RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 KIF6Q6ZMV9 814 aa15.67■□□□□ 0.1
EDEM3-202ENST00000367512 TMCO5BA8MYB1 307 aa15.67■□□□□ 0.1
EDEM3-202ENST00000367512 BLOC1S2Q6QNY1 142 aa15.67■□□□□ 0.1
EDEM3-202ENST00000367512 IL1RAPL2Q9NP60 686 aa15.67■□□□□ 0.1
EDEM3-202ENST00000367512 ANKRD1Q15327 319 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 SFPQP23246 707 aaKnown RBP eCLIP15.66■□□□□ 0.1
EDEM3-202ENST00000367512 LMAN1P49257 510 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 UBA5Q9GZZ9 404 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 BMP2KQ9NSY1 1161 aaPredicted RBP15.66■□□□□ 0.1
EDEM3-202ENST00000367512 STAMBPO95630 424 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 MYL6BP14649 208 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 SMC1AQ14683 1233 aaKnown RBP15.66■□□□□ 0.1
EDEM3-202ENST00000367512 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
EDEM3-202ENST00000367512 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.66■□□□□ 0.18e-7■■■■■ 37.5
EDEM3-202ENST00000367512 ZSWIM4Q9H7M6 989 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 MPHOSPH10O00566 681 aaKnown RBP15.66■□□□□ 0.1
EDEM3-202ENST00000367512 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
EDEM3-202ENST00000367512 ZNF397Q8NF99 534 aaPredicted RBP15.66■□□□□ 0.1
EDEM3-202ENST00000367512 BACH2Q9BYV9 841 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 KIF5CO60282 957 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 LIG1P18858 919 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 GUCY1B3Q02153 619 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 SPECC1Q5M775 1068 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 AACSQ86V21 672 aa15.66■□□□□ 0.1
EDEM3-202ENST00000367512 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
EDEM3-202ENST00000367512 CCDC57Q2TAC2 916 aa15.65■□□□□ 0.1
EDEM3-202ENST00000367512 SKAP1Q86WV1 359 aa15.65■□□□□ 0.1
EDEM3-202ENST00000367512 CARMIL2Q6F5E8 1435 aa15.65■□□□□ 0.1
EDEM3-202ENST00000367512 GCC1Q96CN9 775 aa15.65■□□□□ 0.1
EDEM3-202ENST00000367512 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.65■□□□□ 0.1
EDEM3-202ENST00000367512 CASTP20810 708 aaKnown RBP15.65■□□□□ 0.1
EDEM3-202ENST00000367512 CCDC83Q8IWF9 413 aa15.65■□□□□ 0.1
EDEM3-202ENST00000367512 GBP3Q9H0R5 595 aa15.65■□□□□ 0.1
EDEM3-202ENST00000367512 CALCOCO1Q9P1Z2 691 aa15.64■□□□□ 0.09
EDEM3-202ENST00000367512 KIF18AQ8NI77 898 aa15.64■□□□□ 0.09
EDEM3-202ENST00000367512 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
EDEM3-202ENST00000367512 TDO2P48775 406 aa15.64■□□□□ 0.09
EDEM3-202ENST00000367512 HLTFQ14527 1009 aaKnown RBP eCLIP15.64■□□□□ 0.09
EDEM3-202ENST00000367512 NACAP1Q9BZK3 213 aa15.64■□□□□ 0.09
EDEM3-202ENST00000367512 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
EDEM3-202ENST00000367512 TMEM132EQ6IEE7 984 aa15.64■□□□□ 0.09
EDEM3-202ENST00000367512 ZSCAN29Q8IWY8 852 aaPredicted RBP15.63■□□□□ 0.09
EDEM3-202ENST00000367512 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
EDEM3-202ENST00000367512 LARP6Q9BRS8 491 aaKnown RBP15.63■□□□□ 0.09
EDEM3-202ENST00000367512 CCDC175P0C221 793 aa15.63■□□□□ 0.09
EDEM3-202ENST00000367512 CACNA2D4Q7Z3S7 1137 aa15.63■□□□□ 0.09
EDEM3-202ENST00000367512 ERC1Q8IUD2 1116 aa15.63■□□□□ 0.09
EDEM3-202ENST00000367512 SMARCC1Q92922 1105 aaPredicted RBP15.63■□□□□ 0.09
EDEM3-202ENST00000367512 CCDC96Q2M329 555 aa15.63■□□□□ 0.09
EDEM3-202ENST00000367512 MNAT1P51948 309 aa15.63■□□□□ 0.09
EDEM3-202ENST00000367512 USP25Q9UHP3 1055 aa15.63■□□□□ 0.09
EDEM3-202ENST00000367512 NUTM1Q86Y26 1132 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 DRC1Q96MC2 740 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 UBAC1Q9BSL1 405 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 NLRP6P59044 892 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 CTR9Q6PD62 1173 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 MAATS1Q7Z4T9 603 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 MAP9Q49MG5 647 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 TOP1P11387 765 aaKnown RBP15.62■□□□□ 0.09
EDEM3-202ENST00000367512 DESP17661 470 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 RNF216Q9NWF9 866 aaPredicted RBP15.62■□□□□ 0.09
EDEM3-202ENST00000367512 TRMT1LQ7Z2T5 733 aaKnown RBP15.62■□□□□ 0.09
EDEM3-202ENST00000367512 CCDC82Q8N4S0 544 aa15.62■□□□□ 0.09
EDEM3-202ENST00000367512 NUP88Q99567 741 aaPredicted RBP15.62■□□□□ 0.09
EDEM3-202ENST00000367512 LARP1Q6PKG0 1096 aaKnown RBP15.61■□□□□ 0.09
EDEM3-202ENST00000367512 ZSCAN12O43309 604 aa15.61■□□□□ 0.09
EDEM3-202ENST00000367512 CHD1LQ86WJ1 897 aa15.61■□□□□ 0.09
EDEM3-202ENST00000367512 GNL3LQ9NVN8 582 aaKnown RBP15.61■□□□□ 0.09
EDEM3-202ENST00000367512 PRPF4BQ13523 1007 aaKnown RBP15.61■□□□□ 0.09
EDEM3-202ENST00000367512 IMMTQ16891 758 aaKnown RBP15.61■□□□□ 0.09
EDEM3-202ENST00000367512 TDRD12Q587J7 1177 aaKnown RBP15.61■□□□□ 0.09
EDEM3-202ENST00000367512 ISM2Q6H9L7 571 aa15.61■□□□□ 0.09
EDEM3-202ENST00000367512 COMMD10Q9Y6G5 202 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 MICALCLQ6ZW33 695 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 CCDC7Q96M83 1385 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 UACAQ9BZF9 1416 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 STRN4Q9NRL3 753 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 CCDC160A6NGH7 325 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 GCOM1H8Y6P7 765 aaPredicted RBP15.6■□□□□ 0.09
EDEM3-202ENST00000367512 MYZAPP0CAP1 466 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 ZMYND15Q9H091 742 aa15.6■□□□□ 0.09
EDEM3-202ENST00000367512 BIN1O00499 593 aa15.59■□□□□ 0.09
EDEM3-202ENST00000367512 HDGFL1Q5TGJ6 251 aa15.59■□□□□ 0.09
EDEM3-202ENST00000367512 SPTY2D1Q68D10 685 aaPredicted RBP15.59■□□□□ 0.09
EDEM3-202ENST00000367512 AAMPQ13685 434 aa15.59■□□□□ 0.09
EDEM3-202ENST00000367512 GDPD2Q9HCC8 539 aa15.59■□□□□ 0.09
EDEM3-202ENST00000367512 PPM1EQ8WY54 764 aa15.58■□□□□ 0.09
EDEM3-202ENST00000367512 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.09
EDEM3-202ENST00000367512 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.09
EDEM3-202ENST00000367512 GTF2A1P52655 376 aaPredicted RBP15.58■□□□□ 0.09
EDEM3-202ENST00000367512 CDKL5O76039 1030 aa15.58■□□□□ 0.08
EDEM3-202ENST00000367512 CETN2P41208 172 aa15.58■□□□□ 0.08
EDEM3-202ENST00000367512 HOOK3Q86VS8 718 aa15.58■□□□□ 0.08
EDEM3-202ENST00000367512 POTEJP0CG39 1038 aa15.58■□□□□ 0.08
EDEM3-202ENST00000367512 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.08
EDEM3-202ENST00000367512 PAXIP1Q6ZW49 1069 aaPredicted RBP15.58■□□□□ 0.08
EDEM3-202ENST00000367512 APBB1IPQ7Z5R6 666 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms