RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NPC1L1Q9UHC9 1359 aa15.02■□□□□ -0
USF1-201ENST00000368019 SOX12O15370 315 aa15.02■□□□□ -0
USF1-201ENST00000368019 SPON1Q9HCB6 807 aa15.02■□□□□ -0
USF1-201ENST00000368019 ANO8Q9HCE9 1232 aaPredicted RBP15.02■□□□□ -0
USF1-201ENST00000368019 EXOC5O00471 708 aa15□□□□□ -0.01
USF1-201ENST00000368019 CSB-PGBD3P0DP91 1061 aa15□□□□□ -0.01
USF1-201ENST00000368019 TESK2Q96S53 571 aa15□□□□□ -0.01
USF1-201ENST00000368019 VIRMAQ69YN4 1812 aaKnown RBP15□□□□□ -0.01
USF1-201ENST00000368019 TMF1P82094 1093 aa14.99□□□□□ -0.01
USF1-201ENST00000368019 NME9Q86XW9 330 aa14.99□□□□□ -0.01
USF1-201ENST00000368019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
USF1-201ENST00000368019 NHSQ6T4R5 1651 aa14.99□□□□□ -0.01
USF1-201ENST00000368019 TNS2Q63HR2 1409 aa14.99□□□□□ -0.01
USF1-201ENST00000368019 KAT6BQ8WYB5 2073 aa14.99□□□□□ -0.01
USF1-201ENST00000368019 ERBB3P21860 1342 aa14.98□□□□□ -0.01
USF1-201ENST00000368019 NBR1Q14596 966 aa14.98□□□□□ -0.01
USF1-201ENST00000368019 PDGFDQ9GZP0 370 aaPredicted RBP14.98□□□□□ -0.01
USF1-201ENST00000368019 SLC12A5Q9H2X9 1139 aa14.98□□□□□ -0.01
USF1-201ENST00000368019 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
USF1-201ENST00000368019 TXNRD1Q16881 649 aa14.97□□□□□ -0.01
USF1-201ENST00000368019 PUS7Q96PZ0 661 aaKnown RBP14.97□□□□□ -0.01
USF1-201ENST00000368019 EDC4Q6P2E9 1401 aaKnown RBP14.96□□□□□ -0.01
USF1-201ENST00000368019 NGEFQ8N5V2 710 aa14.96□□□□□ -0.01
USF1-201ENST00000368019 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
USF1-201ENST00000368019 PPP1R1BQ9UD71 204 aaPredicted RBP14.95□□□□□ -0.02
USF1-201ENST00000368019 MYOM1P52179 1685 aa14.95□□□□□ -0.02
USF1-201ENST00000368019 BTAF1O14981 1849 aa14.94□□□□□ -0.02
USF1-201ENST00000368019 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
USF1-201ENST00000368019 CDCA8Q53HL2 280 aa14.94□□□□□ -0.02
USF1-201ENST00000368019 CENPQQ7L2Z9 268 aaPredicted RBP14.94□□□□□ -0.02
USF1-201ENST00000368019 HDGFL2Q7Z4V5 671 aaPredicted RBP14.94□□□□□ -0.02
USF1-201ENST00000368019 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
USF1-201ENST00000368019 IL2RBP14784 551 aa14.93□□□□□ -0.02
USF1-201ENST00000368019 PTGER2P43116 358 aa14.93□□□□□ -0.02
USF1-201ENST00000368019 SLC15A2Q16348 729 aa14.93□□□□□ -0.02
USF1-201ENST00000368019 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
USF1-201ENST00000368019 NLRP2Q9NX02 1062 aa14.93□□□□□ -0.02
USF1-201ENST00000368019 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
USF1-201ENST00000368019 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
USF1-201ENST00000368019 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
USF1-201ENST00000368019 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
USF1-201ENST00000368019 FAM208AQ9UK61 1670 aaKnown RBP14.92□□□□□ -0.02
USF1-201ENST00000368019 ZBTB7AO95365 584 aa14.91□□□□□ -0.02
USF1-201ENST00000368019 STK32BQ9NY57 414 aa14.91□□□□□ -0.02
USF1-201ENST00000368019 YY1P25490 414 aa14.9□□□□□ -0.02
USF1-201ENST00000368019 IP6K1Q92551 441 aa14.9□□□□□ -0.02
USF1-201ENST00000368019 ACSBG1Q96GR2 724 aa14.9□□□□□ -0.02
USF1-201ENST00000368019 CRBNQ96SW2 442 aa14.9□□□□□ -0.02
USF1-201ENST00000368019 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
USF1-201ENST00000368019 SGIP1Q9BQI5 828 aa14.89□□□□□ -0.03
USF1-201ENST00000368019 PANK3Q9H999 370 aa14.89□□□□□ -0.03
USF1-201ENST00000368019 ATF5Q9Y2D1 282 aaPredicted RBP14.89□□□□□ -0.03
USF1-201ENST00000368019 CDCA7LQ96GN5 454 aa14.88□□□□□ -0.03
USF1-201ENST00000368019 QSER1Q2KHR3 1735 aa14.87□□□□□ -0.03
USF1-201ENST00000368019 SHANK3Q9BYB0 1731 aa14.87□□□□□ -0.03
USF1-201ENST00000368019 MTFR1LQ9H019 292 aa14.87□□□□□ -0.03
USF1-201ENST00000368019 NEFMP07197 916 aa14.86□□□□□ -0.03
USF1-201ENST00000368019 DUSP27Q5VZP5 1158 aa14.86□□□□□ -0.03
USF1-201ENST00000368019 TRMT2AQ8IZ69 625 aaKnown RBP14.86□□□□□ -0.03
USF1-201ENST00000368019 LRRC4BQ9NT99 713 aa14.86□□□□□ -0.03
USF1-201ENST00000368019 MAP3K19Q56UN5 1328 aa14.86□□□□□ -0.03
USF1-201ENST00000368019 COL24A1Q17RW2 1714 aa14.86□□□□□ -0.03
USF1-201ENST00000368019 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
USF1-201ENST00000368019 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
USF1-201ENST00000368019 CNGB1Q14028 1251 aaPredicted RBP14.85□□□□□ -0.03
USF1-201ENST00000368019 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
USF1-201ENST00000368019 CHD4Q14839 1912 aa14.85□□□□□ -0.03
USF1-201ENST00000368019 LY75O60449 1722 aa14.84□□□□□ -0.03
USF1-201ENST00000368019 FBLN1P23142 703 aa14.84□□□□□ -0.03
USF1-201ENST00000368019 HOXC9P31274 260 aa14.84□□□□□ -0.03
USF1-201ENST00000368019 GOLGA2Q08379 1002 aa14.84□□□□□ -0.03
USF1-201ENST00000368019 ZNF827Q17R98 1081 aa14.84□□□□□ -0.03
USF1-201ENST00000368019 SYT17Q9BSW7 474 aa14.84□□□□□ -0.03
USF1-201ENST00000368019 TUBGCP6Q96RT7 1819 aa14.83□□□□□ -0.04
USF1-201ENST00000368019 AAMPQ13685 434 aa14.83□□□□□ -0.04
USF1-201ENST00000368019 WDR43Q15061 677 aaKnown RBP eCLIP14.83□□□□□ -0.04
USF1-201ENST00000368019 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
USF1-201ENST00000368019 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
USF1-201ENST00000368019 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
USF1-201ENST00000368019 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
USF1-201ENST00000368019 COG3Q96JB2 828 aa14.83□□□□□ -0.04
USF1-201ENST00000368019 FHDC1Q9C0D6 1143 aaPredicted RBP14.83□□□□□ -0.04
USF1-201ENST00000368019 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
USF1-201ENST00000368019 ANKRD36BQ8N2N9 1353 aa14.83□□□□□ -0.04
USF1-201ENST00000368019 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.04
USF1-201ENST00000368019 UTRNP46939 3433 aa14.82□□□□□ -0.04
USF1-201ENST00000368019 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
USF1-201ENST00000368019 DDX54Q8TDD1 881 aaKnown RBP14.82□□□□□ -0.04
USF1-201ENST00000368019 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
USF1-201ENST00000368019 SLC27A3Q5K4L6 730 aa14.81□□□□□ -0.04
USF1-201ENST00000368019 ADAMTS8Q9UP79 889 aa14.81□□□□□ -0.04
USF1-201ENST00000368019 MAP3K5Q99683 1374 aa14.81□□□□□ -0.04
USF1-201ENST00000368019 FYB1O15117 783 aa14.8□□□□□ -0.04
USF1-201ENST00000368019 AMPHP49418 695 aa14.8□□□□□ -0.04
USF1-201ENST00000368019 ARXQ96QS3 562 aa14.8□□□□□ -0.04
USF1-201ENST00000368019 NSD2O96028 1365 aa14.8□□□□□ -0.04
USF1-201ENST00000368019 MEGF6O75095 1541 aa14.8□□□□□ -0.04
USF1-201ENST00000368019 RTL1A6NKG5 1358 aa14.79□□□□□ -0.04
USF1-201ENST00000368019 PRIM1P49642 420 aaKnown RBP14.79□□□□□ -0.04
USF1-201ENST00000368019 ZCRB1Q8TBF4 217 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms