RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 CASZ1Q86V15 1759 aa14.15□□□□□ -0.14
NUP43-203ENST00000367404 TOM1L2Q6ZVM7 507 aa14.15□□□□□ -0.14
NUP43-203ENST00000367404 CDCA7Q9BWT1 371 aaPredicted RBP14.15□□□□□ -0.14
NUP43-203ENST00000367404 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
NUP43-203ENST00000367404 METRNQ9UJH8 293 aa14.15□□□□□ -0.14
NUP43-203ENST00000367404 NFAT5O94916 1531 aa14.15□□□□□ -0.14
NUP43-203ENST00000367404 EVC2Q86UK5 1308 aa14.15□□□□□ -0.15
NUP43-203ENST00000367404 PTF1AQ7RTS3 328 aa14.14□□□□□ -0.15
NUP43-203ENST00000367404 MARCH10Q8NA82 808 aaPredicted RBP14.14□□□□□ -0.15
NUP43-203ENST00000367404 TTC21BQ7Z4L5 1316 aa14.14□□□□□ -0.15
NUP43-203ENST00000367404 ZBTB7CA1YPR0 619 aa14.13□□□□□ -0.15
NUP43-203ENST00000367404 TTLL13PA6NNM8 815 aa14.13□□□□□ -0.15
NUP43-203ENST00000367404 C7P10643 843 aa14.13□□□□□ -0.15
NUP43-203ENST00000367404 KCNH5Q8NCM2 988 aa14.13□□□□□ -0.15
NUP43-203ENST00000367404 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
NUP43-203ENST00000367404 TTC21AQ8NDW8 1320 aa14.13□□□□□ -0.15
NUP43-203ENST00000367404 YY1P25490 414 aa14.12□□□□□ -0.15
NUP43-203ENST00000367404 GSE1Q14687 1217 aa14.12□□□□□ -0.15
NUP43-203ENST00000367404 L3MBTL2Q969R5 705 aa14.12□□□□□ -0.15
NUP43-203ENST00000367404 CARD10Q9BWT7 1032 aa14.12□□□□□ -0.15
NUP43-203ENST00000367404 PPP1R1BQ9UD71 204 aaPredicted RBP14.12□□□□□ -0.15
NUP43-203ENST00000367404 TNS2Q63HR2 1409 aa14.12□□□□□ -0.15
NUP43-203ENST00000367404 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
NUP43-203ENST00000367404 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
NUP43-203ENST00000367404 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
NUP43-203ENST00000367404 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
NUP43-203ENST00000367404 USP54Q70EL1 1684 aa14.09□□□□□ -0.15
NUP43-203ENST00000367404 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
NUP43-203ENST00000367404 USP31Q70CQ4 1352 aa14.09□□□□□ -0.15
NUP43-203ENST00000367404 PDGFDQ9GZP0 370 aaPredicted RBP14.08□□□□□ -0.16
NUP43-203ENST00000367404 PTGER2P43116 358 aa14.07□□□□□ -0.16
NUP43-203ENST00000367404 TXNRD1Q16881 649 aa14.07□□□□□ -0.16
NUP43-203ENST00000367404 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
NUP43-203ENST00000367404 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
NUP43-203ENST00000367404 CD163L1Q9NR16 1453 aa14.06□□□□□ -0.16
NUP43-203ENST00000367404 CSB-PGBD3P0DP91 1061 aa14.06□□□□□ -0.16
NUP43-203ENST00000367404 MYOM1P52179 1685 aa14.06□□□□□ -0.16
NUP43-203ENST00000367404 NHSQ6T4R5 1651 aa14.06□□□□□ -0.16
NUP43-203ENST00000367404 ERBB3P21860 1342 aa14.06□□□□□ -0.16
NUP43-203ENST00000367404 PAPPAQ13219 1627 aa14.05□□□□□ -0.16
NUP43-203ENST00000367404 EXOC5O00471 708 aa14.05□□□□□ -0.16
NUP43-203ENST00000367404 SOX12O15370 315 aa14.05□□□□□ -0.16
NUP43-203ENST00000367404 ZBTB7AO95365 584 aa14.05□□□□□ -0.16
NUP43-203ENST00000367404 SLC15A2Q16348 729 aa14.05□□□□□ -0.16
NUP43-203ENST00000367404 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
NUP43-203ENST00000367404 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
NUP43-203ENST00000367404 UTRNP46939 3433 aa14.04□□□□□ -0.16
NUP43-203ENST00000367404 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
NUP43-203ENST00000367404 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
NUP43-203ENST00000367404 PCDHB8Q9UN66 801 aa14.03□□□□□ -0.16
NUP43-203ENST00000367404 TRIM35Q9UPQ4 493 aa14.03□□□□□ -0.16
NUP43-203ENST00000367404 RGPD5Q99666 1765 aa14.03□□□□□ -0.16
NUP43-203ENST00000367404 TMEM106CQ9BVX2 250 aa14.02□□□□□ -0.17
NUP43-203ENST00000367404 MTFR1LQ9H019 292 aa14.01□□□□□ -0.17
NUP43-203ENST00000367404 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
NUP43-203ENST00000367404 MAP3K5Q99683 1374 aa14□□□□□ -0.17
NUP43-203ENST00000367404 POTEJP0CG39 1038 aa14□□□□□ -0.17
NUP43-203ENST00000367404 CHRM1P11229 460 aaPredicted RBP14□□□□□ -0.17
NUP43-203ENST00000367404 IL2RBP14784 551 aa14□□□□□ -0.17
NUP43-203ENST00000367404 NME9Q86XW9 330 aa14□□□□□ -0.17
NUP43-203ENST00000367404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
NUP43-203ENST00000367404 SYT17Q9BSW7 474 aa13.99□□□□□ -0.17
NUP43-203ENST00000367404 FHDC1Q9C0D6 1143 aaPredicted RBP13.99□□□□□ -0.17
NUP43-203ENST00000367404 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
NUP43-203ENST00000367404 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
NUP43-203ENST00000367404 NLRP2Q9NX02 1062 aa13.98□□□□□ -0.17
NUP43-203ENST00000367404 A0A1W2PP64 1363 aa13.97□□□□□ -0.17
NUP43-203ENST00000367404 CIZ1Q9ULV3 898 aaPredicted RBP13.97□□□□□ -0.17
NUP43-203ENST00000367404 NEUROD1Q13562 356 aa13.96□□□□□ -0.17
NUP43-203ENST00000367404 ZNF827Q17R98 1081 aa13.96□□□□□ -0.17
NUP43-203ENST00000367404 HDGFL2Q7Z4V5 671 aaPredicted RBP13.96□□□□□ -0.17
NUP43-203ENST00000367404 PUS7Q96PZ0 661 aaKnown RBP13.96□□□□□ -0.17
NUP43-203ENST00000367404 ZNF784Q8NCA9 323 aaPredicted RBP13.95□□□□□ -0.18
NUP43-203ENST00000367404 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
NUP43-203ENST00000367404 LRRC4BQ9NT99 713 aa13.95□□□□□ -0.18
NUP43-203ENST00000367404 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
NUP43-203ENST00000367404 LTN1O94822 1766 aa13.95□□□□□ -0.18
NUP43-203ENST00000367404 BTAF1O14981 1849 aa13.94□□□□□ -0.18
NUP43-203ENST00000367404 IER5LQ5T953 404 aa13.94□□□□□ -0.18
NUP43-203ENST00000367404 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
NUP43-203ENST00000367404 ARXQ96QS3 562 aa13.94□□□□□ -0.18
NUP43-203ENST00000367404 SLC12A5Q9H2X9 1139 aa13.94□□□□□ -0.18
NUP43-203ENST00000367404 TMC1Q8TDI8 760 aa13.93□□□□□ -0.18
NUP43-203ENST00000367404 IP6K1Q92551 441 aa13.93□□□□□ -0.18
NUP43-203ENST00000367404 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
NUP43-203ENST00000367404 FAM208AQ9UK61 1670 aaKnown RBP13.93□□□□□ -0.18
NUP43-203ENST00000367404 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
NUP43-203ENST00000367404 NSD2O96028 1365 aa13.92□□□□□ -0.18
NUP43-203ENST00000367404 COL24A1Q17RW2 1714 aa13.91□□□□□ -0.18
NUP43-203ENST00000367404 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
NUP43-203ENST00000367404 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
NUP43-203ENST00000367404 ANKRD36BQ8N2N9 1353 aa13.91□□□□□ -0.18
NUP43-203ENST00000367404 SEC24BO95487 1268 aa13.9□□□□□ -0.18
NUP43-203ENST00000367404 PNPLA7Q6ZV29 1317 aa13.9□□□□□ -0.19
NUP43-203ENST00000367404 TESK2Q96S53 571 aa13.89□□□□□ -0.19
NUP43-203ENST00000367404 MEGF6O75095 1541 aa13.89□□□□□ -0.19
NUP43-203ENST00000367404 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
NUP43-203ENST00000367404 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
NUP43-203ENST00000367404 HOXC9P31274 260 aa13.88□□□□□ -0.19
NUP43-203ENST00000367404 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms