RNA–Protein interactions for RNA: ENST00000366959.4

RPS6KC1-201, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RPS6KC1, Length 5,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-201ENST00000366959 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
RPS6KC1-201ENST00000366959 NME9Q86XW9 330 aa16.9■□□□□ 0.3
RPS6KC1-201ENST00000366959 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.36e-7■■□□□ 12.1
RPS6KC1-201ENST00000366959 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
RPS6KC1-201ENST00000366959 SSFA2P28290 1259 aa16.89■□□□□ 0.29
RPS6KC1-201ENST00000366959 NOM1Q5C9Z4 860 aaKnown RBP16.89■□□□□ 0.29
RPS6KC1-201ENST00000366959 PIBF1Q8WXW3 757 aa16.89■□□□□ 0.29
RPS6KC1-201ENST00000366959 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
RPS6KC1-201ENST00000366959 PPFIBP1Q86W92 1011 aa16.89■□□□□ 0.29
RPS6KC1-201ENST00000366959 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
RPS6KC1-201ENST00000366959 ERCC4Q92889 916 aaPredicted RBP16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 ZHX3Q9H4I2 956 aa16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 KRT18P05783 430 aaKnown RBP16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 PRPF40BQ6NWY9 871 aaKnown RBP16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 ZSCAN30Q86W11 494 aa16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 MX1P20591 662 aa16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
RPS6KC1-201ENST00000366959 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 CCDC69A6NI79 296 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 SNAPC4Q5SXM2 1469 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 CEP57L1Q8IYX8 460 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 CCP110O43303 1012 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 CCAR1Q8IX12 1150 aaKnown RBP16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
RPS6KC1-201ENST00000366959 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 ZSCAN31Q96LW9 406 aaPredicted RBP16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 NACAP1Q9BZK3 213 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 GDPD2Q9HCC8 539 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 CFAP45Q9UL16 551 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 ADGRF5Q8IZF2 1346 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 CCDC66A2RUB6 948 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 ZNHIT6Q9NWK9 470 aaKnown RBP16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 GNAT3A8MTJ3 354 aa16.86■□□□□ 0.29
RPS6KC1-201ENST00000366959 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 TRIM27P14373 513 aa16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 MAP3K11Q16584 847 aa16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 CWC15Q9P013 229 aaKnown RBP16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
RPS6KC1-201ENST00000366959 HECW1Q76N89 1606 aa16.84■□□□□ 0.29
RPS6KC1-201ENST00000366959 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
RPS6KC1-201ENST00000366959 FBLN1P23142 703 aa16.84■□□□□ 0.29
RPS6KC1-201ENST00000366959 TANGO6Q9C0B7 1094 aa16.84■□□□□ 0.29
RPS6KC1-201ENST00000366959 DEF6Q9H4E7 631 aa16.84■□□□□ 0.29
RPS6KC1-201ENST00000366959 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
RPS6KC1-201ENST00000366959 IGHDP01880 384 aa16.83■□□□□ 0.29
RPS6KC1-201ENST00000366959 TDO2P48775 406 aa16.83■□□□□ 0.29
RPS6KC1-201ENST00000366959 GUCY1B3Q02153 619 aa16.83■□□□□ 0.28
RPS6KC1-201ENST00000366959 LEKR1Q6ZMV7 388 aa16.83■□□□□ 0.28
RPS6KC1-201ENST00000366959 KIF1BPQ96EK5 621 aa16.83■□□□□ 0.28
RPS6KC1-201ENST00000366959 GNL3LQ9NVN8 582 aaKnown RBP16.83■□□□□ 0.28
RPS6KC1-201ENST00000366959 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
RPS6KC1-201ENST00000366959 SSBP05455 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 PIP4K2AP48426 406 aaPredicted RBP16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 CCDC8Q9H0W5 538 aaPredicted RBP16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 CFAP100Q494V2 611 aa16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
RPS6KC1-201ENST00000366959 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 KRT32Q14532 448 aa16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 ABCF2Q9UG63 623 aa16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 GLRX3O76003 335 aaKnown RBP16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 ABCC5O15440 1437 aa16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 FAM193AP78312 1265 aa16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 USP25Q9UHP3 1055 aa16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
RPS6KC1-201ENST00000366959 CKAP2LQ8IYA6 745 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 CENPHQ9H3R5 247 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 RAI14Q9P0K7 980 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 CCDC82Q8N4S0 544 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 DACH1Q9UI36 760 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 PCF11O94913 1555 aaKnown RBP16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
RPS6KC1-201ENST00000366959 STIM1Q13586 685 aa16.79■□□□□ 0.28
RPS6KC1-201ENST00000366959 CCDC181Q5TID7 509 aa16.79■□□□□ 0.28
RPS6KC1-201ENST00000366959 FBXO31Q5XUX0 539 aaPredicted RBP16.79■□□□□ 0.28
RPS6KC1-201ENST00000366959 LRP2BPQ9P2M1 347 aa16.79■□□□□ 0.28
RPS6KC1-201ENST00000366959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■■■ 107.6
RPS6KC1-201ENST00000366959 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
RPS6KC1-201ENST00000366959 PDCL2Q8N4E4 241 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms