.25□□□□□ -0.77
PTPRK-206ENST00000368215 CLTCL1P53675 1640 aa10.25□□□□□ -0.77
PTPRK-206ENST00000368215 SYNMO15061 1565 aa10.25□□□□□ -0.77
PTPRK-206ENST00000368215 CWC27Q6UX04 472 aaKnown RBP10.25□□□□□ -0.77
PTPRK-206ENST00000368215 H3BQV1 296 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-206ENST00000368215 KIAA2012Q0VF49 1180 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 UNC13BO14795 1591 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 MYOM2P54296 1465 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 SSFA2P28290 1259 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 FAM184AQ8NB25 1140 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 PTPRCP08575 1304 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-206ENST00000368215 PHF14O94880 888 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-206ENST00000368215 DNAJC2Q99543 621 aaKnown RBP10.24□□□□□ -0.77
PTPRK-206ENST00000368215 ATP6V1DQ9Y5K8 247 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 MAP3K19Q56UN5 1328 aa10.24□□□□□ -0.77
PTPRK-206ENST00000368215 EYA1Q99502 592 aa10.23□□□□□ -0.77
PTPRK-206ENST00000368215 STRN4Q9NRL3 753 aa10.23□□□□□ -0.77
PTPRK-206ENST00000368215 TOMM22Q9NS69 142 aa10.23□□□□□ -0.77
PTPRK-206ENST00000368215 ZFYVE9O95405 1425 aa10.23□□□□□ -0.77
PTPRK-206ENST00000368215 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
PTPRK-206ENST00000368215 TNPO1Q92973 898 aaKnown RBP10.23□□□□□ -0.77
PTPRK-206ENST00000368215 TTC22Q5TAA0 569 aa10.23□□□□□ -0.77
PTPRK-206ENST00000368215 AACSQ86V21 672 aa10.23□□□□□ -0.77
PTPRK-206ENST00000368215 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
PTPRK-206ENST00000368215 RNF20Q5VTR2 975 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 KCNH5Q8NCM2 988 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 CIZ1Q9ULV3 898 aaPredicted RBP10.22□□□□□ -0.77
PTPRK-206ENST00000368215 SDSP20132 328 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 ANKRD44Q8N8A2 993 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 PLEKHF1Q96S99 279 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 NEO1Q92859 1461 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 G2E3Q7L622 706 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 PI4KAP2A4QPH2 592 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 HTATSF1O43719 755 aaKnown RBP10.22□□□□□ -0.77
PTPRK-206ENST00000368215 KCNA6P17658 529 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 PI4KAP1Q8N8J0 262 aa10.22□□□□□ -0.77
PTPRK-206ENST00000368215 GRPEL1Q9HAV7 217 aa10.21□□□□□ -0.77
PTPRK-206ENST00000368215 DNAAF4Q8WXU2 420 aa10.21□□□□□ -0.77
PTPRK-206ENST00000368215 LARP6Q9BRS8 491 aaKnown RBP10.21□□□□□ -0.77
PTPRK-206ENST00000368215 MLH3Q9UHC1 1453 aa10.21□□□□□ -0.77
PTPRK-206ENST00000368215 OTUD7AQ8TE49 926 aaPredicted RBP10.21□□□□□ -0.78
PTPRK-206ENST00000368215 TET3O43151 1660 aa10.21□□□□□ -0.78
PTPRK-206ENST00000368215 FIBPO43427 364 aa10.21□□□□□ -0.78
PTPRK-206ENST00000368215 MCM2P49736 904 aa10.21□□□□□ -0.78
PTPRK-206ENST00000368215 CABP4P57796 275 aa10.21□□□□□ -0.78
PTPRK-206ENST00000368215 LRRC59Q96AG4 307 aaKnown RBP10.21□□□□□ -0.78
PTPRK-206ENST00000368215 KIF1BO60333 1816 aa10.2□□□□□ -0.78
PTPRK-206ENST00000368215 TTC21AQ8NDW8 1320 aa10.2□□□□□ -0.78
PTPRK-206ENST00000368215 EDC4Q6P2E9 1401 aaKnown RBP10.2□□□□□ -0.78
PTPRK-206ENST00000368215 CEP85Q6P2H3 762 aa10.2□□□□□ -0.78
PTPRK-206ENST00000368215 PPP1R42Q7Z4L9 355 aa10.2□□□□□ -0.78
PTPRK-206ENST00000368215 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
PTPRK-206ENST00000368215 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
PTPRK-206ENST00000368215 LTKP29376 864 aa10.2□□□□□ -0.78
PTPRK-206ENST00000368215 TOM1L2Q6ZVM7 507 aa10.2□□□□□ -0.78
PTPRK-206ENST00000368215 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
PTPRK-206ENST00000368215 ERC1Q8IUD2 1116 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 DCTPP1Q9H773 170 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 METP08581 1390 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 APPP05067 770 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 CHAF1AQ13111 956 aaPredicted RBP10.19□□□□□ -0.78
PTPRK-206ENST00000368215 STK3Q13188 491 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 PLEKHM2Q8IWE5 1019 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 MPNDQ8N594 471 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 SPG7Q9UQ90 795 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.19□□□□□ -0.78
PTPRK-206ENST00000368215 PRDM11Q9NQV5 511 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 CHPF2Q9P2E5 772 aa10.19□□□□□ -0.78
PTPRK-206ENST00000368215 E9PCH4 1651 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 FLT4P35916 1363 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 FAM177BA6PVY3 158 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 WASHC4Q2M389 1173 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 BICD2Q8TD16 824 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 CCDC8Q9H0W5 538 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-206ENST00000368215 GOLGA6L6A8MZA4 724 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 GTF2E1P29083 439 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-206ENST00000368215 PDE1AP54750 535 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 JARID2Q92833 1246 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-206ENST00000368215 JAKMIP1Q96N16 626 aaKnown RBP10.18□□□□□ -0.78
PTPRK-206ENST00000368215 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms